RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 SOGA1O94964 1423 aa6.82□□□□□ -1.32
SRGAP1-201ENST00000355086 PLEKHO1Q53GL0 409 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 PANK1Q8TE04 598 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 EPB41L2O43491 1005 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 ABTB2Q8N961 1025 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 MAP2K1Q02750 393 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 CEP57L1Q8IYX8 460 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 CCDC57Q2TAC2 916 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 SPDYE4A6NLX3 237 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 PRKRIP1Q9H875 184 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 TDO2P48775 406 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 GRIPAP1Q4V328 841 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 CETN2P41208 172 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 CDKL5O76039 1030 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 KRT85P78386 507 aa6.81□□□□□ -1.32
SRGAP1-201ENST00000355086 CYP46A1Q9Y6A2 500 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 FKBP4Q02790 459 aaKnown RBP eCLIP6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 PIBF1Q8WXW3 757 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 UBAC1Q9BSL1 405 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 CCDC113Q9H0I3 377 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 ZSCAN25Q6NSZ9 544 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 PDS5BQ9NTI5 1447 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 CHMP4BP1P59074 171 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 GGNBP2Q9H3C7 697 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 CYB5RLQ6IPT4 315 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 GPRASP1Q5JY77 1395 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 JPH4Q96JJ6 628 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 CABP2Q9NPB3 220 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 NFKBIBQ15653 356 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 USP5P45974 858 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 PPM1EQ8WY54 764 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 SIL1Q9H173 461 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 DHX57Q6P158 1386 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 FANCIQ9NVI1 1328 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 SMG6Q86US8 1419 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 GIMAP7Q8NHV1 300 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 PPP4R3AQ6IN85 833 aa6.8□□□□□ -1.32
SRGAP1-201ENST00000355086 SCLT1Q96NL6 688 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 TDRD9Q8NDG6 1382 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 CEP63Q96MT8 703 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 PPP1R12BO60237 982 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 CCDC148Q8NFR7 591 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 CCDC102AQ96A19 550 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 RBM10P98175 930 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 CABP4P57796 275 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 TNIP1Q15025 636 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 HOOK3Q86VS8 718 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 CEP131Q9UPN4 1083 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 EIF5P55010 431 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 COMMD10Q9Y6G5 202 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 GSTTP1A0A1W2PQM5 241 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 TATP17735 454 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 ESCO1Q5FWF5 840 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 CFAP45Q9UL16 551 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 PSMD1Q99460 953 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 WDR33Q9C0J8 1336 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 TMOD2Q9NZR1 351 aa6.79□□□□□ -1.32
SRGAP1-201ENST00000355086 WDHD1O75717 1129 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 DRC1Q96MC2 740 aa6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 C1orf115Q9H7X2 142 aa6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 FEZ1Q99689 392 aa6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 MAP4K4O95819 1239 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 HDGFL1Q5TGJ6 251 aa6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 SMTNL1A8MU46 457 aa6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 IMMTQ16891 758 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 GOPCQ9HD26 462 aa6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 SEC63Q9UGP8 760 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-201ENST00000355086 MYL6BP14649 208 aa6.77□□□□□ -1.32
SRGAP1-201ENST00000355086 RAI14Q9P0K7 980 aa6.77□□□□□ -1.32
SRGAP1-201ENST00000355086 LARP1BQ659C4 914 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 CRACR2AQ9BSW2 395 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 CCDC150Q8NCX0 1101 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 SPATA32Q96LK8 384 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 WASF1Q92558 559 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 BCCIPQ9P287 314 aaKnown RBP eCLIP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 IFFO1Q0D2I5 559 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 MPNDQ8N594 471 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 NOB1Q9ULX3 412 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 MYCNP04198 464 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 DDX54Q8TDD1 881 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 UPF3BQ9BZI7 483 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 GCC1Q96CN9 775 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 BLOC1S2Q6QNY1 142 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 FHOD3Q2V2M9 1422 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 CTNNBL1Q8WYA6 563 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 LRP2BPQ9P2M1 347 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 NUTM2BA6NNL0 878 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 NUTM2EB1AL46 878 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 ARHGAP29Q52LW3 1261 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 TOM1L2Q6ZVM7 507 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 NUTM2AQ8IVF1 878 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 SPINK5Q9NQ38 1064 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 FILIP1Q7Z7B0 1213 aa6.77□□□□□ -1.33
SRGAP1-201ENST00000355086 DDX23Q9BUQ8 820 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 HOMER2Q9NSB8 354 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 UBE4AQ14139 1066 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 ZNF287Q9HBT7 754 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 MAP9Q49MG5 647 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms