RNA–Protein interactions for RNA: ENST00000370115.1

VCAM1-203, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene VCAM1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-203ENST00000370115 SMC5Q8IY18 1101 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 TBC1D2Q9BYX2 928 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 ANTXR1Q9H6X2 564 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 RTN4Q9NQC3 1192 aaKnown RBP6.26□□□□□ -1.41
VCAM1-203ENST00000370115 NRXN3Q9Y4C0 1643 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 ZNF335Q9H4Z2 1342 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-203ENST00000370115 TOM1O60784 492 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 HMOX1P09601 288 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 CEBPAP49715 358 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-203ENST00000370115 ALDH1L2Q3SY69 923 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 PHACTR3Q96KR7 559 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 RGS17Q9UGC6 210 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-203ENST00000370115 BRPF3Q9ULD4 1205 aa6.26□□□□□ -1.41
VCAM1-203ENST00000370115 IPO8O15397 1037 aaKnown RBP6.25□□□□□ -1.41
VCAM1-203ENST00000370115 EMILIN1Q9Y6C2 1016 aa6.25□□□□□ -1.41
VCAM1-203ENST00000370115 REREQ9P2R6 1566 aa6.25□□□□□ -1.41
VCAM1-203ENST00000370115 RIMS2Q9UQ26 1411 aa6.25□□□□□ -1.41
VCAM1-203ENST00000370115 MFAP1P55081 439 aaKnown RBP6.25□□□□□ -1.41
VCAM1-203ENST00000370115 PIP4K2BP78356 416 aa6.25□□□□□ -1.41
VCAM1-203ENST00000370115 THUMPD2Q9BTF0 503 aaKnown RBP6.25□□□□□ -1.41
VCAM1-203ENST00000370115 C22orf23Q9BZE7 217 aa6.25□□□□□ -1.41
VCAM1-203ENST00000370115 CPSF1Q10570 1443 aaKnown RBP6.25□□□□□ -1.41
VCAM1-203ENST00000370115 PPIP5K1Q6PFW1 1433 aa6.25□□□□□ -1.41
VCAM1-203ENST00000370115 AGLP35573 1532 aa6.25□□□□□ -1.41
VCAM1-203ENST00000370115 MON2Q7Z3U7 1717 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 NFE2L2Q16236 605 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 NME9Q86XW9 330 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 ZRANB1Q9UGI0 708 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 AKAP12Q02952 1782 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 VAMP4O75379 141 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 IL13P35225 146 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 BRPF1P55201 1214 aaPredicted RBP6.24□□□□□ -1.41
VCAM1-203ENST00000370115 TSPYL6Q8N831 410 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 SPRYD3Q8NCJ5 442 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 ITSN1Q15811 1721 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 EDC4Q6P2E9 1401 aaKnown RBP6.24□□□□□ -1.41
VCAM1-203ENST00000370115 NCKAP5LQ9HCH0 1330 aa6.24□□□□□ -1.41
VCAM1-203ENST00000370115 METP08581 1390 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 WASLO00401 505 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-203ENST00000370115 ELL2O00472 640 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-203ENST00000370115 ZBTB7BO15156 539 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-203ENST00000370115 NUCB1Q02818 461 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 MRPL50Q8N5N7 158 aaKnown RBP6.23□□□□□ -1.41
VCAM1-203ENST00000370115 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 LNPKQ9C0E8 428 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 CPS1P31327 1500 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 C3P01024 1663 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 CDK12Q9NYV4 1490 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-203ENST00000370115 KNDC1Q76NI1 1749 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 MBIPQ9NS73 344 aa6.23□□□□□ -1.41
VCAM1-203ENST00000370115 ZNF853P0CG23 659 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 GNAI1P63096 354 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 RRS1Q15050 365 aaKnown RBP6.22□□□□□ -1.41
VCAM1-203ENST00000370115 TXNDC2Q86VQ3 553 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 CHD1LQ86WJ1 897 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 C1orf115Q9H7X2 142 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 PTCH1Q13635 1447 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 AATKQ6ZMQ8 1374 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 FAM83GA6ND36 823 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 NUDT16Q96DE0 195 aaKnown RBP6.22□□□□□ -1.41
VCAM1-203ENST00000370115 IFT57Q9NWB7 429 aa6.22□□□□□ -1.41
VCAM1-203ENST00000370115 PIK3R4Q99570 1358 aa6.21□□□□□ -1.41
VCAM1-203ENST00000370115 CALD1Q05682 793 aaKnown RBP6.21□□□□□ -1.41
VCAM1-203ENST00000370115 TWISTNBQ3B726 338 aaPredicted RBP6.21□□□□□ -1.41
VCAM1-203ENST00000370115 C8orf58Q8NAV2 365 aa6.21□□□□□ -1.41
VCAM1-203ENST00000370115 ARHGAP45Q92619 1136 aa6.21□□□□□ -1.41
VCAM1-203ENST00000370115 COG3Q96JB2 828 aa6.21□□□□□ -1.41
VCAM1-203ENST00000370115 DCTN1Q14203 1278 aa6.21□□□□□ -1.42
VCAM1-203ENST00000370115 ANKRD45Q5TZF3 282 aa6.21□□□□□ -1.42
VCAM1-203ENST00000370115 SIRT2Q8IXJ6 389 aa6.21□□□□□ -1.42
VCAM1-203ENST00000370115 CFAP44Q96MT7 982 aa6.21□□□□□ -1.42
VCAM1-203ENST00000370115 CCDC61Q9Y6R9 512 aa6.21□□□□□ -1.42
VCAM1-203ENST00000370115 ABCC4O15439 1325 aa6.21□□□□□ -1.42
VCAM1-203ENST00000370115 RBM25P49756 843 aaKnown RBP6.2□□□□□ -1.42
VCAM1-203ENST00000370115 GCC1Q96CN9 775 aa6.2□□□□□ -1.42
VCAM1-203ENST00000370115 BMP2KLQ5H9B9 411 aa6.2□□□□□ -1.42
VCAM1-203ENST00000370115 POTEAQ6S8J7 498 aa6.2□□□□□ -1.42
VCAM1-203ENST00000370115 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.2□□□□□ -1.42
VCAM1-203ENST00000370115 PRR36Q9H6K5 1346 aa6.2□□□□□ -1.42
VCAM1-203ENST00000370115 TECPR2O15040 1411 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 NRKQ7Z2Y5 1582 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 MCM4P33991 863 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 LMOD3Q0VAK6 560 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 HSCBQ8IWL3 235 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 CHMP4BQ9H444 224 aaKnown RBP6.19□□□□□ -1.42
VCAM1-203ENST00000370115 CHMP5Q9NZZ3 219 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 UBR1Q8IWV7 1749 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.19□□□□□ -1.42
VCAM1-203ENST00000370115 ZNF692Q9BU19 519 aaPredicted RBP6.19□□□□□ -1.42
VCAM1-203ENST00000370115 NCOA3Q9Y6Q9 1424 aa6.19□□□□□ -1.42
VCAM1-203ENST00000370115 AEBP1Q8IUX7 1158 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 SIRT1Q96EB6 747 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 KIF2CQ99661 725 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 TOPAZ1Q8N9V7 1692 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 PEAK1Q9H792 1746 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 DDIT3P35638 169 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 EIF4A2Q14240 407 aaKnown RBP6.18□□□□□ -1.42
VCAM1-203ENST00000370115 KRT24Q2M2I5 525 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 SULT6B1Q6IMI4 303 aa6.18□□□□□ -1.42
VCAM1-203ENST00000370115 UPF1Q92900 1129 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms