RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IL13P35225 146 aa13.77□□□□□ -0.2
TPM3-212ENST00000368533 PLEKHF1Q96S99 279 aa13.77□□□□□ -0.2
TPM3-212ENST00000368533 ADGRB2O60241 1585 aa13.77□□□□□ -0.2
TPM3-212ENST00000368533 TMEM94Q12767 1356 aa13.77□□□□□ -0.2
TPM3-212ENST00000368533 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
TPM3-212ENST00000368533 MON2Q7Z3U7 1717 aa13.77□□□□□ -0.21
TPM3-212ENST00000368533 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.21
TPM3-212ENST00000368533 COL3A1P02461 1466 aaPredicted RBP13.77□□□□□ -0.21
TPM3-212ENST00000368533 ADRA2BP18089 450 aa13.77□□□□□ -0.21
TPM3-212ENST00000368533 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
TPM3-212ENST00000368533 FRAT1Q92837 279 aaPredicted RBP13.76□□□□□ -0.21
TPM3-212ENST00000368533 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
TPM3-212ENST00000368533 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
TPM3-212ENST00000368533 ATF3P18847 181 aa13.75□□□□□ -0.21
TPM3-212ENST00000368533 ADGRL3Q9HAR2 1447 aa13.75□□□□□ -0.21
TPM3-212ENST00000368533 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
TPM3-212ENST00000368533 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
TPM3-212ENST00000368533 TOPAZ1Q8N9V7 1692 aa13.74□□□□□ -0.21
TPM3-212ENST00000368533 E9PSI1 815 aa13.74□□□□□ -0.21
TPM3-212ENST00000368533 TCERG1O14776 1098 aaKnown RBP13.74□□□□□ -0.21
TPM3-212ENST00000368533 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
TPM3-212ENST00000368533 CRBNQ96SW2 442 aa13.74□□□□□ -0.21
TPM3-212ENST00000368533 PNPLA6Q8IY17 1366 aa13.73□□□□□ -0.21
TPM3-212ENST00000368533 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
TPM3-212ENST00000368533 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
TPM3-212ENST00000368533 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
TPM3-212ENST00000368533 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
TPM3-212ENST00000368533 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
TPM3-212ENST00000368533 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
TPM3-212ENST00000368533 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
TPM3-212ENST00000368533 ZC3H6P61129 1189 aaKnown RBP13.72□□□□□ -0.21
TPM3-212ENST00000368533 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
TPM3-212ENST00000368533 FCHSD2O94868 740 aa13.71□□□□□ -0.21
TPM3-212ENST00000368533 KCNA4P22459 653 aa13.71□□□□□ -0.21
TPM3-212ENST00000368533 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
TPM3-212ENST00000368533 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.21
TPM3-212ENST00000368533 SSH2Q76I76 1423 aa13.71□□□□□ -0.21
TPM3-212ENST00000368533 TTC21AQ8NDW8 1320 aa13.71□□□□□ -0.21
TPM3-212ENST00000368533 INSRP06213 1382 aa13.71□□□□□ -0.22
TPM3-212ENST00000368533 IQSEC2Q5JU85 1478 aa13.71□□□□□ -0.22
TPM3-212ENST00000368533 EXOSC9Q06265 439 aaKnown RBP13.7□□□□□ -0.22
TPM3-212ENST00000368533 NRKQ7Z2Y5 1582 aa13.7□□□□□ -0.22
TPM3-212ENST00000368533 MCM10Q7L590 875 aa13.7□□□□□ -0.22
TPM3-212ENST00000368533 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
TPM3-212ENST00000368533 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
TPM3-212ENST00000368533 PIK3C2AO00443 1686 aa13.69□□□□□ -0.22
TPM3-212ENST00000368533 STRCP1A6NGW2 1772 aa13.69□□□□□ -0.22
TPM3-212ENST00000368533 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
TPM3-212ENST00000368533 ANKARQ7Z5J8 1434 aa13.69□□□□□ -0.22
TPM3-212ENST00000368533 EYA1Q99502 592 aa13.68□□□□□ -0.22
TPM3-212ENST00000368533 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
TPM3-212ENST00000368533 TRMT2AQ8IZ69 625 aaKnown RBP13.68□□□□□ -0.22
TPM3-212ENST00000368533 PANK1Q8TE04 598 aa13.68□□□□□ -0.22
TPM3-212ENST00000368533 PEAK1Q9H792 1746 aa13.68□□□□□ -0.22
TPM3-212ENST00000368533 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
TPM3-212ENST00000368533 PDE4AP27815 886 aa13.68□□□□□ -0.22
TPM3-212ENST00000368533 HOXC9P31274 260 aa13.68□□□□□ -0.22
TPM3-212ENST00000368533 NFE2L2Q16236 605 aa13.67□□□□□ -0.22
TPM3-212ENST00000368533 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
TPM3-212ENST00000368533 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
TPM3-212ENST00000368533 CHRNA2Q15822 529 aa13.66□□□□□ -0.22
TPM3-212ENST00000368533 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
TPM3-212ENST00000368533 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
TPM3-212ENST00000368533 COG6Q9Y2V7 657 aa13.65□□□□□ -0.22
TPM3-212ENST00000368533 FLT4P35916 1363 aa13.65□□□□□ -0.22
TPM3-212ENST00000368533 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
TPM3-212ENST00000368533 GCP02774 474 aa13.65□□□□□ -0.22
TPM3-212ENST00000368533 MYH16Q9H6N6 1097 aa13.65□□□□□ -0.22
TPM3-212ENST00000368533 PNNQ9H307 717 aaKnown RBP13.64□□□□□ -0.23
TPM3-212ENST00000368533 TSPYL6Q8N831 410 aa13.64□□□□□ -0.23
TPM3-212ENST00000368533 GSE1Q14687 1217 aa13.64□□□□□ -0.23
TPM3-212ENST00000368533 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
TPM3-212ENST00000368533 RARSP54136 660 aaKnown RBP13.63□□□□□ -0.23
TPM3-212ENST00000368533 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
TPM3-212ENST00000368533 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
TPM3-212ENST00000368533 SBNO1A3KN83 1393 aa13.63□□□□□ -0.23
TPM3-212ENST00000368533 MSH6P52701 1360 aa13.63□□□□□ -0.23
TPM3-212ENST00000368533 SMC4Q9NTJ3 1288 aa13.63□□□□□ -0.23
TPM3-212ENST00000368533 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
TPM3-212ENST00000368533 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
TPM3-212ENST00000368533 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
TPM3-212ENST00000368533 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
TPM3-212ENST00000368533 RLBP1P12271 317 aa13.61□□□□□ -0.23
TPM3-212ENST00000368533 STRCQ7RTU9 1775 aa13.61□□□□□ -0.23
TPM3-212ENST00000368533 VSIG10Q8N0Z9 540 aa13.61□□□□□ -0.23
TPM3-212ENST00000368533 MBIPQ9NS73 344 aa13.61□□□□□ -0.23
TPM3-212ENST00000368533 MST1RQ04912 1400 aa13.61□□□□□ -0.23
TPM3-212ENST00000368533 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
TPM3-212ENST00000368533 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
TPM3-212ENST00000368533 RGS3P49796 1198 aa13.59□□□□□ -0.23
TPM3-212ENST00000368533 BRINP3Q76B58 766 aa13.59□□□□□ -0.23
TPM3-212ENST00000368533 NGEFQ8N5V2 710 aa13.59□□□□□ -0.23
TPM3-212ENST00000368533 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
TPM3-212ENST00000368533 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
TPM3-212ENST00000368533 HAP1P54257 671 aaPredicted RBP13.59□□□□□ -0.23
TPM3-212ENST00000368533 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
TPM3-212ENST00000368533 MS4A1P11836 297 aa13.58□□□□□ -0.24
TPM3-212ENST00000368533 C8orf58Q8NAV2 365 aa13.58□□□□□ -0.24
TPM3-212ENST00000368533 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
TPM3-212ENST00000368533 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms