RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 EIF3JO75822 258 aaKnown RBP7.65□□□□□ -1.19
UPF2-201ENST00000356352 KRT32Q14532 448 aa7.65□□□□□ -1.19
UPF2-201ENST00000356352 AXDND1Q5T1B0 1012 aaPredicted RBP7.65□□□□□ -1.19
UPF2-201ENST00000356352 SYNJ2O15056 1496 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 TRAK2O60296 914 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 MTHFSP49914 203 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 FGD5Q6ZNL6 1462 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 KRT85P78386 507 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 TCP11L2Q8N4U5 519 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 TSPYL1Q9H0U9 437 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 KIF21BO75037 1637 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 CASKIN1Q8WXD9 1431 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 KIAA0754O94854 1291 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 PRKAR2BP31323 418 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 GBP2P32456 591 aaPredicted RBP7.64□□□□□ -1.19
UPF2-201ENST00000356352 NFKBIBQ15653 356 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 PROSER2Q86WR7 435 aaPredicted RBP7.64□□□□□ -1.19
UPF2-201ENST00000356352 CEP131Q9UPN4 1083 aa7.64□□□□□ -1.19
UPF2-201ENST00000356352 POTEJP0CG39 1038 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 BRPF1P55201 1214 aaPredicted RBP7.63□□□□□ -1.19
UPF2-201ENST00000356352 JAKMIP3Q5VZ66 844 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 THEMISQ8N1K5 641 aaPredicted RBP7.63□□□□□ -1.19
UPF2-201ENST00000356352 TANGO6Q9C0B7 1094 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 TNMDQ9H2S6 317 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 MPHOSPH10O00566 681 aaKnown RBP7.63□□□□□ -1.19
UPF2-201ENST00000356352 ATP2B1P20020 1258 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 HDGFL1Q5TGJ6 251 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 ZNF287Q9HBT7 754 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 CFAP45Q9UL16 551 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 WDR63Q8IWG1 891 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 MPHOSPH8Q99549 860 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 PPP2R1AP30153 589 aa7.63□□□□□ -1.19
UPF2-201ENST00000356352 SMTNL1A8MU46 457 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 PRPF40AO75400 957 aaKnown RBP7.62□□□□□ -1.19
UPF2-201ENST00000356352 NUTM2GQ5VZR2 741 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 TXNDC2Q86VQ3 553 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 LRRC9Q6ZRR7 1453 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 NEBLO76041 1014 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 ATP2B2Q01814 1243 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 ZNF428Q96B54 188 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 NCOA2Q15596 1464 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 EXOSC9Q06265 439 aaKnown RBP7.62□□□□□ -1.19
UPF2-201ENST00000356352 ENOX2Q16206 610 aaKnown RBP7.62□□□□□ -1.19
UPF2-201ENST00000356352 UBAC1Q9BSL1 405 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 PPP6R1Q9UPN7 881 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 PDZRN3Q9UPQ7 1066 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 ME1P48163 572 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 TNIP1Q15025 636 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 RNF214Q8ND24 703 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 RPGRIP1LQ68CZ1 1315 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 POGZQ7Z3K3 1410 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 FAM177BA6PVY3 158 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 FIBPO43427 364 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 PPP1R12BO60237 982 aaPredicted RBP7.62□□□□□ -1.19
UPF2-201ENST00000356352 CETN2P41208 172 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 CEP57L1Q8IYX8 460 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 ADAMTS8Q9UP79 889 aa7.62□□□□□ -1.19
UPF2-201ENST00000356352 ANKRD62A6NC57 917 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 SLC4A2P04920 1241 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 FMNL2Q96PY5 1086 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 K7ELQ4 463 aaPredicted RBP7.61□□□□□ -1.19
UPF2-201ENST00000356352 KDM4AO75164 1064 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 ZHX3Q9H4I2 956 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 INCENPQ9NQS7 918 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 NOB1Q9ULX3 412 aaKnown RBP7.61□□□□□ -1.19
UPF2-201ENST00000356352 TOM1L2Q6ZVM7 507 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 TMOD2Q9NZR1 351 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 ATAD2Q6PL18 1390 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 ZNF76P36508 570 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 ZNF397Q8NF99 534 aaPredicted RBP7.61□□□□□ -1.19
UPF2-201ENST00000356352 TAF4BQ92750 862 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 STRN4Q9NRL3 753 aa7.61□□□□□ -1.19
UPF2-201ENST00000356352 RBM5P52756 815 aaKnown RBP eCLIP7.6□□□□□ -1.19
UPF2-201ENST00000356352 ZNF530Q6P9A1 599 aaPredicted RBP7.6□□□□□ -1.19
UPF2-201ENST00000356352 BLOC1S2Q6QNY1 142 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 CCDC112Q8NEF3 446 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 EHBP1L1Q8N3D4 1523 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 IGHMBP2P38935 993 aaKnown RBP7.6□□□□□ -1.19
UPF2-201ENST00000356352 USP8P40818 1118 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 TDO2P48775 406 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 NUP133Q8WUM0 1156 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 CIZ1Q9ULV3 898 aaPredicted RBP7.6□□□□□ -1.19
UPF2-201ENST00000356352 RTEL1-TNFRSF6BF6WH68 1400 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 DAPK1P53355 1430 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 SKIDA1Q1XH10 827 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 PDRG1Q9NUG6 133 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 LARP1BQ659C4 914 aaKnown RBP7.6□□□□□ -1.19
UPF2-201ENST00000356352 CCDC91Q7Z6B0 441 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 PRAM1Q96QH2 718 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 SLC52A1Q9NWF4 448 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 GRIN2BQ13224 1484 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 TMEM132EQ6IEE7 984 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 PPP4R3AQ6IN85 833 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 SPATA32Q96LK8 384 aa7.6□□□□□ -1.19
UPF2-201ENST00000356352 PHAXQ9H814 394 aaKnown RBP7.6□□□□□ -1.19
UPF2-201ENST00000356352 IGF1RP08069 1367 aa7.59□□□□□ -1.19
UPF2-201ENST00000356352 WDHD1O75717 1129 aaPredicted RBP7.59□□□□□ -1.19
UPF2-201ENST00000356352 MATR3P43243 847 aaKnown RBP eCLIP7.59□□□□□ -1.195e-8■■■■□ 26.3
UPF2-201ENST00000356352 CCDC148Q8NFR7 591 aa7.59□□□□□ -1.19
UPF2-201ENST00000356352 GBP3Q9H0R5 595 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms