RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 C16orf45Q96MC5 204 aaPredicted RBP18.21■□□□□ 0.51
VLDLR-202ENST00000382099 HNRNPH2P55795 449 aaKnown RBP18.21■□□□□ 0.51
VLDLR-202ENST00000382099 WWC1Q8IX03 1113 aa18.21■□□□□ 0.51
VLDLR-202ENST00000382099 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.21■□□□□ 0.51
VLDLR-202ENST00000382099 V9GYY5 206 aaPredicted RBP18.21■□□□□ 0.51
VLDLR-202ENST00000382099 MYO5CQ9NQX4 1742 aa18.21■□□□□ 0.5
VLDLR-202ENST00000382099 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
VLDLR-202ENST00000382099 GTF2A1P52655 376 aaPredicted RBP18.2■□□□□ 0.5
VLDLR-202ENST00000382099 RNF216Q9NWF9 866 aaPredicted RBP18.2■□□□□ 0.5
VLDLR-202ENST00000382099 TULP2O00295 520 aa18.19■□□□□ 0.5
VLDLR-202ENST00000382099 NPHP1O15259 732 aa18.19■□□□□ 0.5
VLDLR-202ENST00000382099 SPTLC3Q9NUV7 552 aa18.19■□□□□ 0.5
VLDLR-202ENST00000382099 GDPD2Q9HCC8 539 aa18.19■□□□□ 0.5
VLDLR-202ENST00000382099 SLC52A1Q9NWF4 448 aa18.19■□□□□ 0.5
VLDLR-202ENST00000382099 ZKSCAN2Q63HK3 967 aa18.19■□□□□ 0.5
VLDLR-202ENST00000382099 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
VLDLR-202ENST00000382099 HCLS1P14317 486 aaPredicted RBP18.18■□□□□ 0.5
VLDLR-202ENST00000382099 ANKRD45Q5TZF3 282 aa18.18■□□□□ 0.5
VLDLR-202ENST00000382099 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
VLDLR-202ENST00000382099 TBC1D9Q6ZT07 1266 aa18.18■□□□□ 0.5
VLDLR-202ENST00000382099 KIF18AQ8NI77 898 aa18.18■□□□□ 0.5
VLDLR-202ENST00000382099 IFT57Q9NWB7 429 aa18.17■□□□□ 0.5
VLDLR-202ENST00000382099 LAMC1P11047 1609 aa18.17■□□□□ 0.5
VLDLR-202ENST00000382099 SOX12O15370 315 aa18.17■□□□□ 0.5
VLDLR-202ENST00000382099 CTIFO43310 598 aaKnown RBP18.17■□□□□ 0.5
VLDLR-202ENST00000382099 CNPY4Q8N129 248 aa18.17■□□□□ 0.5
VLDLR-202ENST00000382099 PREX2Q70Z35 1606 aa18.17■□□□□ 0.5
VLDLR-202ENST00000382099 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
VLDLR-202ENST00000382099 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
VLDLR-202ENST00000382099 UNC13BO14795 1591 aa18.16■□□□□ 0.5
VLDLR-202ENST00000382099 RAD51AP2Q09MP3 1159 aa18.16■□□□□ 0.5
VLDLR-202ENST00000382099 GPATCH11Q8N954 259 aa18.16■□□□□ 0.5
VLDLR-202ENST00000382099 CCDC112Q8NEF3 446 aa18.16■□□□□ 0.5
VLDLR-202ENST00000382099 MORC2Q9Y6X9 1032 aaPredicted RBP18.16■□□□□ 0.5
VLDLR-202ENST00000382099 PHF14O94880 888 aa18.16■□□□□ 0.5
VLDLR-202ENST00000382099 C10orf67Q8IYJ2 551 aa18.15■□□□□ 0.5
VLDLR-202ENST00000382099 KIAA1524Q8TCG1 905 aa18.15■□□□□ 0.5
VLDLR-202ENST00000382099 SYCP2Q9BX26 1530 aa18.15■□□□□ 0.5
VLDLR-202ENST00000382099 NOL10Q9BSC4 688 aaKnown RBP18.15■□□□□ 0.5
VLDLR-202ENST00000382099 SMC4Q9NTJ3 1288 aa18.15■□□□□ 0.5
VLDLR-202ENST00000382099 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
VLDLR-202ENST00000382099 PATL2C9JE40 543 aaKnown RBP18.14■□□□□ 0.49
VLDLR-202ENST00000382099 CLGNO14967 610 aa18.14■□□□□ 0.49
VLDLR-202ENST00000382099 PRR29P0C7W0 189 aa18.14■□□□□ 0.49
VLDLR-202ENST00000382099 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
VLDLR-202ENST00000382099 EP400NLQ6ZTU2 488 aa18.14■□□□□ 0.49
VLDLR-202ENST00000382099 RABEP1Q15276 862 aa18.13■□□□□ 0.49
VLDLR-202ENST00000382099 KCNG1Q9UIX4 513 aa18.13■□□□□ 0.49
VLDLR-202ENST00000382099 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
VLDLR-202ENST00000382099 CHD1LQ86WJ1 897 aa18.13■□□□□ 0.49
VLDLR-202ENST00000382099 RASSF4Q9H2L5 321 aa18.13■□□□□ 0.49
VLDLR-202ENST00000382099 CWC22Q9HCG8 908 aaKnown RBP18.13■□□□□ 0.49
VLDLR-202ENST00000382099 TNNT1P13805 278 aa18.12■□□□□ 0.49
VLDLR-202ENST00000382099 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
VLDLR-202ENST00000382099 CYP2E1P05181 493 aaPredicted RBP18.12■□□□□ 0.49
VLDLR-202ENST00000382099 NUTM2DQ5VT03 806 aaPredicted RBP18.12■□□□□ 0.49
VLDLR-202ENST00000382099 EFCC1Q9HA90 598 aa18.12■□□□□ 0.49
VLDLR-202ENST00000382099 MAGI2Q86UL8 1455 aa18.12■□□□□ 0.49
VLDLR-202ENST00000382099 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
VLDLR-202ENST00000382099 FAM184AQ8NB25 1140 aa18.11■□□□□ 0.49
VLDLR-202ENST00000382099 ZDHHC9Q9Y397 364 aa18.11■□□□□ 0.49
VLDLR-202ENST00000382099 GTF3C6Q969F1 213 aa18.11■□□□□ 0.49
VLDLR-202ENST00000382099 ST18O60284 1047 aa18.11■□□□□ 0.49
VLDLR-202ENST00000382099 GOLGA6L6A8MZA4 724 aa18.1■□□□□ 0.49
VLDLR-202ENST00000382099 GYS2P54840 703 aa18.1■□□□□ 0.49
VLDLR-202ENST00000382099 HDAC1Q13547 482 aaPredicted RBP18.1■□□□□ 0.49
VLDLR-202ENST00000382099 IQGAP3Q86VI3 1631 aa18.1■□□□□ 0.49
VLDLR-202ENST00000382099 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
VLDLR-202ENST00000382099 GEMIN8Q9NWZ8 242 aaKnown RBP18.1■□□□□ 0.49
VLDLR-202ENST00000382099 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
VLDLR-202ENST00000382099 TTC37Q6PGP7 1564 aa18.1■□□□□ 0.49
VLDLR-202ENST00000382099 NEK11Q8NG66 645 aa18.1■□□□□ 0.49
VLDLR-202ENST00000382099 UVSSAQ2YD98 709 aa18.09■□□□□ 0.49
VLDLR-202ENST00000382099 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
VLDLR-202ENST00000382099 KCNF1Q9H3M0 494 aa18.09■□□□□ 0.49
VLDLR-202ENST00000382099 WDR7Q9Y4E6 1490 aa18.09■□□□□ 0.49
VLDLR-202ENST00000382099 EIF2AK4Q9P2K8 1649 aaKnown RBP18.08■□□□□ 0.49
VLDLR-202ENST00000382099 SMTNL1A8MU46 457 aa18.08■□□□□ 0.49
VLDLR-202ENST00000382099 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.49
VLDLR-202ENST00000382099 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.49
VLDLR-202ENST00000382099 RNF17Q9BXT8 1623 aaKnown RBP18.08■□□□□ 0.49
VLDLR-202ENST00000382099 POLR3GO15318 223 aaPredicted RBP18.08■□□□□ 0.48
VLDLR-202ENST00000382099 NUCB1Q02818 461 aa18.08■□□□□ 0.48
VLDLR-202ENST00000382099 TPD52L1Q16890 204 aaPredicted RBP18.08■□□□□ 0.48
VLDLR-202ENST00000382099 KMT5BQ4FZB7 885 aa18.08■□□□□ 0.48
VLDLR-202ENST00000382099 ZNF397Q8NF99 534 aaPredicted RBP18.08■□□□□ 0.48
VLDLR-202ENST00000382099 MAST1Q9Y2H9 1570 aa18.08■□□□□ 0.48
VLDLR-202ENST00000382099 KDM4AO75164 1064 aa18.07■□□□□ 0.48
VLDLR-202ENST00000382099 PTGS1P23219 599 aa18.07■□□□□ 0.48
VLDLR-202ENST00000382099 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
VLDLR-202ENST00000382099 TRIM66O15016 1216 aa18.06■□□□□ 0.48
VLDLR-202ENST00000382099 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
VLDLR-202ENST00000382099 CDC45O75419 566 aa18.06■□□□□ 0.48
VLDLR-202ENST00000382099 PSEN1P49768 467 aa18.06■□□□□ 0.48
VLDLR-202ENST00000382099 YY1AP1Q9H869 796 aa18.06■□□□□ 0.48
VLDLR-202ENST00000382099 ARHGAP5Q13017 1502 aa18.06■□□□□ 0.48
VLDLR-202ENST00000382099 TRIM27P14373 513 aa18.05■□□□□ 0.48
VLDLR-202ENST00000382099 TCP11L2Q8N4U5 519 aa18.05■□□□□ 0.48
VLDLR-202ENST00000382099 BANK1Q8NDB2 785 aa18.05■□□□□ 0.48
VLDLR-202ENST00000382099 FAM193AP78312 1265 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms