RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
ATF3-206ENST00000366987 PIK3C2BO00750 1634 aa12.44□□□□□ -0.42
ATF3-206ENST00000366987 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
ATF3-206ENST00000366987 ZKSCAN5Q9Y2L8 839 aa12.43□□□□□ -0.42
ATF3-206ENST00000366987 KIF1BO60333 1816 aa12.43□□□□□ -0.42
ATF3-206ENST00000366987 SETD1BQ9UPS6 1966 aaKnown RBP12.43□□□□□ -0.42
ATF3-206ENST00000366987 NBPF6Q5VWK0 638 aa12.43□□□□□ -0.42
ATF3-206ENST00000366987 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
ATF3-206ENST00000366987 NBPF4Q96M43 638 aa12.43□□□□□ -0.42
ATF3-206ENST00000366987 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
ATF3-206ENST00000366987 PLA2R1Q13018 1463 aa12.42□□□□□ -0.42
ATF3-206ENST00000366987 CLTCL1P53675 1640 aa12.42□□□□□ -0.42
ATF3-206ENST00000366987 SIRT1Q96EB6 747 aa12.42□□□□□ -0.42
ATF3-206ENST00000366987 FEZ2Q9UHY8 353 aaPredicted RBP12.42□□□□□ -0.42
ATF3-206ENST00000366987 TNRQ92752 1358 aa12.41□□□□□ -0.42
ATF3-206ENST00000366987 CHMP5Q9NZZ3 219 aa12.41□□□□□ -0.42
ATF3-206ENST00000366987 KDM5AP29375 1690 aaKnown RBP12.41□□□□□ -0.42
ATF3-206ENST00000366987 NOP2P46087 812 aaKnown RBP12.41□□□□□ -0.42
ATF3-206ENST00000366987 SEMA3FQ13275 785 aa12.41□□□□□ -0.42
ATF3-206ENST00000366987 ICE2Q659A1 982 aa12.41□□□□□ -0.42
ATF3-206ENST00000366987 CENPQQ7L2Z9 268 aaPredicted RBP12.41□□□□□ -0.42
ATF3-206ENST00000366987 MRS2Q9HD23 443 aa12.41□□□□□ -0.42
ATF3-206ENST00000366987 NEURL4Q96JN8 1562 aa12.4□□□□□ -0.42
ATF3-206ENST00000366987 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
ATF3-206ENST00000366987 MYO3AQ8NEV4 1616 aa12.4□□□□□ -0.42
ATF3-206ENST00000366987 GUCY2CP25092 1073 aa12.4□□□□□ -0.42
ATF3-206ENST00000366987 NASPP49321 788 aaPredicted RBP12.4□□□□□ -0.42
ATF3-206ENST00000366987 FBXO31Q5XUX0 539 aaPredicted RBP12.4□□□□□ -0.42
ATF3-206ENST00000366987 KDM4FA0A1W2PPD8 638 aa12.39□□□□□ -0.43
ATF3-206ENST00000366987 IRF6O14896 467 aa12.39□□□□□ -0.43
ATF3-206ENST00000366987 SLFN14P0C7P3 912 aa12.39□□□□□ -0.43
ATF3-206ENST00000366987 CT47A1Q5JQC4 288 aaPredicted RBP12.39□□□□□ -0.43
ATF3-206ENST00000366987 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
ATF3-206ENST00000366987 EXOC6Q8TAG9 804 aa12.39□□□□□ -0.43
ATF3-206ENST00000366987 PRKRIP1Q9H875 184 aaPredicted RBP12.39□□□□□ -0.43
ATF3-206ENST00000366987 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
ATF3-206ENST00000366987 CEBPAP49715 358 aaPredicted RBP12.39□□□□□ -0.43
ATF3-206ENST00000366987 PRDM16Q9HAZ2 1276 aa12.39□□□□□ -0.43
ATF3-206ENST00000366987 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
ATF3-206ENST00000366987 UGGT1Q9NYU2 1555 aa12.38□□□□□ -0.43
ATF3-206ENST00000366987 KIF3CO14782 793 aa12.38□□□□□ -0.43
ATF3-206ENST00000366987 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
ATF3-206ENST00000366987 PDLIM2Q96JY6 352 aa12.38□□□□□ -0.43
ATF3-206ENST00000366987 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
ATF3-206ENST00000366987 ADGRB3O60242 1522 aa12.37□□□□□ -0.43
ATF3-206ENST00000366987 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
ATF3-206ENST00000366987 SYCP1Q15431 976 aa12.37□□□□□ -0.43
ATF3-206ENST00000366987 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
ATF3-206ENST00000366987 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
ATF3-206ENST00000366987 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
ATF3-206ENST00000366987 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATF3-206ENST00000366987 CHMP4CQ96CF2 233 aa12.36□□□□□ -0.43
ATF3-206ENST00000366987 KDM2BQ8NHM5 1336 aa12.36□□□□□ -0.43
ATF3-206ENST00000366987 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
ATF3-206ENST00000366987 TMEM131LA2VDJ0 1609 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 UBR1Q8IWV7 1749 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 A2ML1A8K2U0 1454 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 DHX16O60231 1041 aaKnown RBP12.35□□□□□ -0.43
ATF3-206ENST00000366987 TRDNQ13061 729 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 TERF2Q15554 542 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 FAM210AQ96ND0 272 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 MYO5BQ9ULV0 1848 aa12.35□□□□□ -0.43
ATF3-206ENST00000366987 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
ATF3-206ENST00000366987 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
ATF3-206ENST00000366987 IDI1Q13907 227 aa12.34□□□□□ -0.43
ATF3-206ENST00000366987 RNF217Q8TC41 542 aa12.34□□□□□ -0.43
ATF3-206ENST00000366987 UHRF1BP1Q6BDS2 1440 aa12.34□□□□□ -0.43
ATF3-206ENST00000366987 GOLGA6L6A8MZA4 724 aa12.33□□□□□ -0.44
ATF3-206ENST00000366987 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
ATF3-206ENST00000366987 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
ATF3-206ENST00000366987 TDO2P48775 406 aa12.33□□□□□ -0.44
ATF3-206ENST00000366987 TONSLQ96HA7 1378 aa12.32□□□□□ -0.44
ATF3-206ENST00000366987 ITFG2Q969R8 447 aa12.32□□□□□ -0.44
ATF3-206ENST00000366987 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
ATF3-206ENST00000366987 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
ATF3-206ENST00000366987 IFT172Q9UG01 1749 aa12.32□□□□□ -0.44
ATF3-206ENST00000366987 PPP1R12AO14974 1030 aaPredicted RBP12.31□□□□□ -0.44
ATF3-206ENST00000366987 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
ATF3-206ENST00000366987 SLKQ9H2G2 1235 aaPredicted RBP12.31□□□□□ -0.44
ATF3-206ENST00000366987 PPLO60437 1756 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 CCDC91Q7Z6B0 441 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 GOLGA6L1Q8N7Z2 621 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 GBP4Q96PP9 640 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 PANK3Q9H999 370 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
ATF3-206ENST00000366987 RSPH14Q9UHP6 348 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 RCAN3Q9UKA8 241 aa12.31□□□□□ -0.44
ATF3-206ENST00000366987 MORC2Q9Y6X9 1032 aaPredicted RBP12.31□□□□□ -0.44
ATF3-206ENST00000366987 GOLGA6L22H0YM25 854 aa12.3□□□□□ -0.44
ATF3-206ENST00000366987 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
ATF3-206ENST00000366987 LIG1P18858 919 aa12.3□□□□□ -0.44
ATF3-206ENST00000366987 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
ATF3-206ENST00000366987 DIAPH3Q9NSV4 1193 aa12.3□□□□□ -0.44
ATF3-206ENST00000366987 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
ATF3-206ENST00000366987 MRVI1Q9Y6F6 885 aa12.3□□□□□ -0.44
ATF3-206ENST00000366987 RPGRIP1LQ68CZ1 1315 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms