RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 AIMP1Q12904 312 aaKnown RBP22.64■■□□□ 1.21
BRPF3-202ENST00000357641 DDX11Q96FC9 970 aa22.64■■□□□ 1.21
BRPF3-202ENST00000357641 TIGD1Q96MW7 591 aa22.64■■□□□ 1.21
BRPF3-202ENST00000357641 CCDC148Q8NFR7 591 aa22.64■■□□□ 1.21
BRPF3-202ENST00000357641 EPB41L2O43491 1005 aaKnown RBP22.63■■□□□ 1.21
BRPF3-202ENST00000357641 HIP1O00291 1037 aa22.63■■□□□ 1.21
BRPF3-202ENST00000357641 DYNC1I1O14576 645 aa22.63■■□□□ 1.21
BRPF3-202ENST00000357641 C16orf45Q96MC5 204 aaPredicted RBP22.63■■□□□ 1.21
BRPF3-202ENST00000357641 MEX3CQ5U5Q3 659 aaKnown RBP22.63■■□□□ 1.21
BRPF3-202ENST00000357641 RAPGEF2Q9Y4G8 1499 aa22.63■■□□□ 1.21
BRPF3-202ENST00000357641 CHD1LQ86WJ1 897 aa22.62■■□□□ 1.21
BRPF3-202ENST00000357641 RIC3Q7Z5B4 369 aa22.62■■□□□ 1.21
BRPF3-202ENST00000357641 TANGO6Q9C0B7 1094 aa22.62■■□□□ 1.21
BRPF3-202ENST00000357641 ANKRD1Q15327 319 aa22.62■■□□□ 1.21
BRPF3-202ENST00000357641 ANKRD18AQ8IVF6 992 aa22.62■■□□□ 1.21
BRPF3-202ENST00000357641 SMTNL1A8MU46 457 aa22.61■■□□□ 1.21
BRPF3-202ENST00000357641 TXLNBQ8N3L3 684 aa22.61■■□□□ 1.21
BRPF3-202ENST00000357641 GNAI3P08754 354 aa22.61■■□□□ 1.21
BRPF3-202ENST00000357641 GTF2A1P52655 376 aaPredicted RBP22.61■■□□□ 1.21
BRPF3-202ENST00000357641 SART3Q15020 963 aaKnown RBP22.61■■□□□ 1.21
BRPF3-202ENST00000357641 KIAA1328Q86T90 577 aa22.61■■□□□ 1.21
BRPF3-202ENST00000357641 CCAR1Q8IX12 1150 aaKnown RBP22.61■■□□□ 1.21
BRPF3-202ENST00000357641 CFAP100Q494V2 611 aa22.61■■□□□ 1.21
BRPF3-202ENST00000357641 CARMIL2Q6F5E8 1435 aa22.61■■□□□ 1.21
BRPF3-202ENST00000357641 GOLGA6L10A0A0M3HER8 536 aa22.6■■□□□ 1.21
BRPF3-202ENST00000357641 SFPQP23246 707 aaKnown RBP eCLIP22.6■■□□□ 1.21
BRPF3-202ENST00000357641 SAMD1Q6SPF0 538 aaPredicted RBP22.6■■□□□ 1.21
BRPF3-202ENST00000357641 USP25Q9UHP3 1055 aa22.6■■□□□ 1.21
BRPF3-202ENST00000357641 MAP2K1Q02750 393 aaPredicted RBP22.6■■□□□ 1.21
BRPF3-202ENST00000357641 SKAP1Q86WV1 359 aa22.6■■□□□ 1.21
BRPF3-202ENST00000357641 TSR2Q969E8 191 aaKnown RBP22.59■■□□□ 1.21
BRPF3-202ENST00000357641 TRMT1Q9NXH9 659 aaKnown RBP22.59■■□□□ 1.21
BRPF3-202ENST00000357641 PPP2R1AP30153 589 aa22.59■■□□□ 1.21
BRPF3-202ENST00000357641 PDRG1Q9NUG6 133 aa22.59■■□□□ 1.21
BRPF3-202ENST00000357641 JAKMIP3Q5VZ66 844 aa22.59■■□□□ 1.21
BRPF3-202ENST00000357641 CLIP2Q9UDT6 1046 aa22.59■■□□□ 1.21
BRPF3-202ENST00000357641 LMAN1P49257 510 aa22.58■■□□□ 1.21
BRPF3-202ENST00000357641 STIM1Q13586 685 aa22.58■■□□□ 1.21
BRPF3-202ENST00000357641 CCDC183Q5T5S1 534 aa22.58■■□□□ 1.21
BRPF3-202ENST00000357641 TMX1Q9H3N1 280 aa22.58■■□□□ 1.21
BRPF3-202ENST00000357641 ZSCAN12O43309 604 aa22.58■■□□□ 1.2
BRPF3-202ENST00000357641 CFAP45Q9UL16 551 aa22.58■■□□□ 1.2
BRPF3-202ENST00000357641 FAM107BQ9H098 131 aa22.58■■□□□ 1.2
BRPF3-202ENST00000357641 KRT18P05783 430 aaKnown RBP22.57■■□□□ 1.2
BRPF3-202ENST00000357641 MVPQ14764 893 aaKnown RBP22.57■■□□□ 1.2
BRPF3-202ENST00000357641 MAP9Q49MG5 647 aa22.57■■□□□ 1.2
BRPF3-202ENST00000357641 GGNBP2Q9H3C7 697 aa22.57■■□□□ 1.2
BRPF3-202ENST00000357641 EZRP15311 586 aaKnown RBP22.56■■□□□ 1.2
BRPF3-202ENST00000357641 SSFA2P28290 1259 aa22.56■■□□□ 1.2
BRPF3-202ENST00000357641 SLC26A8Q96RN1 970 aa22.56■■□□□ 1.2
BRPF3-202ENST00000357641 GNAI2P04899 355 aa22.56■■□□□ 1.2
BRPF3-202ENST00000357641 MICALCLQ6ZW33 695 aa22.56■■□□□ 1.2
BRPF3-202ENST00000357641 TNPO1Q92973 898 aaKnown RBP22.56■■□□□ 1.2
BRPF3-202ENST00000357641 MTHFSP49914 203 aa22.55■■□□□ 1.2
BRPF3-202ENST00000357641 EID1Q9Y6B2 187 aa22.54■■□□□ 1.2
BRPF3-202ENST00000357641 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
BRPF3-202ENST00000357641 JAKMIP1Q96N16 626 aaKnown RBP22.54■■□□□ 1.2
BRPF3-202ENST00000357641 CCDC113Q9H0I3 377 aa22.54■■□□□ 1.2
BRPF3-202ENST00000357641 MNAT1P51948 309 aa22.54■■□□□ 1.2
BRPF3-202ENST00000357641 KIF4BQ2VIQ3 1234 aa22.54■■□□□ 1.2
BRPF3-202ENST00000357641 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
BRPF3-202ENST00000357641 TAF4BQ92750 862 aa22.54■■□□□ 1.2
BRPF3-202ENST00000357641 KIF5CO60282 957 aa22.53■■□□□ 1.2
BRPF3-202ENST00000357641 GBP2P32456 591 aaPredicted RBP22.53■■□□□ 1.2
BRPF3-202ENST00000357641 PPP6R1Q9UPN7 881 aa22.53■■□□□ 1.2
BRPF3-202ENST00000357641 ZSCAN31Q96LW9 406 aaPredicted RBP22.53■■□□□ 1.2
BRPF3-202ENST00000357641 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
BRPF3-202ENST00000357641 MCM5P33992 734 aa22.52■■□□□ 1.2
BRPF3-202ENST00000357641 CCDC184Q52MB2 194 aa22.52■■□□□ 1.2
BRPF3-202ENST00000357641 SMARCC1Q92922 1105 aaPredicted RBP22.52■■□□□ 1.2
BRPF3-202ENST00000357641 CNKSR2Q8WXI2 1034 aa22.52■■□□□ 1.19
BRPF3-202ENST00000357641 CLCN1P35523 988 aa22.51■■□□□ 1.19
BRPF3-202ENST00000357641 IRX3P78415 501 aaPredicted RBP22.51■■□□□ 1.19
BRPF3-202ENST00000357641 DNAAF4Q8WXU2 420 aa22.51■■□□□ 1.19
BRPF3-202ENST00000357641 SEPT11Q9NVA2 429 aaKnown RBP22.51■■□□□ 1.19
BRPF3-202ENST00000357641 BMS1Q14692 1282 aaKnown RBP22.51■■□□□ 1.19
BRPF3-202ENST00000357641 TBC1D2Q9BYX2 928 aa22.51■■□□□ 1.19
BRPF3-202ENST00000357641 RAI14Q9P0K7 980 aa22.51■■□□□ 1.19
BRPF3-202ENST00000357641 EIF5P55010 431 aaKnown RBP22.51■■□□□ 1.19
BRPF3-202ENST00000357641 ADCY5O95622 1261 aa22.5■■□□□ 1.19
BRPF3-202ENST00000357641 BLOC1S2Q6QNY1 142 aa22.5■■□□□ 1.19
BRPF3-202ENST00000357641 CCDC30Q5VVM6 783 aa22.5■■□□□ 1.19
BRPF3-202ENST00000357641 FERMT3Q86UX7 667 aa22.5■■□□□ 1.19
BRPF3-202ENST00000357641 PRIMPOLQ96LW4 560 aa22.5■■□□□ 1.19
BRPF3-202ENST00000357641 TBC1D2BQ9UPU7 963 aa22.5■■□□□ 1.19
BRPF3-202ENST00000357641 MCM3P25205 808 aa22.5■■□□□ 1.19
BRPF3-202ENST00000357641 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
BRPF3-202ENST00000357641 BCCIPQ9P287 314 aaKnown RBP eCLIP22.49■■□□□ 1.19
BRPF3-202ENST00000357641 ERC1Q8IUD2 1116 aa22.49■■□□□ 1.19
BRPF3-202ENST00000357641 MIA2Q96PC5 1412 aa22.49■■□□□ 1.19
BRPF3-202ENST00000357641 ZHX3Q9H4I2 956 aa22.49■■□□□ 1.19
BRPF3-202ENST00000357641 KRT222Q8N1A0 295 aa22.48■■□□□ 1.19
BRPF3-202ENST00000357641 ATF7IPQ6VMQ6 1270 aa22.48■■□□□ 1.19
BRPF3-202ENST00000357641 CWC27Q6UX04 472 aaKnown RBP22.48■■□□□ 1.19
BRPF3-202ENST00000357641 TRIM22Q8IYM9 498 aa22.47■■□□□ 1.19
BRPF3-202ENST00000357641 ERCC6Q03468 1493 aa22.47■■□□□ 1.19
BRPF3-202ENST00000357641 ANO10Q9NW15 660 aa22.47■■□□□ 1.19
BRPF3-202ENST00000357641 CTR9Q6PD62 1173 aa22.47■■□□□ 1.19
BRPF3-202ENST00000357641 TOP1P11387 765 aaKnown RBP22.46■■□□□ 1.19
BRPF3-202ENST00000357641 CASTP20810 708 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms