RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 DZIP1LQ8IYY4 767 aaKnown RBP6.88□□□□□ -1.31
RFC1-202ENST00000381897 MKRN3Q13064 507 aaKnown RBP6.87□□□□□ -1.31
RFC1-202ENST00000381897 MORC1Q86VD1 984 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 STAC3Q96MF2 364 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 SMC4Q9NTJ3 1288 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 ERBINQ96RT1 1412 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 K7ELQ4 463 aaPredicted RBP6.87□□□□□ -1.31
RFC1-202ENST00000381897 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 CCDC94Q9BW85 323 aaPredicted RBP6.87□□□□□ -1.31
RFC1-202ENST00000381897 POGZQ7Z3K3 1410 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 UHRF1BP1Q6BDS2 1440 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 DYTNA2CJ06 578 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 LMNB1P20700 586 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 SKAP1Q86WV1 359 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 CDK13Q14004 1512 aaKnown RBP6.87□□□□□ -1.31
RFC1-202ENST00000381897 CAMSAP2Q08AD1 1489 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 SNAPC4Q5SXM2 1469 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 KLHL40Q2TBA0 621 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 MCTP1Q6DN14 999 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 EXOC8Q8IYI6 725 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 MAP10Q9P2G4 905 aa6.87□□□□□ -1.31
RFC1-202ENST00000381897 SNX21Q969T3 373 aa6.86□□□□□ -1.31
RFC1-202ENST00000381897 RABEP1Q15276 862 aa6.86□□□□□ -1.31
RFC1-202ENST00000381897 PDCL2Q8N4E4 241 aa6.86□□□□□ -1.31
RFC1-202ENST00000381897 CCSER2Q9H7U1 834 aa6.86□□□□□ -1.31
RFC1-202ENST00000381897 URB2Q14146 1524 aaKnown RBP6.86□□□□□ -1.31
RFC1-202ENST00000381897 ABCA10Q8WWZ4 1543 aa6.86□□□□□ -1.31
RFC1-202ENST00000381897 TNNT3P45378 269 aaPredicted RBP6.86□□□□□ -1.31
RFC1-202ENST00000381897 HNRNPMP52272 730 aaKnown RBP eCLIP6.86□□□□□ -1.31
RFC1-202ENST00000381897 TNPO1Q92973 898 aaKnown RBP6.86□□□□□ -1.31
RFC1-202ENST00000381897 KIF20AO95235 890 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 KIF4AO95239 1232 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 ERCC5P28715 1186 aaPredicted RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 E2F4Q16254 413 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 CAVIN1Q6NZI2 390 aaKnown RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 VPS37DQ86XT2 251 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 DRC1Q96MC2 740 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 LARP6Q9BRS8 491 aaKnown RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 MLECQ14165 292 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 PPP2R5AQ15172 486 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 CCDC181Q5TID7 509 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 CPLX3Q8WVH0 158 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 RUNDC1Q96C34 613 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 TSPYL1Q9H0U9 437 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 TSPY26PQ9H489 355 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 EPRSP07814 1512 aaKnown RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 BCAR3O75815 825 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 S100BP04271 92 aaPredicted RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 FAM69CQ0P6D2 419 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 UTP14CQ5TAP6 766 aaKnown RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 FBXW10Q5XX13 1052 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 CAPN10Q9HC96 672 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 ATG3Q9NT62 314 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 KDM5BQ9UGL1 1544 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 FAM184AQ8NB25 1140 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 METTL14Q9HCE5 456 aaKnown RBP6.85□□□□□ -1.31
RFC1-202ENST00000381897 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.85□□□□□ -1.31
RFC1-202ENST00000381897 KIF3AQ9Y496 699 aa6.85□□□□□ -1.31
RFC1-202ENST00000381897 ABCC5O15440 1437 aa6.84□□□□□ -1.31
RFC1-202ENST00000381897 CDC45O75419 566 aa6.84□□□□□ -1.31
RFC1-202ENST00000381897 WDR63Q8IWG1 891 aa6.84□□□□□ -1.31
RFC1-202ENST00000381897 ZSWIM4Q9H7M6 989 aa6.84□□□□□ -1.31
RFC1-202ENST00000381897 RIOK3O14730 519 aaKnown RBP6.84□□□□□ -1.31
RFC1-202ENST00000381897 SMC5Q8IY18 1101 aa6.84□□□□□ -1.31
RFC1-202ENST00000381897 PPP1R9BQ96SB3 815 aa6.84□□□□□ -1.31
RFC1-202ENST00000381897 EID1Q9Y6B2 187 aa6.84□□□□□ -1.31
RFC1-202ENST00000381897 TPD52L2O43399 206 aaKnown RBP6.84□□□□□ -1.32
RFC1-202ENST00000381897 HTATSF1O43719 755 aaKnown RBP6.84□□□□□ -1.32
RFC1-202ENST00000381897 MVPQ14764 893 aaKnown RBP6.84□□□□□ -1.32
RFC1-202ENST00000381897 ZRSR2Q15696 482 aaKnown RBP6.84□□□□□ -1.32
RFC1-202ENST00000381897 DZIP1Q86YF9 867 aaKnown RBP6.84□□□□□ -1.32
RFC1-202ENST00000381897 DRC7Q8IY82 874 aa6.84□□□□□ -1.32
RFC1-202ENST00000381897 DNMBPQ6XZF7 1577 aa6.84□□□□□ -1.32
RFC1-202ENST00000381897 PRDM2Q13029 1718 aa6.84□□□□□ -1.32
RFC1-202ENST00000381897 KDM5CP41229 1560 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 HMGB2P26583 209 aaKnown RBP6.83□□□□□ -1.32
RFC1-202ENST00000381897 ARID4AP29374 1257 aaPredicted RBP6.83□□□□□ -1.32
RFC1-202ENST00000381897 SF3A1Q15459 793 aaKnown RBP6.83□□□□□ -1.32
RFC1-202ENST00000381897 NOL7Q9UMY1 257 aaKnown RBP6.83□□□□□ -1.32
RFC1-202ENST00000381897 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 GPRASP1Q5JY77 1395 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 REC8O95072 547 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
RFC1-202ENST00000381897 C9orf131Q5VYM1 1079 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 ATP6V1DQ9Y5K8 247 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 BIRC2Q13490 618 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 RAB3GAP1Q15042 981 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.83□□□□□ -1.32
RFC1-202ENST00000381897 IGHDP01880 384 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 NECTIN2Q92692 538 aa6.83□□□□□ -1.32
RFC1-202ENST00000381897 GCC1Q96CN9 775 aa6.82□□□□□ -1.32
RFC1-202ENST00000381897 MAGI1Q96QZ7 1491 aaPredicted RBP6.82□□□□□ -1.32
RFC1-202ENST00000381897 MCM2P49736 904 aa6.82□□□□□ -1.32
RFC1-202ENST00000381897 INTS3Q68E01 1043 aaKnown RBP6.82□□□□□ -1.32
RFC1-202ENST00000381897 ANTXR1Q9H6X2 564 aa6.82□□□□□ -1.32
RFC1-202ENST00000381897 ZNF500O60304 480 aaPredicted RBP6.82□□□□□ -1.32
RFC1-202ENST00000381897 VGFO15240 615 aaPredicted RBP6.82□□□□□ -1.32
RFC1-202ENST00000381897 TEX35Q5T0J7 233 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms