RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RBM27Q9P2N5 1060 aaKnown RBP19.27■□□□□ 0.68
RTN3-205ENST00000356000 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.67
RTN3-205ENST00000356000 AEBP1Q8IUX7 1158 aa19.26■□□□□ 0.67
RTN3-205ENST00000356000 CTNNA3Q9UI47 895 aa19.26■□□□□ 0.67
RTN3-205ENST00000356000 DAPK1P53355 1430 aa19.26■□□□□ 0.67
RTN3-205ENST00000356000 DDX41Q9UJV9 622 aaKnown RBP19.26■□□□□ 0.67
RTN3-205ENST00000356000 CLTCQ00610 1675 aaKnown RBP19.26■□□□□ 0.67
RTN3-205ENST00000356000 CYP2E1P05181 493 aaPredicted RBP19.25■□□□□ 0.67
RTN3-205ENST00000356000 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
RTN3-205ENST00000356000 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
RTN3-205ENST00000356000 CEP170BQ9Y4F5 1589 aaPredicted RBP19.25■□□□□ 0.67
RTN3-205ENST00000356000 RIOK3O14730 519 aaKnown RBP19.25■□□□□ 0.67
RTN3-205ENST00000356000 MORC2Q9Y6X9 1032 aaPredicted RBP19.25■□□□□ 0.67
RTN3-205ENST00000356000 SYCE3A1L190 88 aa19.24■□□□□ 0.67
RTN3-205ENST00000356000 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
RTN3-205ENST00000356000 NUCB2P80303 420 aa19.24■□□□□ 0.67
RTN3-205ENST00000356000 CAMSAP1Q5T5Y3 1602 aa19.24■□□□□ 0.67
RTN3-205ENST00000356000 GEMIN8Q9NWZ8 242 aaKnown RBP19.24■□□□□ 0.67
RTN3-205ENST00000356000 TMEM63CQ9P1W3 806 aa19.24■□□□□ 0.67
RTN3-205ENST00000356000 RLBP1P12271 317 aa19.23■□□□□ 0.67
RTN3-205ENST00000356000 SYCP1Q15431 976 aa19.23■□□□□ 0.67
RTN3-205ENST00000356000 A2ML1A8K2U0 1454 aa19.23■□□□□ 0.67
RTN3-205ENST00000356000 AK9Q5TCS8 1911 aa19.23■□□□□ 0.67
RTN3-205ENST00000356000 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
RTN3-205ENST00000356000 PSEN1P49768 467 aa19.22■□□□□ 0.67
RTN3-205ENST00000356000 MAST1Q9Y2H9 1570 aa19.22■□□□□ 0.67
RTN3-205ENST00000356000 KIF16BQ96L93 1317 aa19.22■□□□□ 0.67
RTN3-205ENST00000356000 ZC3H13Q5T200 1668 aaKnown RBP19.22■□□□□ 0.67
RTN3-205ENST00000356000 FAM193AP78312 1265 aa19.21■□□□□ 0.67
RTN3-205ENST00000356000 RNF214Q8ND24 703 aa19.21■□□□□ 0.67
RTN3-205ENST00000356000 EFCC1Q9HA90 598 aa19.21■□□□□ 0.67
RTN3-205ENST00000356000 SOX12O15370 315 aa19.21■□□□□ 0.67
RTN3-205ENST00000356000 CHAF1AQ13111 956 aaPredicted RBP19.21■□□□□ 0.67
RTN3-205ENST00000356000 NGEFQ8N5V2 710 aa19.21■□□□□ 0.67
RTN3-205ENST00000356000 KDM5DQ9BY66 1539 aa19.21■□□□□ 0.67
RTN3-205ENST00000356000 APAF1O14727 1248 aa19.21■□□□□ 0.66
RTN3-205ENST00000356000 C17orf53Q8N3J3 647 aaPredicted RBP19.21■□□□□ 0.66
RTN3-205ENST00000356000 DNMT1P26358 1616 aaKnown RBP19.2■□□□□ 0.66
RTN3-205ENST00000356000 PRPF40AO75400 957 aaKnown RBP19.2■□□□□ 0.66
RTN3-205ENST00000356000 FEZ2Q9UHY8 353 aaPredicted RBP19.2■□□□□ 0.66
RTN3-205ENST00000356000 ABCC5O15440 1437 aa19.2■□□□□ 0.66
RTN3-205ENST00000356000 CEBPAP49715 358 aaPredicted RBP19.2■□□□□ 0.66
RTN3-205ENST00000356000 EIF2AK4Q9P2K8 1649 aaKnown RBP19.19■□□□□ 0.66
RTN3-205ENST00000356000 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
RTN3-205ENST00000356000 CCDC146Q8IYE0 955 aa19.19■□□□□ 0.66
RTN3-205ENST00000356000 HDAC5Q9UQL6 1122 aa19.19■□□□□ 0.66
RTN3-205ENST00000356000 CLGNO14967 610 aa19.18■□□□□ 0.66
RTN3-205ENST00000356000 RARSP54136 660 aaKnown RBP19.18■□□□□ 0.66
RTN3-205ENST00000356000 TTC12Q9H892 705 aaPredicted RBP19.18■□□□□ 0.66
RTN3-205ENST00000356000 CPS1P31327 1500 aa19.18■□□□□ 0.66
RTN3-205ENST00000356000 CREBRFQ8IUR6 639 aa19.17■□□□□ 0.66
RTN3-205ENST00000356000 TSPY26PQ9H489 355 aa19.17■□□□□ 0.66
RTN3-205ENST00000356000 SLC52A1Q9NWF4 448 aa19.17■□□□□ 0.66
RTN3-205ENST00000356000 TNNQ9UQP3 1299 aa19.17■□□□□ 0.66
RTN3-205ENST00000356000 DISP3Q9P2K9 1392 aa19.17■□□□□ 0.66
RTN3-205ENST00000356000 KDM2AQ9Y2K7 1162 aa19.16■□□□□ 0.66
RTN3-205ENST00000356000 RNF17Q9BXT8 1623 aaKnown RBP19.15■□□□□ 0.66
RTN3-205ENST00000356000 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
RTN3-205ENST00000356000 UVSSAQ2YD98 709 aa19.15■□□□□ 0.66
RTN3-205ENST00000356000 CDCA8Q53HL2 280 aa19.15■□□□□ 0.66
RTN3-205ENST00000356000 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
RTN3-205ENST00000356000 BCCIPQ9P287 314 aaKnown RBP eCLIP19.15■□□□□ 0.66
RTN3-205ENST00000356000 HDAC1Q13547 482 aaPredicted RBP19.15■□□□□ 0.66
RTN3-205ENST00000356000 KRT222Q8N1A0 295 aa19.15■□□□□ 0.66
RTN3-205ENST00000356000 KIF18AQ8NI77 898 aa19.14■□□□□ 0.65
RTN3-205ENST00000356000 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
RTN3-205ENST00000356000 DEPDC5O75140 1603 aa19.14■□□□□ 0.65
RTN3-205ENST00000356000 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
RTN3-205ENST00000356000 NSFL1CQ9UNZ2 370 aaKnown RBP19.14■□□□□ 0.65
RTN3-205ENST00000356000 MBD3O95983 291 aa19.13■□□□□ 0.65
RTN3-205ENST00000356000 MPNDQ8N594 471 aa19.13■□□□□ 0.65
RTN3-205ENST00000356000 KIAA1524Q8TCG1 905 aa19.13■□□□□ 0.65
RTN3-205ENST00000356000 TESK2Q96S53 571 aa19.13■□□□□ 0.65
RTN3-205ENST00000356000 HNRNPMP52272 730 aaKnown RBP eCLIP19.12■□□□□ 0.65
RTN3-205ENST00000356000 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
RTN3-205ENST00000356000 TRPM1Q7Z4N2 1603 aa19.12■□□□□ 0.65
RTN3-205ENST00000356000 ERICH4A6NGS2 130 aa19.12■□□□□ 0.65
RTN3-205ENST00000356000 ZNF777Q9ULD5 760 aaPredicted RBP19.12■□□□□ 0.65
RTN3-205ENST00000356000 SPATA31D1Q6ZQQ2 1576 aa19.12■□□□□ 0.65
RTN3-205ENST00000356000 FAM53CQ9NYF3 392 aa19.11■□□□□ 0.65
RTN3-205ENST00000356000 PKP1Q13835 747 aa19.11■□□□□ 0.65
RTN3-205ENST00000356000 AXDND1Q5T1B0 1012 aaPredicted RBP19.11■□□□□ 0.65
RTN3-205ENST00000356000 CHMP4CQ96CF2 233 aa19.11■□□□□ 0.65
RTN3-205ENST00000356000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.1■□□□□ 0.65
RTN3-205ENST00000356000 FAM184AQ8NB25 1140 aa19.1■□□□□ 0.65
RTN3-205ENST00000356000 CWC22Q9HCG8 908 aaKnown RBP19.1■□□□□ 0.65
RTN3-205ENST00000356000 ERBINQ96RT1 1412 aa19.08■□□□□ 0.65
RTN3-205ENST00000356000 GPRASP1Q5JY77 1395 aa19.08■□□□□ 0.64
RTN3-205ENST00000356000 MED14O60244 1454 aa19.07■□□□□ 0.64
RTN3-205ENST00000356000 ADCY5O95622 1261 aa19.07■□□□□ 0.64
RTN3-205ENST00000356000 TNRQ92752 1358 aa19.07■□□□□ 0.64
RTN3-205ENST00000356000 NOP2P46087 812 aaKnown RBP19.07■□□□□ 0.64
RTN3-205ENST00000356000 HNRNPH2P55795 449 aaKnown RBP19.07■□□□□ 0.64
RTN3-205ENST00000356000 BMP2KLQ5H9B9 411 aa19.07■□□□□ 0.64
RTN3-205ENST00000356000 WWC1Q8IX03 1113 aa19.07■□□□□ 0.64
RTN3-205ENST00000356000 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
RTN3-205ENST00000356000 CYP2C19P33261 490 aa19.06■□□□□ 0.64
RTN3-205ENST00000356000 RAD51AP2Q09MP3 1159 aa19.06■□□□□ 0.64
RTN3-205ENST00000356000 TRERF1Q96PN7 1200 aa19.06■□□□□ 0.64
RTN3-205ENST00000356000 KCNG1Q9UIX4 513 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms