RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ERLIN1O75477 346 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 ATP2B2Q01814 1243 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 TANGO6Q9C0B7 1094 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 HDGFL1Q5TGJ6 251 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 ME1P48163 572 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 KRT85P78386 507 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.22
VCL-202ENST00000372755 NOB1Q9ULX3 412 aaKnown RBP13.65□□□□□ -0.22
VCL-202ENST00000372755 CABP4P57796 275 aa13.64□□□□□ -0.23
VCL-202ENST00000372755 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
VCL-202ENST00000372755 IQCEQ6IPM2 695 aa13.64□□□□□ -0.23
VCL-202ENST00000372755 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
VCL-202ENST00000372755 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
VCL-202ENST00000372755 KIAA0754O94854 1291 aa13.63□□□□□ -0.23
VCL-202ENST00000372755 SPC24Q8NBT2 197 aa13.63□□□□□ -0.23
VCL-202ENST00000372755 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
VCL-202ENST00000372755 C1orf115Q9H7X2 142 aa13.63□□□□□ -0.23
VCL-202ENST00000372755 ANKRD62A6NC57 917 aa13.63□□□□□ -0.23
VCL-202ENST00000372755 DESP17661 470 aa13.63□□□□□ -0.23
VCL-202ENST00000372755 EIF3JO75822 258 aaKnown RBP13.63□□□□□ -0.23
VCL-202ENST00000372755 ZSCAN31Q96LW9 406 aaPredicted RBP13.62□□□□□ -0.23
VCL-202ENST00000372755 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
VCL-202ENST00000372755 STK3Q13188 491 aa13.62□□□□□ -0.23
VCL-202ENST00000372755 PROSER2Q86WR7 435 aaPredicted RBP13.62□□□□□ -0.23
VCL-202ENST00000372755 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
VCL-202ENST00000372755 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
VCL-202ENST00000372755 EZRP15311 586 aaKnown RBP13.62□□□□□ -0.23
VCL-202ENST00000372755 CCDC112Q8NEF3 446 aa13.62□□□□□ -0.23
VCL-202ENST00000372755 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
VCL-202ENST00000372755 ENOX2Q16206 610 aaKnown RBP13.61□□□□□ -0.23
VCL-202ENST00000372755 NUP133Q8WUM0 1156 aa13.61□□□□□ -0.23
VCL-202ENST00000372755 MPHOSPH8Q99549 860 aa13.61□□□□□ -0.23
VCL-202ENST00000372755 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
VCL-202ENST00000372755 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
VCL-202ENST00000372755 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
VCL-202ENST00000372755 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
VCL-202ENST00000372755 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
VCL-202ENST00000372755 WASF1Q92558 559 aa13.61□□□□□ -0.23
VCL-202ENST00000372755 CFAP45Q9UL16 551 aa13.6□□□□□ -0.23
VCL-202ENST00000372755 KRT32Q14532 448 aa13.6□□□□□ -0.23
VCL-202ENST00000372755 BLOC1S2Q6QNY1 142 aa13.6□□□□□ -0.23
VCL-202ENST00000372755 SIL1Q9H173 461 aa13.6□□□□□ -0.23
VCL-202ENST00000372755 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
VCL-202ENST00000372755 CFAP70Q5T0N1 1121 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 WDR63Q8IWG1 891 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
VCL-202ENST00000372755 CEP57L1Q8IYX8 460 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 UBAC1Q9BSL1 405 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
VCL-202ENST00000372755 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 PDRG1Q9NUG6 133 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 SPATA32Q96LK8 384 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
VCL-202ENST00000372755 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.23
VCL-202ENST00000372755 SMTNL1A8MU46 457 aa13.58□□□□□ -0.24
VCL-202ENST00000372755 SULT6B1Q6IMI4 303 aa13.58□□□□□ -0.24
VCL-202ENST00000372755 RBM5P52756 815 aaKnown RBP eCLIP13.58□□□□□ -0.24
VCL-202ENST00000372755 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
VCL-202ENST00000372755 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
VCL-202ENST00000372755 AACSQ86V21 672 aa13.58□□□□□ -0.24
VCL-202ENST00000372755 MPHOSPH10O00566 681 aaKnown RBP13.58□□□□□ -0.24
VCL-202ENST00000372755 TOM1L2Q6ZVM7 507 aa13.58□□□□□ -0.24
VCL-202ENST00000372755 TDO2P48775 406 aa13.58□□□□□ -0.24
VCL-202ENST00000372755 SEPT11Q9NVA2 429 aaKnown RBP13.58□□□□□ -0.24
VCL-202ENST00000372755 HFM1A2PYH4 1435 aa13.57□□□□□ -0.24
VCL-202ENST00000372755 JAKMIP3Q5VZ66 844 aa13.57□□□□□ -0.24
VCL-202ENST00000372755 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
VCL-202ENST00000372755 TSR2Q969E8 191 aaKnown RBP13.57□□□□□ -0.24
VCL-202ENST00000372755 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
VCL-202ENST00000372755 CEP131Q9UPN4 1083 aa13.57□□□□□ -0.24
VCL-202ENST00000372755 TAF4BQ92750 862 aa13.57□□□□□ -0.24
VCL-202ENST00000372755 FKBP4Q02790 459 aaKnown RBP eCLIP13.57□□□□□ -0.24
VCL-202ENST00000372755 NEBLO76041 1014 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 SSBP05455 408 aaKnown RBP eCLIP13.56□□□□□ -0.24
VCL-202ENST00000372755 TRIM21P19474 475 aaKnown RBP13.56□□□□□ -0.24
VCL-202ENST00000372755 ZNF76P36508 570 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 TAX1BP1Q86VP1 789 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 ATF7IPQ6VMQ6 1270 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 CDK19Q9BWU1 502 aa13.56□□□□□ -0.24
VCL-202ENST00000372755 MAP4K4O95819 1239 aaPredicted RBP13.56□□□□□ -0.24
VCL-202ENST00000372755 MVPQ14764 893 aaKnown RBP13.56□□□□□ -0.24
VCL-202ENST00000372755 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
VCL-202ENST00000372755 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
VCL-202ENST00000372755 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 THEMISQ8N1K5 641 aaPredicted RBP13.55□□□□□ -0.24
VCL-202ENST00000372755 DDX54Q8TDD1 881 aaKnown RBP13.55□□□□□ -0.24
VCL-202ENST00000372755 RAI14Q9P0K7 980 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 MYL6BP14649 208 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 HSP90AB3PQ58FF7 597 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
VCL-202ENST00000372755 DNAI2Q9GZS0 605 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 CENPHQ9H3R5 247 aa13.55□□□□□ -0.24
VCL-202ENST00000372755 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms