RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PANK1Q8TE04 598 aa23.98■■□□□ 1.43
CMTM3-201ENST00000361909 GGNBP2Q9H3C7 697 aa23.98■■□□□ 1.43
CMTM3-201ENST00000361909 NCOA3Q9Y6Q9 1424 aa23.97■■□□□ 1.43
CMTM3-201ENST00000361909 MYH16Q9H6N6 1097 aa23.96■■□□□ 1.43
CMTM3-201ENST00000361909 PDZRN3Q9UPQ7 1066 aa23.96■■□□□ 1.43
CMTM3-201ENST00000361909 SHPRHQ149N8 1683 aa23.96■■□□□ 1.43
CMTM3-201ENST00000361909 FMN2Q9NZ56 1722 aa23.96■■□□□ 1.43
CMTM3-201ENST00000361909 IQSEC2Q5JU85 1478 aa23.95■■□□□ 1.42
CMTM3-201ENST00000361909 NCBP3Q53F19 620 aaKnown RBP23.95■■□□□ 1.42
CMTM3-201ENST00000361909 WWC1Q8IX03 1113 aa23.95■■□□□ 1.42
CMTM3-201ENST00000361909 GRPEL1Q9HAV7 217 aa23.95■■□□□ 1.42
CMTM3-201ENST00000361909 TPM2P07951 284 aa23.94■■□□□ 1.42
CMTM3-201ENST00000361909 TNNT2P45379 298 aaPredicted RBP23.94■■□□□ 1.42
CMTM3-201ENST00000361909 MTHFSP49914 203 aa23.94■■□□□ 1.42
CMTM3-201ENST00000361909 ESPNB1AK53 854 aa23.93■■□□□ 1.42
CMTM3-201ENST00000361909 CFAP53Q96M91 514 aa23.93■■□□□ 1.42
CMTM3-201ENST00000361909 PANK2Q9BZ23 570 aa23.93■■□□□ 1.42
CMTM3-201ENST00000361909 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
CMTM3-201ENST00000361909 ACEP12821 1306 aa23.93■■□□□ 1.42
CMTM3-201ENST00000361909 RARSP54136 660 aaKnown RBP23.93■■□□□ 1.42
CMTM3-201ENST00000361909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.92■■□□□ 1.42
CMTM3-201ENST00000361909 ADGRL3Q9HAR2 1447 aa23.92■■□□□ 1.42
CMTM3-201ENST00000361909 C22orf23Q9BZE7 217 aa23.91■■□□□ 1.42
CMTM3-201ENST00000361909 NRKQ7Z2Y5 1582 aa23.91■■□□□ 1.42
CMTM3-201ENST00000361909 RGPD8O14715 1765 aaPredicted RBP23.9■■□□□ 1.42
CMTM3-201ENST00000361909 WDR63Q8IWG1 891 aa23.9■■□□□ 1.42
CMTM3-201ENST00000361909 CIZ1Q9ULV3 898 aaPredicted RBP23.9■■□□□ 1.42
CMTM3-201ENST00000361909 PCDHB15Q9Y5E8 787 aa23.9■■□□□ 1.42
CMTM3-201ENST00000361909 USP6P35125 1406 aa23.9■■□□□ 1.42
CMTM3-201ENST00000361909 NUTM2FA1L443 756 aa23.89■■□□□ 1.42
CMTM3-201ENST00000361909 HSCBQ8IWL3 235 aa23.89■■□□□ 1.42
CMTM3-201ENST00000361909 LMTK3Q96Q04 1460 aa23.89■■□□□ 1.42
CMTM3-201ENST00000361909 PHF23Q9BUL5 403 aaPredicted RBP23.89■■□□□ 1.41
CMTM3-201ENST00000361909 DMRT2Q9Y5R5 561 aa23.89■■□□□ 1.41
CMTM3-201ENST00000361909 SKOR2Q2VWA4 1001 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-201ENST00000361909 VSIG10Q8N0Z9 540 aa23.88■■□□□ 1.41
CMTM3-201ENST00000361909 TRIM44Q96DX7 344 aaPredicted RBP23.87■■□□□ 1.41
CMTM3-201ENST00000361909 ZMYND15Q9H091 742 aa23.87■■□□□ 1.41
CMTM3-201ENST00000361909 GZF1Q9H116 711 aaPredicted RBP23.87■■□□□ 1.41
CMTM3-201ENST00000361909 SSH2Q76I76 1423 aa23.87■■□□□ 1.41
CMTM3-201ENST00000361909 TTC21BQ7Z4L5 1316 aa23.87■■□□□ 1.41
CMTM3-201ENST00000361909 CCDC27Q2M243 656 aa23.86■■□□□ 1.41
CMTM3-201ENST00000361909 NME9Q86XW9 330 aa23.85■■□□□ 1.41
CMTM3-201ENST00000361909 AATKQ6ZMQ8 1374 aa23.85■■□□□ 1.41
CMTM3-201ENST00000361909 CT47B1P0C2W7 299 aaPredicted RBP23.85■■□□□ 1.41
CMTM3-201ENST00000361909 DDIT3P35638 169 aa23.85■■□□□ 1.41
CMTM3-201ENST00000361909 SNX21Q969T3 373 aa23.85■■□□□ 1.41
CMTM3-201ENST00000361909 RUNDC1Q96C34 613 aa23.85■■□□□ 1.41
CMTM3-201ENST00000361909 COG3Q96JB2 828 aa23.85■■□□□ 1.41
CMTM3-201ENST00000361909 TTC21AQ8NDW8 1320 aa23.84■■□□□ 1.41
CMTM3-201ENST00000361909 PNPLA6Q8IY17 1366 aa23.84■■□□□ 1.41
CMTM3-201ENST00000361909 HSPA2P54652 639 aa23.84■■□□□ 1.41
CMTM3-201ENST00000361909 GBP4Q96PP9 640 aa23.84■■□□□ 1.41
CMTM3-201ENST00000361909 NGDNQ8NEJ9 315 aaKnown RBP23.83■■□□□ 1.41
CMTM3-201ENST00000361909 MVPQ14764 893 aaKnown RBP23.82■■□□□ 1.4
CMTM3-201ENST00000361909 ARXQ96QS3 562 aa23.82■■□□□ 1.4
CMTM3-201ENST00000361909 PROSER2Q86WR7 435 aaPredicted RBP23.82■■□□□ 1.4
CMTM3-201ENST00000361909 HDAC1Q13547 482 aaPredicted RBP23.81■■□□□ 1.4
CMTM3-201ENST00000361909 COL3A1P02461 1466 aaPredicted RBP23.81■■□□□ 1.4
CMTM3-201ENST00000361909 MAP2P11137 1827 aaKnown RBP23.8■■□□□ 1.4
CMTM3-201ENST00000361909 RLBP1P12271 317 aa23.8■■□□□ 1.4
CMTM3-201ENST00000361909 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
CMTM3-201ENST00000361909 SMC5Q8IY18 1101 aa23.79■■□□□ 1.4
CMTM3-201ENST00000361909 RBM25P49756 843 aaKnown RBP23.79■■□□□ 1.4
CMTM3-201ENST00000361909 POLKQ9UBT6 870 aa23.79■■□□□ 1.4
CMTM3-201ENST00000361909 IBTKQ9P2D0 1353 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-201ENST00000361909 C14orf37Q86TY3 774 aa23.78■■□□□ 1.4
CMTM3-201ENST00000361909 PDCL3Q9H2J4 239 aa23.78■■□□□ 1.4
CMTM3-201ENST00000361909 OVOS2A0A0J9YW53 1432 aa23.78■■□□□ 1.4
CMTM3-201ENST00000361909 OVOS2Q6IE36 1432 aa23.78■■□□□ 1.4
CMTM3-201ENST00000361909 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
CMTM3-201ENST00000361909 TERF1P54274 439 aa23.77■■□□□ 1.4
CMTM3-201ENST00000361909 MFAP1P55081 439 aaKnown RBP23.77■■□□□ 1.4
CMTM3-201ENST00000361909 CCDC173Q0VFZ6 552 aa23.77■■□□□ 1.4
CMTM3-201ENST00000361909 C19orf44Q9H6X5 657 aa23.77■■□□□ 1.4
CMTM3-201ENST00000361909 ERBB4Q15303 1308 aa23.76■■□□□ 1.39
CMTM3-201ENST00000361909 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
CMTM3-201ENST00000361909 PHF8Q9UPP1 1060 aa23.76■■□□□ 1.39
CMTM3-201ENST00000361909 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
CMTM3-201ENST00000361909 USP31Q70CQ4 1352 aa23.76■■□□□ 1.39
CMTM3-201ENST00000361909 ZKSCAN2Q63HK3 967 aa23.76■■□□□ 1.39
CMTM3-201ENST00000361909 SPRYD3Q8NCJ5 442 aa23.75■■□□□ 1.39
CMTM3-201ENST00000361909 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
CMTM3-201ENST00000361909 CDK12Q9NYV4 1490 aaPredicted RBP23.73■■□□□ 1.39
CMTM3-201ENST00000361909 DCCP43146 1447 aa23.73■■□□□ 1.39
CMTM3-201ENST00000361909 RAB3GAP1Q15042 981 aa23.73■■□□□ 1.39
CMTM3-201ENST00000361909 PPP1R9BQ96SB3 815 aa23.73■■□□□ 1.39
CMTM3-201ENST00000361909 DZIP1LQ8IYY4 767 aaKnown RBP23.72■■□□□ 1.39
CMTM3-201ENST00000361909 FTSJ3Q8IY81 847 aaKnown RBP23.72■■□□□ 1.39
CMTM3-201ENST00000361909 TCP11L2Q8N4U5 519 aa23.72■■□□□ 1.39
CMTM3-201ENST00000361909 DDX19BQ9UMR2 479 aa23.71■■□□□ 1.39
CMTM3-201ENST00000361909 USP54Q70EL1 1684 aa23.71■■□□□ 1.39
CMTM3-201ENST00000361909 U2AF1L5P0DN76 240 aaPredicted RBP23.71■■□□□ 1.39
CMTM3-201ENST00000361909 U2AF1Q01081 240 aaKnown RBP eCLIP23.71■■□□□ 1.39
CMTM3-201ENST00000361909 TNPO1Q92973 898 aaKnown RBP23.71■■□□□ 1.39
CMTM3-201ENST00000361909 TMEM94Q12767 1356 aa23.71■■□□□ 1.39
CMTM3-201ENST00000361909 ESCO1Q5FWF5 840 aa23.7■■□□□ 1.38
CMTM3-201ENST00000361909 PIK3C2AO00443 1686 aa23.69■■□□□ 1.38
CMTM3-201ENST00000361909 ANP32BQ92688 251 aaKnown RBP23.69■■□□□ 1.38
CMTM3-201ENST00000361909 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms