RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 MCM4P33991 863 aa18.26■□□□□ 0.51
MSH5-201ENST00000375703 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
MSH5-201ENST00000375703 RBM25P49756 843 aaKnown RBP18.25■□□□□ 0.51
MSH5-201ENST00000375703 C1orf115Q9H7X2 142 aa18.25■□□□□ 0.51
MSH5-201ENST00000375703 CPSF1Q10570 1443 aaKnown RBP18.24■□□□□ 0.51
MSH5-201ENST00000375703 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
MSH5-201ENST00000375703 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
MSH5-201ENST00000375703 COG3Q96JB2 828 aa18.24■□□□□ 0.51
MSH5-201ENST00000375703 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
MSH5-201ENST00000375703 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
MSH5-201ENST00000375703 NUDT16Q96DE0 195 aaKnown RBP18.23■□□□□ 0.51
MSH5-201ENST00000375703 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
MSH5-201ENST00000375703 MLECQ14165 292 aa18.23■□□□□ 0.51
MSH5-201ENST00000375703 L1TD1Q5T7N2 865 aaKnown RBP18.23■□□□□ 0.51
MSH5-201ENST00000375703 CFAP44Q96MT7 982 aa18.23■□□□□ 0.51
MSH5-201ENST00000375703 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
MSH5-201ENST00000375703 RRS1Q15050 365 aaKnown RBP18.22■□□□□ 0.51
MSH5-201ENST00000375703 AATKQ6ZMQ8 1374 aa18.22■□□□□ 0.51
MSH5-201ENST00000375703 PTCH1Q13635 1447 aa18.22■□□□□ 0.51
MSH5-201ENST00000375703 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
MSH5-201ENST00000375703 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
MSH5-201ENST00000375703 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
MSH5-201ENST00000375703 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.5
MSH5-201ENST00000375703 ABCC4O15439 1325 aa18.2■□□□□ 0.5
MSH5-201ENST00000375703 SIRT2Q8IXJ6 389 aa18.2■□□□□ 0.5
MSH5-201ENST00000375703 SNX21Q969T3 373 aa18.2■□□□□ 0.5
MSH5-201ENST00000375703 API5Q9BZZ5 524 aaKnown RBP18.2■□□□□ 0.5
MSH5-201ENST00000375703 CDK12Q9NYV4 1490 aaPredicted RBP18.19■□□□□ 0.5
MSH5-201ENST00000375703 METP08581 1390 aa18.19■□□□□ 0.5
MSH5-201ENST00000375703 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
MSH5-201ENST00000375703 DCTN1Q14203 1278 aa18.18■□□□□ 0.5
MSH5-201ENST00000375703 AGLP35573 1532 aa18.17■□□□□ 0.5
MSH5-201ENST00000375703 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
MSH5-201ENST00000375703 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
MSH5-201ENST00000375703 TRAK2O60296 914 aa18.17■□□□□ 0.5
MSH5-201ENST00000375703 GZF1Q9H116 711 aaPredicted RBP18.17■□□□□ 0.5
MSH5-201ENST00000375703 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
MSH5-201ENST00000375703 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
MSH5-201ENST00000375703 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
MSH5-201ENST00000375703 FAM43AQ8N2R8 423 aa18.16■□□□□ 0.5
MSH5-201ENST00000375703 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
MSH5-201ENST00000375703 GOLGA6L3A6NEY3 463 aa18.15■□□□□ 0.5
MSH5-201ENST00000375703 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
MSH5-201ENST00000375703 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
MSH5-201ENST00000375703 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
MSH5-201ENST00000375703 HDGFP51858 240 aaKnown RBP18.15■□□□□ 0.5
MSH5-201ENST00000375703 DDIT3P35638 169 aa18.14■□□□□ 0.5
MSH5-201ENST00000375703 CPS1P31327 1500 aa18.14■□□□□ 0.49
MSH5-201ENST00000375703 REREQ9P2R6 1566 aa18.14■□□□□ 0.49
MSH5-201ENST00000375703 KIF2CQ99661 725 aa18.14■□□□□ 0.49
MSH5-201ENST00000375703 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.49
MSH5-201ENST00000375703 NCOA3Q9Y6Q9 1424 aa18.13■□□□□ 0.49
MSH5-201ENST00000375703 ARXQ96QS3 562 aa18.13■□□□□ 0.49
MSH5-201ENST00000375703 DDX11L8A8MPP1 907 aa18.13■□□□□ 0.49
MSH5-201ENST00000375703 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
MSH5-201ENST00000375703 FSD2A1L4K1 749 aa18.12■□□□□ 0.49
MSH5-201ENST00000375703 KIF24Q5T7B8 1368 aa18.11■□□□□ 0.49
MSH5-201ENST00000375703 XRCC6P12956 609 aaKnown RBP eCLIP18.11■□□□□ 0.49
MSH5-201ENST00000375703 CIZ1Q9ULV3 898 aaPredicted RBP18.11■□□□□ 0.49
MSH5-201ENST00000375703 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
MSH5-201ENST00000375703 AEBP1Q8IUX7 1158 aa18.11■□□□□ 0.49
MSH5-201ENST00000375703 DCTPP1Q9H773 170 aa18.11■□□□□ 0.49
MSH5-201ENST00000375703 CDC45O75419 566 aa18.1■□□□□ 0.49
MSH5-201ENST00000375703 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
MSH5-201ENST00000375703 PRR36Q9H6K5 1346 aa18.1■□□□□ 0.49
MSH5-201ENST00000375703 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
MSH5-201ENST00000375703 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
MSH5-201ENST00000375703 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
MSH5-201ENST00000375703 PLEKHM2Q8IWE5 1019 aa18.09■□□□□ 0.49
MSH5-201ENST00000375703 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
MSH5-201ENST00000375703 TSPOAP1O95153 1857 aa18.08■□□□□ 0.49
MSH5-201ENST00000375703 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.49
MSH5-201ENST00000375703 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.49
MSH5-201ENST00000375703 CHL1O00533 1208 aa18.08■□□□□ 0.48
MSH5-201ENST00000375703 CD2BP2O95400 341 aaKnown RBP18.08■□□□□ 0.48
MSH5-201ENST00000375703 KRT24Q2M2I5 525 aa18.08■□□□□ 0.48
MSH5-201ENST00000375703 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
MSH5-201ENST00000375703 TTC21BQ7Z4L5 1316 aa18.08■□□□□ 0.48
MSH5-201ENST00000375703 K7ELQ4 463 aaPredicted RBP18.07■□□□□ 0.48
MSH5-201ENST00000375703 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
MSH5-201ENST00000375703 DIP2BQ9P265 1576 aa18.07■□□□□ 0.48
MSH5-201ENST00000375703 MCM10Q7L590 875 aa18.07■□□□□ 0.48
MSH5-201ENST00000375703 TECPR2O15040 1411 aa18.07■□□□□ 0.48
MSH5-201ENST00000375703 EIF5BO60841 1220 aaKnown RBP18.07■□□□□ 0.48
MSH5-201ENST00000375703 ANKRD44Q8N8A2 993 aa18.07■□□□□ 0.48
MSH5-201ENST00000375703 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
MSH5-201ENST00000375703 GBP4Q96PP9 640 aa18.07■□□□□ 0.48
MSH5-201ENST00000375703 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
MSH5-201ENST00000375703 RAB3GAP1Q15042 981 aa18.06■□□□□ 0.48
MSH5-201ENST00000375703 RPAP2Q8IXW5 612 aaPredicted RBP18.06■□□□□ 0.48
MSH5-201ENST00000375703 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
MSH5-201ENST00000375703 C16orf71Q8IYS4 520 aaPredicted RBP18.06■□□□□ 0.48
MSH5-201ENST00000375703 ACEP12821 1306 aa18.05■□□□□ 0.48
MSH5-201ENST00000375703 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
MSH5-201ENST00000375703 HSP90AB2PQ58FF8 381 aa18.04■□□□□ 0.48
MSH5-201ENST00000375703 TTC22Q5TAA0 569 aa18.04■□□□□ 0.48
MSH5-201ENST00000375703 C3P01024 1663 aa18.04■□□□□ 0.48
MSH5-201ENST00000375703 MRE11P49959 708 aa18.04■□□□□ 0.48
MSH5-201ENST00000375703 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
MSH5-201ENST00000375703 PANK2Q9BZ23 570 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms