RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 IPO8O15397 1037 aaKnown RBP12.8□□□□□ -0.36
USP11-203ENST00000377080 FCHSD2O94868 740 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 ATF3P18847 181 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
USP11-203ENST00000377080 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 SKAP1Q86WV1 359 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
USP11-203ENST00000377080 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 UPF2Q9HAU5 1272 aaKnown RBP12.8□□□□□ -0.36
USP11-203ENST00000377080 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
USP11-203ENST00000377080 FYB1O15117 783 aa12.79□□□□□ -0.36
USP11-203ENST00000377080 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
USP11-203ENST00000377080 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
USP11-203ENST00000377080 NGLY1Q96IV0 654 aa12.79□□□□□ -0.36
USP11-203ENST00000377080 NHSL1Q5SYE7 1610 aa12.78□□□□□ -0.36
USP11-203ENST00000377080 CALD1Q05682 793 aaKnown RBP12.78□□□□□ -0.36
USP11-203ENST00000377080 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
USP11-203ENST00000377080 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
USP11-203ENST00000377080 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
USP11-203ENST00000377080 ADAMTS13Q76LX8 1427 aa12.78□□□□□ -0.36
USP11-203ENST00000377080 RLBP1P12271 317 aa12.77□□□□□ -0.37
USP11-203ENST00000377080 BRINP3Q76B58 766 aa12.77□□□□□ -0.37
USP11-203ENST00000377080 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
USP11-203ENST00000377080 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
USP11-203ENST00000377080 PDZRN3Q9UPQ7 1066 aa12.77□□□□□ -0.37
USP11-203ENST00000377080 TBX22Q9Y458 520 aa12.77□□□□□ -0.37
USP11-203ENST00000377080 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
USP11-203ENST00000377080 SRPK2P78362 688 aaKnown RBP12.76□□□□□ -0.37
USP11-203ENST00000377080 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
USP11-203ENST00000377080 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
USP11-203ENST00000377080 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
USP11-203ENST00000377080 ARHGAP45Q92619 1136 aa12.76□□□□□ -0.37
USP11-203ENST00000377080 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
USP11-203ENST00000377080 RRP7AQ9Y3A4 280 aaKnown RBP12.76□□□□□ -0.37
USP11-203ENST00000377080 KIF16BQ96L93 1317 aa12.76□□□□□ -0.37
USP11-203ENST00000377080 EIF5BO60841 1220 aaKnown RBP12.75□□□□□ -0.37
USP11-203ENST00000377080 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
USP11-203ENST00000377080 EP400Q96L91 3159 aa12.75□□□□□ -0.37
USP11-203ENST00000377080 NRXN3Q9Y4C0 1643 aa12.74□□□□□ -0.37
USP11-203ENST00000377080 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
USP11-203ENST00000377080 POGKQ9P215 609 aa12.74□□□□□ -0.37
USP11-203ENST00000377080 LRP5O75197 1615 aa12.73□□□□□ -0.37
USP11-203ENST00000377080 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
USP11-203ENST00000377080 FTSJ3Q8IY81 847 aaKnown RBP12.73□□□□□ -0.37
USP11-203ENST00000377080 LRRC59Q96AG4 307 aaKnown RBP12.73□□□□□ -0.37
USP11-203ENST00000377080 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
USP11-203ENST00000377080 CDK19Q9BWU1 502 aa12.73□□□□□ -0.37
USP11-203ENST00000377080 PTPRUQ92729 1446 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 PIK3R4Q99570 1358 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 XRN1Q8IZH2 1706 aaKnown RBP12.72□□□□□ -0.37
USP11-203ENST00000377080 ADAMTS2O95450 1211 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 RIPK4P57078 832 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 SSH1Q8WYL5 1049 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 SMC4Q9NTJ3 1288 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
USP11-203ENST00000377080 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
USP11-203ENST00000377080 KNDC1Q76NI1 1749 aa12.71□□□□□ -0.37
USP11-203ENST00000377080 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
USP11-203ENST00000377080 TRIM27P14373 513 aa12.71□□□□□ -0.37
USP11-203ENST00000377080 ANTXR1Q9H6X2 564 aa12.71□□□□□ -0.37
USP11-203ENST00000377080 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
USP11-203ENST00000377080 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
USP11-203ENST00000377080 USP21Q9UK80 565 aa12.7□□□□□ -0.38
USP11-203ENST00000377080 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
USP11-203ENST00000377080 AMOTL2Q9Y2J4 779 aa12.7□□□□□ -0.38
USP11-203ENST00000377080 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
USP11-203ENST00000377080 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
USP11-203ENST00000377080 SEC24BO95487 1268 aa12.69□□□□□ -0.38
USP11-203ENST00000377080 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
USP11-203ENST00000377080 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
USP11-203ENST00000377080 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
USP11-203ENST00000377080 TECPR2O15040 1411 aa12.69□□□□□ -0.38
USP11-203ENST00000377080 DCCP43146 1447 aa12.69□□□□□ -0.38
USP11-203ENST00000377080 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
USP11-203ENST00000377080 GNAI1P63096 354 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 CFAP44Q96MT7 982 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 STK26Q9P289 416 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
USP11-203ENST00000377080 MST1RQ04912 1400 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 MON2Q7Z3U7 1717 aa12.68□□□□□ -0.38
USP11-203ENST00000377080 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
USP11-203ENST00000377080 ZNF853P0CG23 659 aa12.67□□□□□ -0.38
USP11-203ENST00000377080 NUCB1Q02818 461 aa12.67□□□□□ -0.38
USP11-203ENST00000377080 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
USP11-203ENST00000377080 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
USP11-203ENST00000377080 CABP1Q9NZU7 370 aa12.67□□□□□ -0.38
USP11-203ENST00000377080 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
USP11-203ENST00000377080 PTCH1Q13635 1447 aa12.67□□□□□ -0.38
USP11-203ENST00000377080 NALCNQ8IZF0 1738 aa12.67□□□□□ -0.38
USP11-203ENST00000377080 FRAT2O75474 233 aaPredicted RBP12.66□□□□□ -0.38
USP11-203ENST00000377080 RBM25P49756 843 aaKnown RBP12.66□□□□□ -0.38
USP11-203ENST00000377080 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
USP11-203ENST00000377080 SNX21Q969T3 373 aa12.66□□□□□ -0.38
USP11-203ENST00000377080 TNNQ9UQP3 1299 aa12.66□□□□□ -0.38
USP11-203ENST00000377080 AKAP12Q02952 1782 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms