RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
DNMT3A-203ENST00000380746 A0A0G2JS52 829 aa13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 IL13P35225 146 aa13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 MAP4K4O95819 1239 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-203ENST00000380746 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-203ENST00000380746 MEIS3Q99687 375 aa13.6□□□□□ -0.23
DNMT3A-203ENST00000380746 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
DNMT3A-203ENST00000380746 INO80Q9ULG1 1556 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-203ENST00000380746 ABCA9Q8IUA7 1624 aa13.6□□□□□ -0.23
DNMT3A-203ENST00000380746 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
DNMT3A-203ENST00000380746 MROH2AA6NES4 1674 aa13.59□□□□□ -0.23
DNMT3A-203ENST00000380746 NSD2O96028 1365 aa13.59□□□□□ -0.23
DNMT3A-203ENST00000380746 USP19O94966 1318 aa13.59□□□□□ -0.23
DNMT3A-203ENST00000380746 G2E3Q7L622 706 aa13.59□□□□□ -0.23
DNMT3A-203ENST00000380746 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
DNMT3A-203ENST00000380746 IQGAP1P46940 1657 aa13.59□□□□□ -0.23
DNMT3A-203ENST00000380746 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
DNMT3A-203ENST00000380746 DTNBO60941 627 aa13.58□□□□□ -0.23
DNMT3A-203ENST00000380746 PRR36Q9H6K5 1346 aa13.58□□□□□ -0.23
DNMT3A-203ENST00000380746 PSME1Q06323 249 aa13.58□□□□□ -0.24
DNMT3A-203ENST00000380746 IL1RAPL2Q9NP60 686 aa13.58□□□□□ -0.24
DNMT3A-203ENST00000380746 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
DNMT3A-203ENST00000380746 IFT57Q9NWB7 429 aa13.58□□□□□ -0.24
DNMT3A-203ENST00000380746 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
DNMT3A-203ENST00000380746 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-203ENST00000380746 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
DNMT3A-203ENST00000380746 NINLQ9Y2I6 1382 aa13.57□□□□□ -0.24
DNMT3A-203ENST00000380746 AIMP1Q12904 312 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-203ENST00000380746 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-203ENST00000380746 HECW2Q9P2P5 1572 aa13.57□□□□□ -0.24
DNMT3A-203ENST00000380746 TBC1D9Q6ZT07 1266 aa13.56□□□□□ -0.24
DNMT3A-203ENST00000380746 PHF23Q9BUL5 403 aaPredicted RBP13.56□□□□□ -0.24
DNMT3A-203ENST00000380746 CT47B1P0C2W7 299 aaPredicted RBP13.56□□□□□ -0.24
DNMT3A-203ENST00000380746 CASC1Q6TDU7 716 aa13.56□□□□□ -0.24
DNMT3A-203ENST00000380746 ADGRB3O60242 1522 aa13.56□□□□□ -0.24
DNMT3A-203ENST00000380746 NUCB1Q02818 461 aa13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 GLI2P10070 1586 aa13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 CHMP5Q9NZZ3 219 aa13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 MROH1Q8NDA8 1641 aa13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 MAP3K19Q56UN5 1328 aa13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 HDAC1Q13547 482 aaPredicted RBP13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
DNMT3A-203ENST00000380746 QRICH2Q9H0J4 1663 aa13.54□□□□□ -0.24
DNMT3A-203ENST00000380746 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
DNMT3A-203ENST00000380746 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-203ENST00000380746 TNRQ92752 1358 aa13.54□□□□□ -0.24
DNMT3A-203ENST00000380746 KCNA6P17658 529 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 GOLGA6L3A6NEY3 463 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 TRAK2O60296 914 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 ANO2Q9NQ90 1003 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 LAMC1P11047 1609 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 ARAP3Q8WWN8 1544 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 EYA1Q99502 592 aa13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-203ENST00000380746 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.24
DNMT3A-203ENST00000380746 TEFQ10587 303 aa13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 FRMPD1Q5SYB0 1578 aa13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 SIRT2Q8IXJ6 389 aa13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 PUS7Q96PZ0 661 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 CDC45O75419 566 aa13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 AAMPQ13685 434 aa13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 MPRIPQ6WCQ1 1025 aa13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-203ENST00000380746 ADGRB1O14514 1584 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 HMMRO75330 724 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 MCM4P33991 863 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 HDGFL1Q5TGJ6 251 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 ROBO2Q9HCK4 1378 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 NEO1Q92859 1461 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 IL16Q14005 1332 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 NUTM1Q86Y26 1132 aa13.51□□□□□ -0.25
DNMT3A-203ENST00000380746 SURF6O75683 361 aaKnown RBP13.5□□□□□ -0.25
DNMT3A-203ENST00000380746 CD2BP2O95400 341 aaKnown RBP13.5□□□□□ -0.25
DNMT3A-203ENST00000380746 PANK2Q9BZ23 570 aa13.5□□□□□ -0.25
DNMT3A-203ENST00000380746 MYOM1P52179 1685 aa13.5□□□□□ -0.25
DNMT3A-203ENST00000380746 GOLGA6L22H0YM25 854 aa13.5□□□□□ -0.25
DNMT3A-203ENST00000380746 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
DNMT3A-203ENST00000380746 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
DNMT3A-203ENST00000380746 PIP4K2AP48426 406 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-203ENST00000380746 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-203ENST00000380746 MCTP1Q6DN14 999 aa13.49□□□□□ -0.25
DNMT3A-203ENST00000380746 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-203ENST00000380746 DDX49Q9Y6V7 483 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-203ENST00000380746 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-203ENST00000380746 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
DNMT3A-203ENST00000380746 SSFA2P28290 1259 aa13.48□□□□□ -0.25
DNMT3A-203ENST00000380746 UPF3BQ9BZI7 483 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-203ENST00000380746 LRRFIP2Q9Y608 721 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-203ENST00000380746 PHAXQ9H814 394 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-203ENST00000380746 CAMSAP1Q5T5Y3 1602 aa13.48□□□□□ -0.25
DNMT3A-203ENST00000380746 KCNJ4P48050 445 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms