RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 TOM1L2Q6ZVM7 507 aa21.68■■□□□ 1.06
RPF1-202ENST00000370656 LRRC37A3O60309 1634 aa21.68■■□□□ 1.06
RPF1-202ENST00000370656 USP6P35125 1406 aa21.67■■□□□ 1.06
RPF1-202ENST00000370656 SLIT3O75094 1523 aa21.66■■□□□ 1.06
RPF1-202ENST00000370656 CABP1Q9NZU7 370 aa21.66■■□□□ 1.06
RPF1-202ENST00000370656 AKAP12Q02952 1782 aa21.66■■□□□ 1.06
RPF1-202ENST00000370656 WNK3Q9BYP7 1800 aa21.65■■□□□ 1.06
RPF1-202ENST00000370656 CDCA7Q9BWT1 371 aaPredicted RBP21.65■■□□□ 1.06
RPF1-202ENST00000370656 BCL11BQ9C0K0 894 aaPredicted RBP21.65■■□□□ 1.06
RPF1-202ENST00000370656 CASZ1Q86V15 1759 aa21.63■■□□□ 1.05
RPF1-202ENST00000370656 WDR17Q8IZU2 1322 aa21.62■■□□□ 1.05
RPF1-202ENST00000370656 COL18A1P39060 1754 aa21.62■■□□□ 1.05
RPF1-202ENST00000370656 PIK3C2AO00443 1686 aa21.62■■□□□ 1.05
RPF1-202ENST00000370656 EVC2Q86UK5 1308 aa21.6■■□□□ 1.05
RPF1-202ENST00000370656 MYOM1P52179 1685 aa21.6■■□□□ 1.05
RPF1-202ENST00000370656 KCNH5Q8NCM2 988 aa21.6■■□□□ 1.05
RPF1-202ENST00000370656 RGPD5Q99666 1765 aa21.59■■□□□ 1.05
RPF1-202ENST00000370656 BCL9O00512 1426 aa21.59■■□□□ 1.05
RPF1-202ENST00000370656 CPSF1Q10570 1443 aaKnown RBP21.59■■□□□ 1.05
RPF1-202ENST00000370656 CSB-PGBD3P0DP91 1061 aa21.58■■□□□ 1.05
RPF1-202ENST00000370656 ZNF692Q9BU19 519 aaPredicted RBP21.58■■□□□ 1.05
RPF1-202ENST00000370656 ANO8Q9HCE9 1232 aaPredicted RBP21.58■■□□□ 1.05
RPF1-202ENST00000370656 TRPM1Q7Z4N2 1603 aa21.58■■□□□ 1.04
RPF1-202ENST00000370656 MARCH10Q8NA82 808 aaPredicted RBP21.57■■□□□ 1.04
RPF1-202ENST00000370656 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
RPF1-202ENST00000370656 CARD10Q9BWT7 1032 aa21.56■■□□□ 1.04
RPF1-202ENST00000370656 CHD4Q14839 1912 aa21.55■■□□□ 1.04
RPF1-202ENST00000370656 ARHGEF25Q86VW2 580 aa21.55■■□□□ 1.04
RPF1-202ENST00000370656 STK32BQ9NY57 414 aa21.55■■□□□ 1.04
RPF1-202ENST00000370656 EXOC5O00471 708 aa21.54■■□□□ 1.04
RPF1-202ENST00000370656 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
RPF1-202ENST00000370656 PTF1AQ7RTS3 328 aa21.54■■□□□ 1.04
RPF1-202ENST00000370656 TTC21BQ7Z4L5 1316 aa21.54■■□□□ 1.04
RPF1-202ENST00000370656 TTC21AQ8NDW8 1320 aa21.54■■□□□ 1.04
RPF1-202ENST00000370656 ZBTB7AO95365 584 aa21.53■■□□□ 1.04
RPF1-202ENST00000370656 PROM2Q8N271 834 aa21.53■■□□□ 1.04
RPF1-202ENST00000370656 CCDC7Q96M83 1385 aa21.52■■□□□ 1.04
RPF1-202ENST00000370656 SOX12O15370 315 aa21.52■■□□□ 1.04
RPF1-202ENST00000370656 TXNRD1Q16881 649 aa21.52■■□□□ 1.04
RPF1-202ENST00000370656 ZNF784Q8NCA9 323 aaPredicted RBP21.52■■□□□ 1.04
RPF1-202ENST00000370656 CLSPNQ9HAW4 1339 aa21.51■■□□□ 1.03
RPF1-202ENST00000370656 ABCC6O95255 1503 aa21.5■■□□□ 1.03
RPF1-202ENST00000370656 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
RPF1-202ENST00000370656 PDGFDQ9GZP0 370 aaPredicted RBP21.5■■□□□ 1.03
RPF1-202ENST00000370656 SLC15A2Q16348 729 aa21.49■■□□□ 1.03
RPF1-202ENST00000370656 ATF5Q9Y2D1 282 aaPredicted RBP21.49■■□□□ 1.03
RPF1-202ENST00000370656 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
RPF1-202ENST00000370656 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
RPF1-202ENST00000370656 NFAT5O94916 1531 aa21.48■■□□□ 1.03
RPF1-202ENST00000370656 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
RPF1-202ENST00000370656 TNS2Q63HR2 1409 aa21.47■■□□□ 1.03
RPF1-202ENST00000370656 PTGER2P43116 358 aa21.47■■□□□ 1.03
RPF1-202ENST00000370656 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
RPF1-202ENST00000370656 NHSQ6T4R5 1651 aa21.47■■□□□ 1.03
RPF1-202ENST00000370656 MTFR1LQ9H019 292 aa21.46■■□□□ 1.03
RPF1-202ENST00000370656 ROCK2O75116 1388 aaKnown RBP21.46■■□□□ 1.03
RPF1-202ENST00000370656 UTRNP46939 3433 aa21.45■■□□□ 1.02
RPF1-202ENST00000370656 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
RPF1-202ENST00000370656 SYT17Q9BSW7 474 aa21.43■■□□□ 1.02
RPF1-202ENST00000370656 FHDC1Q9C0D6 1143 aaPredicted RBP21.43■■□□□ 1.02
RPF1-202ENST00000370656 LTN1O94822 1766 aa21.42■■□□□ 1.02
RPF1-202ENST00000370656 NLRP2Q9NX02 1062 aa21.41■■□□□ 1.02
RPF1-202ENST00000370656 ERBB3P21860 1342 aa21.4■■□□□ 1.02
RPF1-202ENST00000370656 CACNB1Q02641 598 aaPredicted RBP21.4■■□□□ 1.02
RPF1-202ENST00000370656 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
RPF1-202ENST00000370656 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
RPF1-202ENST00000370656 USP31Q70CQ4 1352 aa21.39■■□□□ 1.02
RPF1-202ENST00000370656 BTAF1O14981 1849 aa21.39■■□□□ 1.02
RPF1-202ENST00000370656 IL2RBP14784 551 aa21.39■■□□□ 1.01
RPF1-202ENST00000370656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
RPF1-202ENST00000370656 C1QTNF8P60827 252 aa21.38■■□□□ 1.01
RPF1-202ENST00000370656 ARXQ96QS3 562 aa21.38■■□□□ 1.01
RPF1-202ENST00000370656 SGIP1Q9BQI5 828 aa21.37■■□□□ 1.01
RPF1-202ENST00000370656 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
RPF1-202ENST00000370656 SBNO2Q9Y2G9 1366 aa21.35■■□□□ 1.01
RPF1-202ENST00000370656 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
RPF1-202ENST00000370656 HDGFL2Q7Z4V5 671 aaPredicted RBP21.34■■□□□ 1.01
RPF1-202ENST00000370656 ANKRD24Q8TF21 1146 aa21.34■■□□□ 1.01
RPF1-202ENST00000370656 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
RPF1-202ENST00000370656 MAP3K5Q99683 1374 aa21.34■■□□□ 1.01
RPF1-202ENST00000370656 NME9Q86XW9 330 aa21.33■■□□□ 1.01
RPF1-202ENST00000370656 TMC1Q8TDI8 760 aa21.33■■□□□ 1.01
RPF1-202ENST00000370656 QSER1Q2KHR3 1735 aa21.31■■□□□ 1
RPF1-202ENST00000370656 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
RPF1-202ENST00000370656 SLC27A3Q5K4L6 730 aa21.3■■□□□ 1
RPF1-202ENST00000370656 SLC16A10Q8TF71 515 aa21.3■■□□□ 1
RPF1-202ENST00000370656 TERF2IPQ9NYB0 399 aa21.3■■□□□ 1
RPF1-202ENST00000370656 EDC4Q6P2E9 1401 aaKnown RBP21.29■■□□□ 1
RPF1-202ENST00000370656 CD163L1Q9NR16 1453 aa21.29■■□□□ 1
RPF1-202ENST00000370656 ZNF827Q17R98 1081 aa21.29■■□□□ 1
RPF1-202ENST00000370656 POLD1P28340 1107 aa21.28■■□□□ 1
RPF1-202ENST00000370656 GPR162Q16538 588 aa21.28■■□□□ 1
RPF1-202ENST00000370656 KLHL34Q8N239 644 aa21.27■■□□□ 1
RPF1-202ENST00000370656 CARD11Q9BXL7 1154 aa21.27■■□□□ 1
RPF1-202ENST00000370656 LRRC4BQ9NT99 713 aa21.27■■□□□ 1
RPF1-202ENST00000370656 GIGYF1O75420 1035 aaPredicted RBP21.26■□□□□ 0.99
RPF1-202ENST00000370656 DDX54Q8TDD1 881 aaKnown RBP21.26■□□□□ 0.99
RPF1-202ENST00000370656 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
RPF1-202ENST00000370656 IFFO2Q5TF58 517 aa21.25■□□□□ 0.99
RPF1-202ENST00000370656 IP6K1Q92551 441 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms