RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 PNNQ9H307 717 aaKnown RBP25.56■■□□□ 1.68
CLN5-201ENST00000377453 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
CLN5-201ENST00000377453 IL13P35225 146 aa25.55■■□□□ 1.68
CLN5-201ENST00000377453 ZNF692Q9BU19 519 aaPredicted RBP25.55■■□□□ 1.68
CLN5-201ENST00000377453 KRT24Q2M2I5 525 aa25.55■■□□□ 1.68
CLN5-201ENST00000377453 CLTCQ00610 1675 aaKnown RBP25.55■■□□□ 1.68
CLN5-201ENST00000377453 KIF20BQ96Q89 1820 aa25.53■■□□□ 1.68
CLN5-201ENST00000377453 TWISTNBQ3B726 338 aaPredicted RBP25.52■■□□□ 1.68
CLN5-201ENST00000377453 TRAK2O60296 914 aa25.52■■□□□ 1.68
CLN5-201ENST00000377453 XRCC6P12956 609 aaKnown RBP eCLIP25.52■■□□□ 1.68
CLN5-201ENST00000377453 RRAGDQ9NQL2 400 aaPredicted RBP25.51■■□□□ 1.68
CLN5-201ENST00000377453 NUTM2FA1L443 756 aa25.5■■□□□ 1.67
CLN5-201ENST00000377453 AEBP1Q8IUX7 1158 aa25.5■■□□□ 1.67
CLN5-201ENST00000377453 KIF2CQ99661 725 aa25.5■■□□□ 1.67
CLN5-201ENST00000377453 TBC1D9Q6ZT07 1266 aa25.5■■□□□ 1.67
CLN5-201ENST00000377453 RBM25P49756 843 aaKnown RBP25.49■■□□□ 1.67
CLN5-201ENST00000377453 MAP2P11137 1827 aaKnown RBP25.49■■□□□ 1.67
CLN5-201ENST00000377453 GNAI1P63096 354 aa25.49■■□□□ 1.67
CLN5-201ENST00000377453 HSP90AB1P08238 724 aaKnown RBP25.48■■□□□ 1.67
CLN5-201ENST00000377453 IFT57Q9NWB7 429 aa25.48■■□□□ 1.67
CLN5-201ENST00000377453 METP08581 1390 aa25.47■■□□□ 1.67
CLN5-201ENST00000377453 GOLGA6L3A6NEY3 463 aa25.47■■□□□ 1.67
CLN5-201ENST00000377453 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
CLN5-201ENST00000377453 SOX12O15370 315 aa25.47■■□□□ 1.67
CLN5-201ENST00000377453 BMP2KLQ5H9B9 411 aa25.47■■□□□ 1.67
CLN5-201ENST00000377453 RIMS2Q9UQ26 1411 aa25.47■■□□□ 1.67
CLN5-201ENST00000377453 ZNF853P0CG23 659 aa25.47■■□□□ 1.67
CLN5-201ENST00000377453 APBB1O00213 710 aa25.46■■□□□ 1.67
CLN5-201ENST00000377453 C16orf71Q8IYS4 520 aaPredicted RBP25.46■■□□□ 1.67
CLN5-201ENST00000377453 FAM43AQ8N2R8 423 aa25.46■■□□□ 1.67
CLN5-201ENST00000377453 NUDT16Q96DE0 195 aaKnown RBP25.46■■□□□ 1.67
CLN5-201ENST00000377453 CDC42BPGQ6DT37 1551 aa25.45■■□□□ 1.66
CLN5-201ENST00000377453 EIF5BO60841 1220 aaKnown RBP25.45■■□□□ 1.66
CLN5-201ENST00000377453 L1TD1Q5T7N2 865 aaKnown RBP25.45■■□□□ 1.66
CLN5-201ENST00000377453 CPS1P31327 1500 aa25.45■■□□□ 1.66
CLN5-201ENST00000377453 ABCC4O15439 1325 aa25.44■■□□□ 1.66
CLN5-201ENST00000377453 A2ML1A8K2U0 1454 aa25.44■■□□□ 1.66
CLN5-201ENST00000377453 TNPO1Q92973 898 aaKnown RBP25.44■■□□□ 1.66
CLN5-201ENST00000377453 PTCH1Q13635 1447 aa25.44■■□□□ 1.66
CLN5-201ENST00000377453 COG3Q96JB2 828 aa25.44■■□□□ 1.66
CLN5-201ENST00000377453 DDIT3P35638 169 aa25.43■■□□□ 1.66
CLN5-201ENST00000377453 BRPF1P55201 1214 aaPredicted RBP25.43■■□□□ 1.66
CLN5-201ENST00000377453 GSPT1P15170 499 aaKnown RBP25.43■■□□□ 1.66
CLN5-201ENST00000377453 OTUD7AQ8TE49 926 aaPredicted RBP25.43■■□□□ 1.66
CLN5-201ENST00000377453 GCC1Q96CN9 775 aa25.43■■□□□ 1.66
CLN5-201ENST00000377453 FSD2A1L4K1 749 aa25.42■■□□□ 1.66
CLN5-201ENST00000377453 CFAP44Q96MT7 982 aa25.42■■□□□ 1.66
CLN5-201ENST00000377453 ATP7BP35670 1465 aa25.42■■□□□ 1.66
CLN5-201ENST00000377453 MCM10Q7L590 875 aa25.41■■□□□ 1.66
CLN5-201ENST00000377453 CPSF1Q10570 1443 aaKnown RBP25.4■■□□□ 1.66
CLN5-201ENST00000377453 HSP90AA1P07900 732 aaKnown RBP25.4■■□□□ 1.66
CLN5-201ENST00000377453 ARHGAP45Q92619 1136 aa25.4■■□□□ 1.66
CLN5-201ENST00000377453 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
CLN5-201ENST00000377453 SULT6B1Q6IMI4 303 aa25.39■■□□□ 1.66
CLN5-201ENST00000377453 NCOA3Q9Y6Q9 1424 aa25.39■■□□□ 1.66
CLN5-201ENST00000377453 EDC4Q6P2E9 1401 aaKnown RBP25.39■■□□□ 1.65
CLN5-201ENST00000377453 SNX21Q969T3 373 aa25.39■■□□□ 1.65
CLN5-201ENST00000377453 ZNF428Q96B54 188 aa25.39■■□□□ 1.65
CLN5-201ENST00000377453 PRR36Q9H6K5 1346 aa25.38■■□□□ 1.65
CLN5-201ENST00000377453 CALD1Q05682 793 aaKnown RBP25.38■■□□□ 1.65
CLN5-201ENST00000377453 MIS18AQ9NYP9 233 aa25.38■■□□□ 1.65
CLN5-201ENST00000377453 SMARCA5O60264 1052 aaPredicted RBP25.38■■□□□ 1.65
CLN5-201ENST00000377453 GAS2L2Q8NHY3 880 aa25.37■■□□□ 1.65
CLN5-201ENST00000377453 PLEKHM2Q8IWE5 1019 aa25.36■■□□□ 1.65
CLN5-201ENST00000377453 EIF4A2Q14240 407 aaKnown RBP25.35■■□□□ 1.65
CLN5-201ENST00000377453 CCDC61Q9Y6R9 512 aa25.35■■□□□ 1.65
CLN5-201ENST00000377453 CDK12Q9NYV4 1490 aaPredicted RBP25.35■■□□□ 1.65
CLN5-201ENST00000377453 SSFA2P28290 1259 aa25.34■■□□□ 1.65
CLN5-201ENST00000377453 KIF13AQ9H1H9 1805 aa25.34■■□□□ 1.65
CLN5-201ENST00000377453 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
CLN5-201ENST00000377453 API5Q9BZZ5 524 aaKnown RBP25.34■■□□□ 1.65
CLN5-201ENST00000377453 KNDC1Q76NI1 1749 aa25.34■■□□□ 1.65
CLN5-201ENST00000377453 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.65
CLN5-201ENST00000377453 GAS2L3Q86XJ1 694 aa25.33■■□□□ 1.65
CLN5-201ENST00000377453 DDX11L8A8MPP1 907 aa25.33■■□□□ 1.64
CLN5-201ENST00000377453 K7ELQ4 463 aaPredicted RBP25.32■■□□□ 1.64
CLN5-201ENST00000377453 CDC45O75419 566 aa25.32■■□□□ 1.64
CLN5-201ENST00000377453 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
CLN5-201ENST00000377453 DLC1Q96QB1 1528 aa25.31■■□□□ 1.64
CLN5-201ENST00000377453 RAB3GAP1Q15042 981 aa25.31■■□□□ 1.64
CLN5-201ENST00000377453 SETD1AO15047 1707 aaKnown RBP25.31■■□□□ 1.64
CLN5-201ENST00000377453 MEIS3Q99687 375 aa25.31■■□□□ 1.64
CLN5-201ENST00000377453 FOXO3O43524 673 aa25.3■■□□□ 1.64
CLN5-201ENST00000377453 LMOD3Q0VAK6 560 aa25.3■■□□□ 1.64
CLN5-201ENST00000377453 GRPEL1Q9HAV7 217 aa25.29■■□□□ 1.64
CLN5-201ENST00000377453 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
CLN5-201ENST00000377453 DCTPP1Q9H773 170 aa25.28■■□□□ 1.64
CLN5-201ENST00000377453 MSH6P52701 1360 aa25.28■■□□□ 1.64
CLN5-201ENST00000377453 CHMP4BQ9H444 224 aaKnown RBP25.28■■□□□ 1.64
CLN5-201ENST00000377453 NRXN3Q9Y4C0 1643 aa25.27■■□□□ 1.64
CLN5-201ENST00000377453 TTC22Q5TAA0 569 aa25.27■■□□□ 1.64
CLN5-201ENST00000377453 F6X3S4 739 aa25.26■■□□□ 1.63
CLN5-201ENST00000377453 RGS12O14924 1447 aa25.26■■□□□ 1.63
CLN5-201ENST00000377453 CEP85Q6P2H3 762 aa25.26■■□□□ 1.63
CLN5-201ENST00000377453 G2E3Q7L622 706 aa25.25■■□□□ 1.63
CLN5-201ENST00000377453 SLC4A10Q6U841 1118 aa25.24■■□□□ 1.63
CLN5-201ENST00000377453 ATP10DQ9P241 1426 aa25.24■■□□□ 1.63
CLN5-201ENST00000377453 ROBO2Q9HCK4 1378 aa25.24■■□□□ 1.63
CLN5-201ENST00000377453 TSHZ3Q63HK5 1081 aa25.24■■□□□ 1.63
CLN5-201ENST00000377453 INTS3Q68E01 1043 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms