RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 LEKR1Q6ZMV7 388 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 NUDT16Q96DE0 195 aaKnown RBP8.02□□□□□ -1.13
CHD6-203ENST00000373233 ATF3P18847 181 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 NUTM2GQ5VZR2 741 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 FOXD4L1Q9NU39 408 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 DDX49Q9Y6V7 483 aaKnown RBP8.02□□□□□ -1.13
CHD6-203ENST00000373233 HMGB1P09429 215 aaKnown RBP8.02□□□□□ -1.13
CHD6-203ENST00000373233 GPATCH11Q8N954 259 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 ZMYM4Q5VZL5 1548 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 HSP90B2PQ58FF3 399 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 ANKRD36BQ8N2N9 1353 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 GIMAP7Q8NHV1 300 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 USP8P40818 1118 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 RIPK4P57078 832 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 PLIN1O60240 522 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 CCDC173Q0VFZ6 552 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 KIF13AQ9H1H9 1805 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 PPIP5K1Q6PFW1 1433 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 HMOX1P09601 288 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 KIF3AQ9Y496 699 aa8.01□□□□□ -1.13
CHD6-203ENST00000373233 ESPNB1AK53 854 aa8□□□□□ -1.13
CHD6-203ENST00000373233 VWDEQ8N2E2 1590 aa8□□□□□ -1.13
CHD6-203ENST00000373233 CENPQQ7L2Z9 268 aaPredicted RBP8□□□□□ -1.13
CHD6-203ENST00000373233 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
CHD6-203ENST00000373233 DNAJC2Q99543 621 aaKnown RBP8□□□□□ -1.13
CHD6-203ENST00000373233 SETBP1Q9Y6X0 1596 aa8□□□□□ -1.13
CHD6-203ENST00000373233 KCNJ4P48050 445 aa8□□□□□ -1.13
CHD6-203ENST00000373233 TPM4P67936 248 aa8□□□□□ -1.13
CHD6-203ENST00000373233 AXDND1Q5T1B0 1012 aaPredicted RBP8□□□□□ -1.13
CHD6-203ENST00000373233 ACBD3Q9H3P7 528 aa8□□□□□ -1.13
CHD6-203ENST00000373233 PIK3C2BO00750 1634 aa8□□□□□ -1.13
CHD6-203ENST00000373233 RRP12Q5JTH9 1297 aaKnown RBP8□□□□□ -1.13
CHD6-203ENST00000373233 PMFBP1Q8TBY8 1022 aa8□□□□□ -1.13
CHD6-203ENST00000373233 IFT57Q9NWB7 429 aa8□□□□□ -1.13
CHD6-203ENST00000373233 RWDD1Q9H446 243 aaPredicted RBP8□□□□□ -1.13
CHD6-203ENST00000373233 CCDC9Q9Y3X0 531 aaKnown RBP8□□□□□ -1.13
CHD6-203ENST00000373233 ARHGAP31Q2M1Z3 1444 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 TPM3P06753 285 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 FGD1P98174 961 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 CALCOCO1Q9P1Z2 691 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
CHD6-203ENST00000373233 FRMPD1Q5SYB0 1578 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
CHD6-203ENST00000373233 AMOTL2Q9Y2J4 779 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 TCP11L2Q8N4U5 519 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 CCDC61Q9Y6R9 512 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 CRBNQ96SW2 442 aa7.99□□□□□ -1.13
CHD6-203ENST00000373233 ZNF692Q9BU19 519 aaPredicted RBP7.99□□□□□ -1.13
CHD6-203ENST00000373233 ESCO1Q5FWF5 840 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 ABTB2Q8N961 1025 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 EXOC6Q8TAG9 804 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 NLRP6P59044 892 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 HSP90B1P14625 803 aaKnown RBP7.98□□□□□ -1.13
CHD6-203ENST00000373233 MROH1Q8NDA8 1641 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 MSH5O43196 834 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 PLCD4Q9BRC7 762 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 ITSN1Q15811 1721 aa7.98□□□□□ -1.13
CHD6-203ENST00000373233 CCDC70Q6NSX1 233 aa7.97□□□□□ -1.13
CHD6-203ENST00000373233 STK31Q9BXU1 1019 aa7.97□□□□□ -1.13
CHD6-203ENST00000373233 DYDC1Q8WWB3 177 aa7.97□□□□□ -1.13
CHD6-203ENST00000373233 PRKAR2BP31323 418 aa7.97□□□□□ -1.13
CHD6-203ENST00000373233 MNS1Q8NEH6 495 aa7.97□□□□□ -1.13
CHD6-203ENST00000373233 IPO4Q8TEX9 1081 aaKnown RBP7.97□□□□□ -1.13
CHD6-203ENST00000373233 TMEM2Q9UHN6 1383 aa7.97□□□□□ -1.13
CHD6-203ENST00000373233 NME9Q86XW9 330 aa7.96□□□□□ -1.13
CHD6-203ENST00000373233 RIMS1Q86UR5 1692 aaKnown RBP7.96□□□□□ -1.13
CHD6-203ENST00000373233 A0A1W2PP64 1363 aa7.96□□□□□ -1.13
CHD6-203ENST00000373233 GTF2A1P52655 376 aaPredicted RBP7.96□□□□□ -1.13
CHD6-203ENST00000373233 KIF20BQ96Q89 1820 aa7.96□□□□□ -1.13
CHD6-203ENST00000373233 RRS1Q15050 365 aaKnown RBP7.96□□□□□ -1.14
CHD6-203ENST00000373233 ZKSCAN2Q63HK3 967 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 CDR1P51861 262 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 BCL2L13Q9BXK5 485 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 NLRP1Q9C000 1473 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 KIAA0754O94854 1291 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 FOXD4L5Q5VV16 416 aaPredicted RBP7.96□□□□□ -1.14
CHD6-203ENST00000373233 FOXD4L4Q8WXT5 416 aaPredicted RBP7.96□□□□□ -1.14
CHD6-203ENST00000373233 ALKQ9UM73 1620 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 TIGD1Q96MW7 591 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 CLUAP1Q96AJ1 413 aa7.96□□□□□ -1.14
CHD6-203ENST00000373233 PUS7Q96PZ0 661 aaKnown RBP7.96□□□□□ -1.14
CHD6-203ENST00000373233 ISY1Q9ULR0 285 aaKnown RBP7.96□□□□□ -1.14
CHD6-203ENST00000373233 PDCL2Q8N4E4 241 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 AGLP35573 1532 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 NEXMIFQ5QGS0 1516 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 SBNO2Q9Y2G9 1366 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 IFT172Q9UG01 1749 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 CLGNO14967 610 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 C1orf141Q5JVX7 400 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 ZFYVE9O95405 1425 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 NEURL4Q96JN8 1562 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 ARHGEF28Q8N1W1 1705 aaKnown RBP7.95□□□□□ -1.14
CHD6-203ENST00000373233 GNAI1P63096 354 aa7.95□□□□□ -1.14
CHD6-203ENST00000373233 SIGLEC1Q9BZZ2 1709 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 NPC1L1Q9UHC9 1359 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 VGLL3A8MV65 326 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 SSR1P43307 286 aaKnown RBP7.94□□□□□ -1.14
CHD6-203ENST00000373233 DCTN1Q14203 1278 aa7.94□□□□□ -1.14
CHD6-203ENST00000373233 LETM1O95202 739 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms