RNA–Protein interactions for RNA: ENST00000359632.7

HPS1-203, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 978 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-203ENST00000359632 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
HPS1-203ENST00000359632 MAP3K5Q99683 1374 aa18.8■□□□□ 0.6
HPS1-203ENST00000359632 LRRC37A3O60309 1634 aa18.79■□□□□ 0.6
HPS1-203ENST00000359632 DDB1Q16531 1140 aa18.79■□□□□ 0.6
HPS1-203ENST00000359632 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
HPS1-203ENST00000359632 KLHL34Q8N239 644 aa18.78■□□□□ 0.6
HPS1-203ENST00000359632 CPDO75976 1380 aa18.78■□□□□ 0.6
HPS1-203ENST00000359632 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.6
HPS1-203ENST00000359632 ITSN1Q15811 1721 aa18.77■□□□□ 0.6
HPS1-203ENST00000359632 GOLGB1Q14789 3259 aaKnown RBP18.77■□□□□ 0.6
HPS1-203ENST00000359632 CRB1P82279 1406 aa18.77■□□□□ 0.6
HPS1-203ENST00000359632 TRPM1Q7Z4N2 1603 aa18.77■□□□□ 0.6
HPS1-203ENST00000359632 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
HPS1-203ENST00000359632 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
HPS1-203ENST00000359632 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
HPS1-203ENST00000359632 ABTB2Q8N961 1025 aa18.73■□□□□ 0.59
HPS1-203ENST00000359632 MARCH10Q8NA82 808 aaPredicted RBP18.73■□□□□ 0.59
HPS1-203ENST00000359632 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
HPS1-203ENST00000359632 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
HPS1-203ENST00000359632 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
HPS1-203ENST00000359632 USP19O94966 1318 aa18.72■□□□□ 0.59
HPS1-203ENST00000359632 HSPA6P17066 643 aa18.71■□□□□ 0.59
HPS1-203ENST00000359632 ACEP12821 1306 aa18.71■□□□□ 0.59
HPS1-203ENST00000359632 TOM1L2Q6ZVM7 507 aa18.7■□□□□ 0.58
HPS1-203ENST00000359632 CCDC61Q9Y6R9 512 aa18.7■□□□□ 0.58
HPS1-203ENST00000359632 AATKQ6ZMQ8 1374 aa18.69■□□□□ 0.58
HPS1-203ENST00000359632 BCL9O00512 1426 aa18.69■□□□□ 0.58
HPS1-203ENST00000359632 GCP02774 474 aa18.69■□□□□ 0.58
HPS1-203ENST00000359632 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
HPS1-203ENST00000359632 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
HPS1-203ENST00000359632 PLEKHG3A1L390 1219 aa18.68■□□□□ 0.58
HPS1-203ENST00000359632 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
HPS1-203ENST00000359632 ATP10DQ9P241 1426 aa18.67■□□□□ 0.58
HPS1-203ENST00000359632 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
HPS1-203ENST00000359632 NLRP13Q86W25 1043 aa18.66■□□□□ 0.58
HPS1-203ENST00000359632 NLGN2Q8NFZ4 835 aa18.65■□□□□ 0.58
HPS1-203ENST00000359632 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
HPS1-203ENST00000359632 PPIP5K1Q6PFW1 1433 aa18.65■□□□□ 0.58
HPS1-203ENST00000359632 POLD1P28340 1107 aa18.64■□□□□ 0.57
HPS1-203ENST00000359632 ZNF827Q17R98 1081 aa18.64■□□□□ 0.57
HPS1-203ENST00000359632 GPBP1L1Q9HC44 474 aaPredicted RBP18.64■□□□□ 0.57
HPS1-203ENST00000359632 CABP1Q9NZU7 370 aa18.64■□□□□ 0.57
HPS1-203ENST00000359632 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
HPS1-203ENST00000359632 YBX3P16989 372 aaKnown RBP eCLIP18.63■□□□□ 0.571e-9■■■□□ 15.6
HPS1-203ENST00000359632 CDCA7Q9BWT1 371 aaPredicted RBP18.63■□□□□ 0.57
HPS1-203ENST00000359632 GRIN3BO60391 1043 aa18.62■□□□□ 0.57
HPS1-203ENST00000359632 ZNF526Q8TF50 670 aaPredicted RBP18.61■□□□□ 0.57
HPS1-203ENST00000359632 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
HPS1-203ENST00000359632 ACSBG1Q96GR2 724 aa18.6■□□□□ 0.57
HPS1-203ENST00000359632 TONSLQ96HA7 1378 aa18.58■□□□□ 0.57
HPS1-203ENST00000359632 EVC2Q86UK5 1308 aa18.58■□□□□ 0.57
HPS1-203ENST00000359632 EXOC5O00471 708 aa18.58■□□□□ 0.56
HPS1-203ENST00000359632 NHSQ6T4R5 1651 aa18.57■□□□□ 0.56
HPS1-203ENST00000359632 SLC16A10Q8TF71 515 aa18.57■□□□□ 0.56
HPS1-203ENST00000359632 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
HPS1-203ENST00000359632 CAPN15O75808 1086 aa18.56■□□□□ 0.56
HPS1-203ENST00000359632 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
HPS1-203ENST00000359632 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
HPS1-203ENST00000359632 CSB-PGBD3P0DP91 1061 aa18.55■□□□□ 0.56
HPS1-203ENST00000359632 NLRP6P59044 892 aa18.55■□□□□ 0.56
HPS1-203ENST00000359632 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
HPS1-203ENST00000359632 TNS2Q63HR2 1409 aa18.55■□□□□ 0.56
HPS1-203ENST00000359632 USP6P35125 1406 aa18.54■□□□□ 0.56
HPS1-203ENST00000359632 SLIT3O75094 1523 aa18.54■□□□□ 0.56
HPS1-203ENST00000359632 PNPLA7Q6ZV29 1317 aa18.53■□□□□ 0.56
HPS1-203ENST00000359632 COL18A1P39060 1754 aa18.53■□□□□ 0.56
HPS1-203ENST00000359632 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
HPS1-203ENST00000359632 CARD10Q9BWT7 1032 aa18.53■□□□□ 0.56
HPS1-203ENST00000359632 ADCY9O60503 1353 aa18.53■□□□□ 0.56
HPS1-203ENST00000359632 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.55
HPS1-203ENST00000359632 PIK3C2AO00443 1686 aa18.51■□□□□ 0.55
HPS1-203ENST00000359632 CPSF1Q10570 1443 aaKnown RBP18.51■□□□□ 0.55
HPS1-203ENST00000359632 BTAF1O14981 1849 aa18.51■□□□□ 0.55
HPS1-203ENST00000359632 APLP1P51693 650 aa18.49■□□□□ 0.55
HPS1-203ENST00000359632 TFCP2L1Q9NZI6 479 aa18.49■□□□□ 0.55
HPS1-203ENST00000359632 RGPD5Q99666 1765 aa18.49■□□□□ 0.55
HPS1-203ENST00000359632 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
HPS1-203ENST00000359632 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
HPS1-203ENST00000359632 KAT6BQ8WYB5 2073 aa18.48■□□□□ 0.55
HPS1-203ENST00000359632 TTC21BQ7Z4L5 1316 aa18.48■□□□□ 0.55
HPS1-203ENST00000359632 SOX12O15370 315 aa18.47■□□□□ 0.55
HPS1-203ENST00000359632 COL13A1Q5TAT6 717 aaPredicted RBP18.47■□□□□ 0.55
HPS1-203ENST00000359632 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
HPS1-203ENST00000359632 ABCC6O95255 1503 aa18.47■□□□□ 0.55
HPS1-203ENST00000359632 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
HPS1-203ENST00000359632 SLC12A5Q9H2X9 1139 aa18.46■□□□□ 0.55
HPS1-203ENST00000359632 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
HPS1-203ENST00000359632 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
HPS1-203ENST00000359632 SBNO2Q9Y2G9 1366 aa18.45■□□□□ 0.54
HPS1-203ENST00000359632 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
HPS1-203ENST00000359632 KIF3CO14782 793 aa18.45■□□□□ 0.54
HPS1-203ENST00000359632 KCNQ4P56696 695 aa18.45■□□□□ 0.54
HPS1-203ENST00000359632 ARHGEF25Q86VW2 580 aa18.45■□□□□ 0.54
HPS1-203ENST00000359632 KTN1Q86UP2 1357 aaKnown RBP18.44■□□□□ 0.54
HPS1-203ENST00000359632 SLC27A3Q5K4L6 730 aa18.44■□□□□ 0.54
HPS1-203ENST00000359632 DNAJC5GQ8N7S2 189 aa18.44■□□□□ 0.54
HPS1-203ENST00000359632 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
HPS1-203ENST00000359632 CD163L1Q9NR16 1453 aa18.44■□□□□ 0.54
HPS1-203ENST00000359632 MSH5O43196 834 aa18.43■□□□□ 0.54
HPS1-203ENST00000359632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms