RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 MBIPQ9NS73 344 aa19.57■□□□□ 0.72
CNKSR1-201ENST00000361530 SETD1AO15047 1707 aaKnown RBP19.57■□□□□ 0.72
CNKSR1-201ENST00000361530 METP08581 1390 aa19.56■□□□□ 0.72
CNKSR1-201ENST00000361530 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
CNKSR1-201ENST00000361530 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
CNKSR1-201ENST00000361530 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
CNKSR1-201ENST00000361530 ZNF853P0CG23 659 aa19.56■□□□□ 0.72
CNKSR1-201ENST00000361530 RRS1Q15050 365 aaKnown RBP19.55■□□□□ 0.72
CNKSR1-201ENST00000361530 EDC4Q6P2E9 1401 aaKnown RBP19.55■□□□□ 0.72
CNKSR1-201ENST00000361530 GNAI1P63096 354 aa19.55■□□□□ 0.72
CNKSR1-201ENST00000361530 IFT57Q9NWB7 429 aa19.55■□□□□ 0.72
CNKSR1-201ENST00000361530 NUDT16Q96DE0 195 aaKnown RBP19.55■□□□□ 0.72
CNKSR1-201ENST00000361530 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
CNKSR1-201ENST00000361530 FAM83GA6ND36 823 aa19.54■□□□□ 0.72
CNKSR1-201ENST00000361530 C8orf58Q8NAV2 365 aa19.54■□□□□ 0.72
CNKSR1-201ENST00000361530 ARHGAP45Q92619 1136 aa19.54■□□□□ 0.72
CNKSR1-201ENST00000361530 SPATA31D1Q6ZQQ2 1576 aa19.53■□□□□ 0.72
CNKSR1-201ENST00000361530 ANKRD45Q5TZF3 282 aa19.53■□□□□ 0.72
CNKSR1-201ENST00000361530 SIRT2Q8IXJ6 389 aa19.53■□□□□ 0.72
CNKSR1-201ENST00000361530 CALD1Q05682 793 aaKnown RBP19.53■□□□□ 0.72
CNKSR1-201ENST00000361530 CPS1P31327 1500 aa19.52■□□□□ 0.72
CNKSR1-201ENST00000361530 PIK3R4Q99570 1358 aa19.52■□□□□ 0.72
CNKSR1-201ENST00000361530 PTCH1Q13635 1447 aa19.52■□□□□ 0.71
CNKSR1-201ENST00000361530 AGLP35573 1532 aa19.52■□□□□ 0.71
CNKSR1-201ENST00000361530 TSPOAP1O95153 1857 aa19.52■□□□□ 0.71
CNKSR1-201ENST00000361530 DCTN1Q14203 1278 aa19.52■□□□□ 0.71
CNKSR1-201ENST00000361530 TWISTNBQ3B726 338 aaPredicted RBP19.52■□□□□ 0.71
CNKSR1-201ENST00000361530 COG3Q96JB2 828 aa19.51■□□□□ 0.71
CNKSR1-201ENST00000361530 CDK12Q9NYV4 1490 aaPredicted RBP19.51■□□□□ 0.71
CNKSR1-201ENST00000361530 AATKQ6ZMQ8 1374 aa19.51■□□□□ 0.71
CNKSR1-201ENST00000361530 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
CNKSR1-201ENST00000361530 CFAP44Q96MT7 982 aa19.5■□□□□ 0.71
CNKSR1-201ENST00000361530 CCDC61Q9Y6R9 512 aa19.5■□□□□ 0.71
CNKSR1-201ENST00000361530 ABCC4O15439 1325 aa19.5■□□□□ 0.71
CNKSR1-201ENST00000361530 RBM25P49756 843 aaKnown RBP19.5■□□□□ 0.71
CNKSR1-201ENST00000361530 MCM4P33991 863 aa19.49■□□□□ 0.71
CNKSR1-201ENST00000361530 BMP2KLQ5H9B9 411 aa19.49■□□□□ 0.71
CNKSR1-201ENST00000361530 CHMP5Q9NZZ3 219 aa19.49■□□□□ 0.71
CNKSR1-201ENST00000361530 GCC1Q96CN9 775 aa19.49■□□□□ 0.71
CNKSR1-201ENST00000361530 REREQ9P2R6 1566 aa19.49■□□□□ 0.71
CNKSR1-201ENST00000361530 DIP2BQ9P265 1576 aa19.48■□□□□ 0.71
CNKSR1-201ENST00000361530 HSCBQ8IWL3 235 aa19.47■□□□□ 0.71
CNKSR1-201ENST00000361530 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
CNKSR1-201ENST00000361530 FAM43AQ8N2R8 423 aa19.47■□□□□ 0.71
CNKSR1-201ENST00000361530 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
CNKSR1-201ENST00000361530 DLG5Q8TDM6 1919 aa19.46■□□□□ 0.71
CNKSR1-201ENST00000361530 AEBP1Q8IUX7 1158 aa19.46■□□□□ 0.71
CNKSR1-201ENST00000361530 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.45■□□□□ 0.7
CNKSR1-201ENST00000361530 ARXQ96QS3 562 aa19.45■□□□□ 0.7
CNKSR1-201ENST00000361530 CHMP4BQ9H444 224 aaKnown RBP19.45■□□□□ 0.7
CNKSR1-201ENST00000361530 LMOD3Q0VAK6 560 aa19.45■□□□□ 0.7
CNKSR1-201ENST00000361530 KIF2CQ99661 725 aa19.44■□□□□ 0.7
CNKSR1-201ENST00000361530 KRT24Q2M2I5 525 aa19.43■□□□□ 0.7
CNKSR1-201ENST00000361530 DDIT3P35638 169 aa19.43■□□□□ 0.7
CNKSR1-201ENST00000361530 TBC1D9Q6ZT07 1266 aa19.43■□□□□ 0.7
CNKSR1-201ENST00000361530 SNX21Q969T3 373 aa19.43■□□□□ 0.7
CNKSR1-201ENST00000361530 API5Q9BZZ5 524 aaKnown RBP19.42■□□□□ 0.7
CNKSR1-201ENST00000361530 GZF1Q9H116 711 aaPredicted RBP19.42■□□□□ 0.7
CNKSR1-201ENST00000361530 EIF4A2Q14240 407 aaKnown RBP19.42■□□□□ 0.7
CNKSR1-201ENST00000361530 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
CNKSR1-201ENST00000361530 NCOA3Q9Y6Q9 1424 aa19.42■□□□□ 0.7
CNKSR1-201ENST00000361530 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
CNKSR1-201ENST00000361530 SIRT1Q96EB6 747 aa19.41■□□□□ 0.7
CNKSR1-201ENST00000361530 TECPR2O15040 1411 aa19.4■□□□□ 0.7
CNKSR1-201ENST00000361530 CD2BP2O95400 341 aaKnown RBP19.4■□□□□ 0.7
CNKSR1-201ENST00000361530 C3P01024 1663 aa19.4■□□□□ 0.7
CNKSR1-201ENST00000361530 NUTM2FA1L443 756 aa19.39■□□□□ 0.7
CNKSR1-201ENST00000361530 TRAK2O60296 914 aa19.39■□□□□ 0.7
CNKSR1-201ENST00000361530 ROBO2Q9HCK4 1378 aa19.39■□□□□ 0.7
CNKSR1-201ENST00000361530 MCM10Q7L590 875 aa19.38■□□□□ 0.69
CNKSR1-201ENST00000361530 RBM42Q9BTD8 480 aaKnown RBP19.38■□□□□ 0.69
CNKSR1-201ENST00000361530 TTC21BQ7Z4L5 1316 aa19.38■□□□□ 0.69
CNKSR1-201ENST00000361530 KNDC1Q76NI1 1749 aa19.38■□□□□ 0.69
CNKSR1-201ENST00000361530 GSPT1P15170 499 aaKnown RBP19.38■□□□□ 0.69
CNKSR1-201ENST00000361530 L1TD1Q5T7N2 865 aaKnown RBP19.38■□□□□ 0.69
CNKSR1-201ENST00000361530 ESF1Q9H501 851 aaKnown RBP19.38■□□□□ 0.69
CNKSR1-201ENST00000361530 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
CNKSR1-201ENST00000361530 HSP90AB2PQ58FF8 381 aa19.37■□□□□ 0.69
CNKSR1-201ENST00000361530 PLEKHM2Q8IWE5 1019 aa19.37■□□□□ 0.69
CNKSR1-201ENST00000361530 C16orf71Q8IYS4 520 aaPredicted RBP19.37■□□□□ 0.69
CNKSR1-201ENST00000361530 DCTPP1Q9H773 170 aa19.37■□□□□ 0.69
CNKSR1-201ENST00000361530 FSD2A1L4K1 749 aa19.36■□□□□ 0.69
CNKSR1-201ENST00000361530 HSP90AB1P08238 724 aaKnown RBP19.36■□□□□ 0.69
CNKSR1-201ENST00000361530 XRCC6P12956 609 aaKnown RBP eCLIP19.36■□□□□ 0.69
CNKSR1-201ENST00000361530 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
CNKSR1-201ENST00000361530 ACEP12821 1306 aa19.36■□□□□ 0.69
CNKSR1-201ENST00000361530 CHL1O00533 1208 aa19.36■□□□□ 0.69
CNKSR1-201ENST00000361530 HDGFP51858 240 aaKnown RBP19.35■□□□□ 0.69
CNKSR1-201ENST00000361530 RGS12O14924 1447 aa19.34■□□□□ 0.69
CNKSR1-201ENST00000361530 ITSN1Q15811 1721 aa19.34■□□□□ 0.69
CNKSR1-201ENST00000361530 GOLGA6L3A6NEY3 463 aa19.34■□□□□ 0.69
CNKSR1-201ENST00000361530 TNPO1Q92973 898 aaKnown RBP19.34■□□□□ 0.69
CNKSR1-201ENST00000361530 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
CNKSR1-201ENST00000361530 KIF24Q5T7B8 1368 aa19.34■□□□□ 0.69
CNKSR1-201ENST00000361530 SOX12O15370 315 aa19.34■□□□□ 0.69
CNKSR1-201ENST00000361530 CDC45O75419 566 aa19.33■□□□□ 0.69
CNKSR1-201ENST00000361530 RRAGDQ9NQL2 400 aaPredicted RBP19.33■□□□□ 0.68
CNKSR1-201ENST00000361530 TMEM2Q9UHN6 1383 aa19.33■□□□□ 0.68
CNKSR1-201ENST00000361530 NRKQ7Z2Y5 1582 aa19.32■□□□□ 0.68
CNKSR1-201ENST00000361530 OTUD7AQ8TE49 926 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms