RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 PLIN1O60240 522 aa13.89□□□□□ -0.19
TMCO1-201ENST00000367881 BRINP3Q76B58 766 aa13.89□□□□□ -0.19
TMCO1-201ENST00000367881 KRT28Q7Z3Y7 464 aa13.88□□□□□ -0.19
TMCO1-201ENST00000367881 ABTB2Q8N961 1025 aa13.88□□□□□ -0.19
TMCO1-201ENST00000367881 PXDNQ92626 1479 aa13.88□□□□□ -0.19
TMCO1-201ENST00000367881 AATKQ6ZMQ8 1374 aa13.88□□□□□ -0.19
TMCO1-201ENST00000367881 FBLN1P23142 703 aa13.88□□□□□ -0.19
TMCO1-201ENST00000367881 ROBO1Q9Y6N7 1651 aa13.88□□□□□ -0.19
TMCO1-201ENST00000367881 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
TMCO1-201ENST00000367881 NLRP6P59044 892 aa13.87□□□□□ -0.19
TMCO1-201ENST00000367881 DDX17Q92841 729 aaKnown RBP13.87□□□□□ -0.19
TMCO1-201ENST00000367881 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
TMCO1-201ENST00000367881 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
TMCO1-201ENST00000367881 PEAK1Q9H792 1746 aa13.87□□□□□ -0.19
TMCO1-201ENST00000367881 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
TMCO1-201ENST00000367881 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
TMCO1-201ENST00000367881 SLFN5Q08AF3 891 aa13.85□□□□□ -0.19
TMCO1-201ENST00000367881 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
TMCO1-201ENST00000367881 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
TMCO1-201ENST00000367881 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
TMCO1-201ENST00000367881 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
TMCO1-201ENST00000367881 SBNO1A3KN83 1393 aa13.84□□□□□ -0.19
TMCO1-201ENST00000367881 PHRF1Q9P1Y6 1649 aaKnown RBP13.84□□□□□ -0.19
TMCO1-201ENST00000367881 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
TMCO1-201ENST00000367881 DAXXQ9UER7 740 aaPredicted RBP13.84□□□□□ -0.19
TMCO1-201ENST00000367881 LAS1LQ9Y4W2 734 aaKnown RBP13.84□□□□□ -0.19
TMCO1-201ENST00000367881 EMILIN1Q9Y6C2 1016 aa13.84□□□□□ -0.19
TMCO1-201ENST00000367881 SOX12O15370 315 aa13.83□□□□□ -0.2
TMCO1-201ENST00000367881 SLIT3O75094 1523 aa13.83□□□□□ -0.2
TMCO1-201ENST00000367881 NFAT5O94916 1531 aa13.83□□□□□ -0.2
TMCO1-201ENST00000367881 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.2
TMCO1-201ENST00000367881 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
TMCO1-201ENST00000367881 C20orf194Q5TEA3 1177 aa13.83□□□□□ -0.2
TMCO1-201ENST00000367881 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
TMCO1-201ENST00000367881 E9PSI1 815 aa13.82□□□□□ -0.2
TMCO1-201ENST00000367881 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
TMCO1-201ENST00000367881 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
TMCO1-201ENST00000367881 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
TMCO1-201ENST00000367881 SOS2Q07890 1332 aaPredicted RBP13.81□□□□□ -0.2
TMCO1-201ENST00000367881 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
TMCO1-201ENST00000367881 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
TMCO1-201ENST00000367881 RGPD5Q99666 1765 aa13.8□□□□□ -0.2
TMCO1-201ENST00000367881 IQSEC2Q5JU85 1478 aa13.8□□□□□ -0.2
TMCO1-201ENST00000367881 USP19O94966 1318 aa13.8□□□□□ -0.2
TMCO1-201ENST00000367881 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
TMCO1-201ENST00000367881 AAMPQ13685 434 aa13.79□□□□□ -0.2
TMCO1-201ENST00000367881 C8orf34Q49A92 452 aa13.79□□□□□ -0.2
TMCO1-201ENST00000367881 PHLPP1O60346 1717 aa13.79□□□□□ -0.2
TMCO1-201ENST00000367881 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
TMCO1-201ENST00000367881 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
TMCO1-201ENST00000367881 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
TMCO1-201ENST00000367881 PDE3AQ14432 1141 aa13.78□□□□□ -0.2
TMCO1-201ENST00000367881 RGPD1P0DJD0 1748 aa13.77□□□□□ -0.2
TMCO1-201ENST00000367881 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
TMCO1-201ENST00000367881 FLT4P35916 1363 aa13.77□□□□□ -0.21
TMCO1-201ENST00000367881 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
TMCO1-201ENST00000367881 TOM1O60784 492 aa13.76□□□□□ -0.21
TMCO1-201ENST00000367881 GCP02774 474 aa13.76□□□□□ -0.21
TMCO1-201ENST00000367881 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
TMCO1-201ENST00000367881 KIF24Q5T7B8 1368 aa13.76□□□□□ -0.21
TMCO1-201ENST00000367881 GSE1Q14687 1217 aa13.76□□□□□ -0.21
TMCO1-201ENST00000367881 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
TMCO1-201ENST00000367881 AMPHP49418 695 aa13.75□□□□□ -0.21
TMCO1-201ENST00000367881 NFKBIBQ15653 356 aa13.75□□□□□ -0.21
TMCO1-201ENST00000367881 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
TMCO1-201ENST00000367881 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMCO1-201ENST00000367881 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
TMCO1-201ENST00000367881 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
TMCO1-201ENST00000367881 COL16A1Q07092 1604 aaPredicted RBP13.74□□□□□ -0.21
TMCO1-201ENST00000367881 COL18A1P39060 1754 aa13.74□□□□□ -0.21
TMCO1-201ENST00000367881 IL13P35225 146 aa13.74□□□□□ -0.21
TMCO1-201ENST00000367881 CCDC146Q8IYE0 955 aa13.74□□□□□ -0.21
TMCO1-201ENST00000367881 APAF1O14727 1248 aa13.74□□□□□ -0.21
TMCO1-201ENST00000367881 COL22A1Q8NFW1 1626 aaPredicted RBP13.73□□□□□ -0.21
TMCO1-201ENST00000367881 UBAP1LF5GYI3 381 aa13.73□□□□□ -0.21
TMCO1-201ENST00000367881 HOXC9P31274 260 aa13.73□□□□□ -0.21
TMCO1-201ENST00000367881 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
TMCO1-201ENST00000367881 CERKQ8TCT0 537 aa13.73□□□□□ -0.21
TMCO1-201ENST00000367881 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
TMCO1-201ENST00000367881 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
TMCO1-201ENST00000367881 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
TMCO1-201ENST00000367881 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
TMCO1-201ENST00000367881 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
TMCO1-201ENST00000367881 ARHGEF25Q86VW2 580 aa13.72□□□□□ -0.21
TMCO1-201ENST00000367881 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
TMCO1-201ENST00000367881 IP6K1Q92551 441 aa13.71□□□□□ -0.22
TMCO1-201ENST00000367881 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
TMCO1-201ENST00000367881 RUNDC1Q96C34 613 aa13.7□□□□□ -0.22
TMCO1-201ENST00000367881 LRRC59Q96AG4 307 aaKnown RBP13.7□□□□□ -0.22
TMCO1-201ENST00000367881 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
TMCO1-201ENST00000367881 ABCC6O95255 1503 aa13.69□□□□□ -0.22
TMCO1-201ENST00000367881 RGS3P49796 1198 aa13.69□□□□□ -0.22
TMCO1-201ENST00000367881 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
TMCO1-201ENST00000367881 HMOX1P09601 288 aa13.68□□□□□ -0.22
TMCO1-201ENST00000367881 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
TMCO1-201ENST00000367881 FCHSD2O94868 740 aa13.68□□□□□ -0.22
TMCO1-201ENST00000367881 PLEKHF1Q96S99 279 aa13.68□□□□□ -0.22
TMCO1-201ENST00000367881 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
TMCO1-201ENST00000367881 CPDO75976 1380 aa13.68□□□□□ -0.22
TMCO1-201ENST00000367881 BCAR3O75815 825 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms