RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 AEBP1Q8IUX7 1158 aa15.49■□□□□ 0.07
USP3-202ENST00000380324 HSP90AB2PQ58FF8 381 aa15.49■□□□□ 0.07
USP3-202ENST00000380324 CLUAP1Q96AJ1 413 aa15.49■□□□□ 0.07
USP3-202ENST00000380324 NPHP4O75161 1426 aaPredicted RBP15.49■□□□□ 0.07
USP3-202ENST00000380324 NUTM2GQ5VZR2 741 aa15.48■□□□□ 0.07
USP3-202ENST00000380324 SMC4Q9NTJ3 1288 aa15.48■□□□□ 0.07
USP3-202ENST00000380324 MAP3K19Q56UN5 1328 aa15.47■□□□□ 0.07
USP3-202ENST00000380324 RLBP1P12271 317 aa15.47■□□□□ 0.07
USP3-202ENST00000380324 CENPQQ7L2Z9 268 aaPredicted RBP15.47■□□□□ 0.07
USP3-202ENST00000380324 MARF1Q9Y4F3 1742 aaKnown RBP15.47■□□□□ 0.07
USP3-202ENST00000380324 SULT6B1Q6IMI4 303 aa15.46■□□□□ 0.07
USP3-202ENST00000380324 RGPD1P0DJD0 1748 aa15.46■□□□□ 0.07
USP3-202ENST00000380324 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
USP3-202ENST00000380324 C14orf37Q86TY3 774 aa15.46■□□□□ 0.07
USP3-202ENST00000380324 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
USP3-202ENST00000380324 CT47B1P0C2W7 299 aaPredicted RBP15.45■□□□□ 0.06
USP3-202ENST00000380324 NLRP6P59044 892 aa15.45■□□□□ 0.06
USP3-202ENST00000380324 ADGRL3Q9HAR2 1447 aa15.45■□□□□ 0.06
USP3-202ENST00000380324 FAM83GA6ND36 823 aa15.44■□□□□ 0.06
USP3-202ENST00000380324 SSH1Q8WYL5 1049 aa15.44■□□□□ 0.06
USP3-202ENST00000380324 FLT4P35916 1363 aa15.44■□□□□ 0.06
USP3-202ENST00000380324 FTSJ3Q8IY81 847 aaKnown RBP15.44■□□□□ 0.06
USP3-202ENST00000380324 ABTB2Q8N961 1025 aa15.43■□□□□ 0.06
USP3-202ENST00000380324 SBNO1A3KN83 1393 aa15.43■□□□□ 0.06
USP3-202ENST00000380324 AMPHP49418 695 aa15.43■□□□□ 0.06
USP3-202ENST00000380324 DCTN1Q14203 1278 aa15.43■□□□□ 0.06
USP3-202ENST00000380324 ZKSCAN2Q63HK3 967 aa15.43■□□□□ 0.06
USP3-202ENST00000380324 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
USP3-202ENST00000380324 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
USP3-202ENST00000380324 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
USP3-202ENST00000380324 ESCO1Q5FWF5 840 aa15.41■□□□□ 0.06
USP3-202ENST00000380324 TRIM27P14373 513 aa15.4■□□□□ 0.06
USP3-202ENST00000380324 USP54Q70EL1 1684 aa15.4■□□□□ 0.06
USP3-202ENST00000380324 LTN1O94822 1766 aa15.4■□□□□ 0.06
USP3-202ENST00000380324 MBIPQ9NS73 344 aa15.4■□□□□ 0.06
USP3-202ENST00000380324 IFT57Q9NWB7 429 aa15.4■□□□□ 0.06
USP3-202ENST00000380324 NWD1Q149M9 1564 aa15.4■□□□□ 0.06
USP3-202ENST00000380324 IGHDP01880 384 aa15.39■□□□□ 0.05
USP3-202ENST00000380324 GNAI1P63096 354 aa15.39■□□□□ 0.05
USP3-202ENST00000380324 DZIP1LQ8IYY4 767 aaKnown RBP15.39■□□□□ 0.05
USP3-202ENST00000380324 ARHGEF10O15013 1369 aa15.39■□□□□ 0.05
USP3-202ENST00000380324 NOB1Q9ULX3 412 aaKnown RBP15.39■□□□□ 0.05
USP3-202ENST00000380324 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
USP3-202ENST00000380324 MS4A1P11836 297 aa15.38■□□□□ 0.05
USP3-202ENST00000380324 RGS3P49796 1198 aa15.38■□□□□ 0.05
USP3-202ENST00000380324 MVPQ14764 893 aaKnown RBP15.38■□□□□ 0.05
USP3-202ENST00000380324 KIF16BQ96L93 1317 aa15.38■□□□□ 0.05
USP3-202ENST00000380324 MSH5O43196 834 aa15.38■□□□□ 0.05
USP3-202ENST00000380324 PDE4AP27815 886 aa15.38■□□□□ 0.05
USP3-202ENST00000380324 TSPYL6Q8N831 410 aa15.38■□□□□ 0.05
USP3-202ENST00000380324 ATF7IPQ6VMQ6 1270 aa15.37■□□□□ 0.05
USP3-202ENST00000380324 MCM10Q7L590 875 aa15.37■□□□□ 0.05
USP3-202ENST00000380324 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
USP3-202ENST00000380324 CFAP44Q96MT7 982 aa15.37■□□□□ 0.05
USP3-202ENST00000380324 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
USP3-202ENST00000380324 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
USP3-202ENST00000380324 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
USP3-202ENST00000380324 PSME1Q06323 249 aa15.36■□□□□ 0.05
USP3-202ENST00000380324 HOXC9P31274 260 aa15.35■□□□□ 0.05
USP3-202ENST00000380324 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
USP3-202ENST00000380324 PCDHB15Q9Y5E8 787 aa15.35■□□□□ 0.05
USP3-202ENST00000380324 ALDH1L2Q3SY69 923 aa15.35■□□□□ 0.05
USP3-202ENST00000380324 ORAI2Q96SN7 254 aa15.35■□□□□ 0.05
USP3-202ENST00000380324 EYA1Q99502 592 aa15.35■□□□□ 0.05
USP3-202ENST00000380324 IGSF1Q8N6C5 1336 aa15.35■□□□□ 0.05
USP3-202ENST00000380324 BACH2Q9BYV9 841 aa15.34■□□□□ 0.05
USP3-202ENST00000380324 KDRP35968 1356 aa15.34■□□□□ 0.05
USP3-202ENST00000380324 FOXO3O43524 673 aa15.34■□□□□ 0.05
USP3-202ENST00000380324 TWISTNBQ3B726 338 aaPredicted RBP15.34■□□□□ 0.05
USP3-202ENST00000380324 NPM2Q86SE8 214 aaKnown RBP15.34■□□□□ 0.05
USP3-202ENST00000380324 PROSER2Q86WR7 435 aaPredicted RBP15.34■□□□□ 0.05
USP3-202ENST00000380324 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.05
USP3-202ENST00000380324 VAMP4O75379 141 aa15.33■□□□□ 0.05
USP3-202ENST00000380324 ANP32AP39687 249 aaKnown RBP15.33■□□□□ 0.05
USP3-202ENST00000380324 C8orf58Q8NAV2 365 aa15.33■□□□□ 0.05
USP3-202ENST00000380324 TMEM57Q8N5G2 664 aa15.33■□□□□ 0.04
USP3-202ENST00000380324 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
USP3-202ENST00000380324 AAMPQ13685 434 aa15.32■□□□□ 0.04
USP3-202ENST00000380324 MTHFSDQ2M296 383 aaKnown RBP15.32■□□□□ 0.04
USP3-202ENST00000380324 NFAT5O94916 1531 aa15.32■□□□□ 0.04
USP3-202ENST00000380324 ZNF428Q96B54 188 aa15.32■□□□□ 0.04
USP3-202ENST00000380324 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
USP3-202ENST00000380324 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
USP3-202ENST00000380324 STRCP1A6NGW2 1772 aa15.31■□□□□ 0.04
USP3-202ENST00000380324 KRT24Q2M2I5 525 aa15.31■□□□□ 0.04
USP3-202ENST00000380324 LMOD2Q6P5Q4 547 aa15.31■□□□□ 0.04
USP3-202ENST00000380324 USHBP1Q8N6Y0 703 aa15.3■□□□□ 0.04
USP3-202ENST00000380324 RTL1A6NKG5 1358 aa15.3■□□□□ 0.04
USP3-202ENST00000380324 HSPA2P54652 639 aa15.29■□□□□ 0.04
USP3-202ENST00000380324 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
USP3-202ENST00000380324 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
USP3-202ENST00000380324 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
USP3-202ENST00000380324 CRB1P82279 1406 aa15.28■□□□□ 0.04
USP3-202ENST00000380324 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
USP3-202ENST00000380324 TRPM3Q9HCF6 1732 aaPredicted RBP15.28■□□□□ 0.04
USP3-202ENST00000380324 KIF1AQ12756 1690 aa15.27■□□□□ 0.04
USP3-202ENST00000380324 C1orf167Q5SNV9 1468 aa15.27■□□□□ 0.04
USP3-202ENST00000380324 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.04
USP3-202ENST00000380324 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.03
USP3-202ENST00000380324 CHL1O00533 1208 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms