RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
CUL4A-203ENST00000375441 PHACTR3Q96KR7 559 aa16.09■□□□□ 0.17
CUL4A-203ENST00000375441 VAMP4O75379 141 aa16.08■□□□□ 0.16
CUL4A-203ENST00000375441 LAMC1P11047 1609 aa16.07■□□□□ 0.16
CUL4A-203ENST00000375441 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
CUL4A-203ENST00000375441 RNF214Q8ND24 703 aa16.07■□□□□ 0.16
CUL4A-203ENST00000375441 POLKQ9UBT6 870 aa16.07■□□□□ 0.16
CUL4A-203ENST00000375441 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
CUL4A-203ENST00000375441 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
CUL4A-203ENST00000375441 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
CUL4A-203ENST00000375441 MCM10Q7L590 875 aa16.06■□□□□ 0.16
CUL4A-203ENST00000375441 ARHGAP45Q92619 1136 aa16.06■□□□□ 0.16
CUL4A-203ENST00000375441 RBM25P49756 843 aaKnown RBP16.06■□□□□ 0.16
CUL4A-203ENST00000375441 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
CUL4A-203ENST00000375441 ZNF518AQ6AHZ1 1483 aa16.06■□□□□ 0.16
CUL4A-203ENST00000375441 ERC2O15083 957 aa16.05■□□□□ 0.16
CUL4A-203ENST00000375441 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
CUL4A-203ENST00000375441 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
CUL4A-203ENST00000375441 CWC22Q9HCG8 908 aaKnown RBP16.05■□□□□ 0.16
CUL4A-203ENST00000375441 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
CUL4A-203ENST00000375441 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
CUL4A-203ENST00000375441 CLTCL1P53675 1640 aa16.05■□□□□ 0.16
CUL4A-203ENST00000375441 BAG4O95429 457 aaKnown RBP16.04■□□□□ 0.16
CUL4A-203ENST00000375441 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
CUL4A-203ENST00000375441 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
CUL4A-203ENST00000375441 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
CUL4A-203ENST00000375441 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
CUL4A-203ENST00000375441 CLCN1P35523 988 aa16.04■□□□□ 0.16
CUL4A-203ENST00000375441 MYOM2P54296 1465 aa16.04■□□□□ 0.16
CUL4A-203ENST00000375441 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
CUL4A-203ENST00000375441 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
CUL4A-203ENST00000375441 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
CUL4A-203ENST00000375441 GOLGA6L4A6NEF3 574 aa16.03■□□□□ 0.16
CUL4A-203ENST00000375441 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
CUL4A-203ENST00000375441 PHF14O94880 888 aa16.03■□□□□ 0.16
CUL4A-203ENST00000375441 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.03■□□□□ 0.16
CUL4A-203ENST00000375441 PLEKHF1Q96S99 279 aa16.03■□□□□ 0.16
CUL4A-203ENST00000375441 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
CUL4A-203ENST00000375441 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
CUL4A-203ENST00000375441 R3HCC1Q9Y3T6 440 aaKnown RBP16.02■□□□□ 0.16
CUL4A-203ENST00000375441 NPATQ14207 1427 aa16.02■□□□□ 0.15
CUL4A-203ENST00000375441 EXOC6BQ9Y2D4 811 aa16.02■□□□□ 0.15
CUL4A-203ENST00000375441 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.15
CUL4A-203ENST00000375441 GNAI2P04899 355 aa16.01■□□□□ 0.15
CUL4A-203ENST00000375441 TTC22Q5TAA0 569 aa16.01■□□□□ 0.15
CUL4A-203ENST00000375441 FAM13BQ9NYF5 915 aa16.01■□□□□ 0.15
CUL4A-203ENST00000375441 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
CUL4A-203ENST00000375441 F6X3S4 739 aa16■□□□□ 0.15
CUL4A-203ENST00000375441 WASLO00401 505 aaPredicted RBP15.99■□□□□ 0.15
CUL4A-203ENST00000375441 GNAI3P08754 354 aa15.99■□□□□ 0.15
CUL4A-203ENST00000375441 ZFYVE16Q7Z3T8 1539 aa15.99■□□□□ 0.15
CUL4A-203ENST00000375441 ZSCAN30Q86W11 494 aa15.99■□□□□ 0.15
CUL4A-203ENST00000375441 MBD3O95983 291 aa15.99■□□□□ 0.15
CUL4A-203ENST00000375441 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
CUL4A-203ENST00000375441 CCT4P50991 539 aaKnown RBP15.98■□□□□ 0.15
CUL4A-203ENST00000375441 SDSP20132 328 aa15.98■□□□□ 0.15
CUL4A-203ENST00000375441 FGD1P98174 961 aa15.98■□□□□ 0.15
CUL4A-203ENST00000375441 KRT24Q2M2I5 525 aa15.98■□□□□ 0.15
CUL4A-203ENST00000375441 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
CUL4A-203ENST00000375441 LRRCC1Q9C099 1032 aa15.98■□□□□ 0.15
CUL4A-203ENST00000375441 UBTFL1P0CB47 393 aaPredicted RBP15.97■□□□□ 0.15
CUL4A-203ENST00000375441 MCM2P49736 904 aa15.97■□□□□ 0.15
CUL4A-203ENST00000375441 MEIS3Q99687 375 aa15.97■□□□□ 0.15
CUL4A-203ENST00000375441 TPM2P07951 284 aa15.97■□□□□ 0.15
CUL4A-203ENST00000375441 MAP3K4Q9Y6R4 1608 aa15.97■□□□□ 0.15
CUL4A-203ENST00000375441 SURF6O75683 361 aaKnown RBP15.97■□□□□ 0.15
CUL4A-203ENST00000375441 NUTM2GQ5VZR2 741 aa15.97■□□□□ 0.15
CUL4A-203ENST00000375441 DCTPP1Q9H773 170 aa15.97■□□□□ 0.15
CUL4A-203ENST00000375441 EID1Q9Y6B2 187 aa15.97■□□□□ 0.15
CUL4A-203ENST00000375441 TET3O43151 1660 aa15.96■□□□□ 0.15
CUL4A-203ENST00000375441 SYCE3A1L190 88 aa15.96■□□□□ 0.15
CUL4A-203ENST00000375441 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
CUL4A-203ENST00000375441 ANKRD44Q8N8A2 993 aa15.96■□□□□ 0.15
CUL4A-203ENST00000375441 CHAF1AQ13111 956 aaPredicted RBP15.96■□□□□ 0.14
CUL4A-203ENST00000375441 AEBP1Q8IUX7 1158 aa15.96■□□□□ 0.14
CUL4A-203ENST00000375441 DRC7Q8IY82 874 aa15.96■□□□□ 0.14
CUL4A-203ENST00000375441 DIAPH3Q9NSV4 1193 aa15.96■□□□□ 0.14
CUL4A-203ENST00000375441 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
CUL4A-203ENST00000375441 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
CUL4A-203ENST00000375441 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
CUL4A-203ENST00000375441 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
CUL4A-203ENST00000375441 UPF3BQ9BZI7 483 aaKnown RBP15.95■□□□□ 0.14
CUL4A-203ENST00000375441 RBM10P98175 930 aaKnown RBP15.95■□□□□ 0.14
CUL4A-203ENST00000375441 IL1RAPL2Q9NP60 686 aa15.95■□□□□ 0.14
CUL4A-203ENST00000375441 MPNDQ8N594 471 aa15.94■□□□□ 0.14
CUL4A-203ENST00000375441 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
CUL4A-203ENST00000375441 UHRF1BP1LA0JNW5 1464 aa15.94■□□□□ 0.14
CUL4A-203ENST00000375441 OTUD7AQ8TE49 926 aaPredicted RBP15.94■□□□□ 0.14
CUL4A-203ENST00000375441 YTHDC2Q9H6S0 1430 aaKnown RBP15.94■□□□□ 0.14
CUL4A-203ENST00000375441 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
CUL4A-203ENST00000375441 CCDC39Q9UFE4 941 aa15.94■□□□□ 0.14
CUL4A-203ENST00000375441 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
CUL4A-203ENST00000375441 NLRP6P59044 892 aa15.93■□□□□ 0.14
CUL4A-203ENST00000375441 CSPP1Q1MSJ5 1256 aa15.93■□□□□ 0.14
CUL4A-203ENST00000375441 NAP1L2Q9ULW6 460 aaPredicted RBP15.93■□□□□ 0.14
CUL4A-203ENST00000375441 SMC3Q9UQE7 1217 aa15.93■□□□□ 0.14
CUL4A-203ENST00000375441 ATP6V1DQ9Y5K8 247 aa15.93■□□□□ 0.14
CUL4A-203ENST00000375441 CHD1O14646 1710 aa15.93■□□□□ 0.14
CUL4A-203ENST00000375441 MAP4K4O95819 1239 aaPredicted RBP15.93■□□□□ 0.14
CUL4A-203ENST00000375441 RRP9O43818 475 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms