RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 VPS37CA5D8V6 355 aaPredicted RBP18.62■□□□□ 0.57
STRN3-201ENST00000355683 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
STRN3-201ENST00000355683 ADGRL2O95490 1459 aa18.62■□□□□ 0.57
STRN3-201ENST00000355683 CDC45O75419 566 aa18.62■□□□□ 0.57
STRN3-201ENST00000355683 TNRQ92752 1358 aa18.61■□□□□ 0.57
STRN3-201ENST00000355683 MAGI2Q86UL8 1455 aa18.61■□□□□ 0.57
STRN3-201ENST00000355683 TULP1O00294 542 aaPredicted RBP18.61■□□□□ 0.57
STRN3-201ENST00000355683 HSPA2P54652 639 aa18.6■□□□□ 0.57
STRN3-201ENST00000355683 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
STRN3-201ENST00000355683 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
STRN3-201ENST00000355683 TBC1D9Q6ZT07 1266 aa18.59■□□□□ 0.57
STRN3-201ENST00000355683 TBC1D32Q96NH3 1257 aa18.59■□□□□ 0.57
STRN3-201ENST00000355683 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
STRN3-201ENST00000355683 PSME1Q06323 249 aa18.59■□□□□ 0.57
STRN3-201ENST00000355683 PROSER2Q86WR7 435 aaPredicted RBP18.59■□□□□ 0.57
STRN3-201ENST00000355683 MEIS3Q99687 375 aa18.59■□□□□ 0.57
STRN3-201ENST00000355683 TNPO1Q92973 898 aaKnown RBP18.58■□□□□ 0.57
STRN3-201ENST00000355683 HSP90B1P14625 803 aaKnown RBP18.58■□□□□ 0.57
STRN3-201ENST00000355683 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.57
STRN3-201ENST00000355683 ZFYVE16Q7Z3T8 1539 aa18.57■□□□□ 0.56
STRN3-201ENST00000355683 NASPP49321 788 aaPredicted RBP18.57■□□□□ 0.56
STRN3-201ENST00000355683 INTS3Q68E01 1043 aaKnown RBP18.57■□□□□ 0.56
STRN3-201ENST00000355683 ARHGEF5Q12774 1597 aa18.57■□□□□ 0.56
STRN3-201ENST00000355683 FCHSD2O94868 740 aa18.57■□□□□ 0.56
STRN3-201ENST00000355683 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
STRN3-201ENST00000355683 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
STRN3-201ENST00000355683 CCDC85AQ96PX6 553 aaPredicted RBP18.56■□□□□ 0.56
STRN3-201ENST00000355683 FIBPO43427 364 aa18.56■□□□□ 0.56
STRN3-201ENST00000355683 UBTFL1P0CB47 393 aaPredicted RBP18.55■□□□□ 0.56
STRN3-201ENST00000355683 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
STRN3-201ENST00000355683 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
STRN3-201ENST00000355683 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
STRN3-201ENST00000355683 FAM43AQ8N2R8 423 aa18.55■□□□□ 0.56
STRN3-201ENST00000355683 CCDC61Q9Y6R9 512 aa18.55■□□□□ 0.56
STRN3-201ENST00000355683 CEBPZQ03701 1054 aaKnown RBP18.55■□□□□ 0.56
STRN3-201ENST00000355683 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
STRN3-201ENST00000355683 HDGFL1Q5TGJ6 251 aa18.55■□□□□ 0.56
STRN3-201ENST00000355683 STK3Q13188 491 aa18.55■□□□□ 0.56
STRN3-201ENST00000355683 GRPEL1Q9HAV7 217 aa18.55■□□□□ 0.56
STRN3-201ENST00000355683 DIAPH3Q9NSV4 1193 aa18.54■□□□□ 0.56
STRN3-201ENST00000355683 R3HCC1Q9Y3T6 440 aaKnown RBP18.54■□□□□ 0.56
STRN3-201ENST00000355683 MYL6BP14649 208 aa18.54■□□□□ 0.56
STRN3-201ENST00000355683 BCORL1Q5H9F3 1711 aa18.54■□□□□ 0.56
STRN3-201ENST00000355683 K7ELQ4 463 aaPredicted RBP18.54■□□□□ 0.56
STRN3-201ENST00000355683 REC8O95072 547 aa18.54■□□□□ 0.56
STRN3-201ENST00000355683 ZC3H6P61129 1189 aaKnown RBP18.53■□□□□ 0.56
STRN3-201ENST00000355683 CWC27Q6UX04 472 aaKnown RBP18.53■□□□□ 0.56
STRN3-201ENST00000355683 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
STRN3-201ENST00000355683 MLH3Q9UHC1 1453 aa18.53■□□□□ 0.56
STRN3-201ENST00000355683 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
STRN3-201ENST00000355683 XRCC6P12956 609 aaKnown RBP eCLIP18.52■□□□□ 0.568e-6■■□□□ 13.6
STRN3-201ENST00000355683 FERMT3Q86UX7 667 aa18.52■□□□□ 0.56
STRN3-201ENST00000355683 NLRP2Q9NX02 1062 aa18.52■□□□□ 0.56
STRN3-201ENST00000355683 CDC42BPBQ9Y5S2 1711 aa18.51■□□□□ 0.55
STRN3-201ENST00000355683 COL17A1Q9UMD9 1497 aaPredicted RBP18.51■□□□□ 0.55
STRN3-201ENST00000355683 TCEANC2Q96MN5 208 aa18.51■□□□□ 0.55
STRN3-201ENST00000355683 ZMYND15Q9H091 742 aa18.51■□□□□ 0.55
STRN3-201ENST00000355683 RRAGDQ9NQL2 400 aaPredicted RBP18.51■□□□□ 0.55
STRN3-201ENST00000355683 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
STRN3-201ENST00000355683 ABCA9Q8IUA7 1624 aa18.5■□□□□ 0.55
STRN3-201ENST00000355683 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
STRN3-201ENST00000355683 SRGAP3O43295 1099 aa18.5■□□□□ 0.55
STRN3-201ENST00000355683 ATF3P18847 181 aa18.5■□□□□ 0.55
STRN3-201ENST00000355683 GAS2L2Q8NHY3 880 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 PLA2R1Q13018 1463 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 SYCE3A1L190 88 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 IFIT2P09913 472 aaKnown RBP18.49■□□□□ 0.55
STRN3-201ENST00000355683 GORABQ5T7V8 394 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 ZGPATQ8N5A5 531 aaKnown RBP18.49■□□□□ 0.55
STRN3-201ENST00000355683 CHMP4CQ96CF2 233 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 A0A1W2PP64 1363 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 MRE11P49959 708 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 MPRIPQ6WCQ1 1025 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 G2E3Q7L622 706 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
STRN3-201ENST00000355683 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
STRN3-201ENST00000355683 GCC1Q96CN9 775 aa18.48■□□□□ 0.55
STRN3-201ENST00000355683 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
STRN3-201ENST00000355683 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
STRN3-201ENST00000355683 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
STRN3-201ENST00000355683 LRRFIP2Q9Y608 721 aaKnown RBP18.47■□□□□ 0.55
STRN3-201ENST00000355683 VAMP4O75379 141 aa18.47■□□□□ 0.55
STRN3-201ENST00000355683 GNAI2P04899 355 aa18.46■□□□□ 0.55
STRN3-201ENST00000355683 SPC24Q8NBT2 197 aa18.46■□□□□ 0.55
STRN3-201ENST00000355683 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
STRN3-201ENST00000355683 WASLO00401 505 aaPredicted RBP18.46■□□□□ 0.55
STRN3-201ENST00000355683 CDK11BP21127 795 aaKnown RBP18.46■□□□□ 0.55
STRN3-201ENST00000355683 NPATQ14207 1427 aa18.46■□□□□ 0.55
STRN3-201ENST00000355683 TOMM22Q9NS69 142 aa18.46■□□□□ 0.55
STRN3-201ENST00000355683 ZBTB40Q9NUA8 1239 aa18.45■□□□□ 0.54
STRN3-201ENST00000355683 DNAJC2Q99543 621 aaKnown RBP18.45■□□□□ 0.54
STRN3-201ENST00000355683 HECW2Q9P2P5 1572 aa18.44■□□□□ 0.54
STRN3-201ENST00000355683 CPA1P15085 419 aa18.44■□□□□ 0.54
STRN3-201ENST00000355683 SDSP20132 328 aa18.44■□□□□ 0.54
STRN3-201ENST00000355683 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
STRN3-201ENST00000355683 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
STRN3-201ENST00000355683 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
STRN3-201ENST00000355683 CREBRFQ8IUR6 639 aa18.43■□□□□ 0.54
STRN3-201ENST00000355683 ARAP3Q8WWN8 1544 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms