RNA–Protein interactions for RNA: ENST00000351137.8

CKLF-203, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-203ENST00000351137 NUTM2GQ5VZR2 741 aa22.85■■□□□ 1.25
CKLF-203ENST00000351137 ABTB2Q8N961 1025 aa22.85■■□□□ 1.25
CKLF-203ENST00000351137 BRD4O60885 1362 aaPredicted RBP22.85■■□□□ 1.25
CKLF-203ENST00000351137 AKAP12Q02952 1782 aa22.84■■□□□ 1.25
CKLF-203ENST00000351137 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
CKLF-203ENST00000351137 WNK3Q9BYP7 1800 aa22.84■■□□□ 1.25
CKLF-203ENST00000351137 ACEP12821 1306 aa22.83■■□□□ 1.25
CKLF-203ENST00000351137 STAC3Q96MF2 364 aa22.83■■□□□ 1.25
CKLF-203ENST00000351137 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
CKLF-203ENST00000351137 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.25
CKLF-203ENST00000351137 PTF1AQ7RTS3 328 aa22.82■■□□□ 1.24
CKLF-203ENST00000351137 MARCH10Q8NA82 808 aaPredicted RBP22.81■■□□□ 1.24
CKLF-203ENST00000351137 ARHGEF28Q8N1W1 1705 aaKnown RBP22.8■■□□□ 1.24
CKLF-203ENST00000351137 SHANK3Q9BYB0 1731 aa22.79■■□□□ 1.24
CKLF-203ENST00000351137 GPR162Q16538 588 aa22.79■■□□□ 1.24
CKLF-203ENST00000351137 PPARGC1BQ86YN6 1023 aaKnown RBP22.78■■□□□ 1.24
CKLF-203ENST00000351137 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
CKLF-203ENST00000351137 CDK19Q9BWU1 502 aa22.76■■□□□ 1.23
CKLF-203ENST00000351137 COL24A1Q17RW2 1714 aa22.76■■□□□ 1.23
CKLF-203ENST00000351137 WDR17Q8IZU2 1322 aa22.76■■□□□ 1.23
CKLF-203ENST00000351137 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
CKLF-203ENST00000351137 COL18A1P39060 1754 aa22.75■■□□□ 1.23
CKLF-203ENST00000351137 SLIT3O75094 1523 aa22.74■■□□□ 1.23
CKLF-203ENST00000351137 SLC16A10Q8TF71 515 aa22.74■■□□□ 1.23
CKLF-203ENST00000351137 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
CKLF-203ENST00000351137 QSER1Q2KHR3 1735 aa22.71■■□□□ 1.23
CKLF-203ENST00000351137 CARD10Q9BWT7 1032 aa22.7■■□□□ 1.22
CKLF-203ENST00000351137 GRIN3BO60391 1043 aa22.69■■□□□ 1.22
CKLF-203ENST00000351137 EXOC5O00471 708 aa22.68■■□□□ 1.22
CKLF-203ENST00000351137 TNS2Q63HR2 1409 aa22.66■■□□□ 1.22
CKLF-203ENST00000351137 POLD1P28340 1107 aa22.66■■□□□ 1.22
CKLF-203ENST00000351137 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
CKLF-203ENST00000351137 HSPA6P17066 643 aa22.65■■□□□ 1.22
CKLF-203ENST00000351137 TRPM1Q7Z4N2 1603 aa22.64■■□□□ 1.22
CKLF-203ENST00000351137 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
CKLF-203ENST00000351137 NLRP6P59044 892 aa22.63■■□□□ 1.21
CKLF-203ENST00000351137 AXIN2Q9Y2T1 843 aa22.63■■□□□ 1.21
CKLF-203ENST00000351137 PPIP5K1Q6PFW1 1433 aa22.63■■□□□ 1.21
CKLF-203ENST00000351137 DCAF11Q8TEB1 546 aa22.62■■□□□ 1.21
CKLF-203ENST00000351137 USP6P35125 1406 aa22.62■■□□□ 1.21
CKLF-203ENST00000351137 ABCC6O95255 1503 aa22.62■■□□□ 1.21
CKLF-203ENST00000351137 ZNF827Q17R98 1081 aa22.61■■□□□ 1.21
CKLF-203ENST00000351137 ARHGEF25Q86VW2 580 aa22.6■■□□□ 1.21
CKLF-203ENST00000351137 BTAF1O14981 1849 aa22.59■■□□□ 1.21
CKLF-203ENST00000351137 ATP10DQ9P241 1426 aa22.59■■□□□ 1.21
CKLF-203ENST00000351137 AKT1S1Q96B36 256 aa22.59■■□□□ 1.21
CKLF-203ENST00000351137 KDM2AQ9Y2K7 1162 aa22.59■■□□□ 1.21
CKLF-203ENST00000351137 ZBTB7CA1YPR0 619 aa22.58■■□□□ 1.21
CKLF-203ENST00000351137 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
CKLF-203ENST00000351137 KCNH5Q8NCM2 988 aa22.58■■□□□ 1.21
CKLF-203ENST00000351137 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
CKLF-203ENST00000351137 RGPD5Q99666 1765 aa22.57■■□□□ 1.2
CKLF-203ENST00000351137 KIAA1210Q9ULL0 1709 aa22.57■■□□□ 1.2
CKLF-203ENST00000351137 PIK3C2AO00443 1686 aa22.56■■□□□ 1.2
CKLF-203ENST00000351137 ADCY9O60503 1353 aa22.55■■□□□ 1.2
CKLF-203ENST00000351137 NLGN2Q8NFZ4 835 aa22.55■■□□□ 1.2
CKLF-203ENST00000351137 GPBP1L1Q9HC44 474 aaPredicted RBP22.55■■□□□ 1.2
CKLF-203ENST00000351137 LRRC4BQ9NT99 713 aa22.55■■□□□ 1.2
CKLF-203ENST00000351137 KAT6BQ8WYB5 2073 aa22.54■■□□□ 1.2
CKLF-203ENST00000351137 CSB-PGBD3P0DP91 1061 aa22.54■■□□□ 1.2
CKLF-203ENST00000351137 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.21e-7■■■■□ 20.5
CKLF-203ENST00000351137 QRICH2Q9H0J4 1663 aa22.53■■□□□ 1.2
CKLF-203ENST00000351137 KLHL34Q8N239 644 aa22.53■■□□□ 1.2
CKLF-203ENST00000351137 PNPLA7Q6ZV29 1317 aa22.53■■□□□ 1.2
CKLF-203ENST00000351137 SRPK2P78362 688 aaKnown RBP22.52■■□□□ 1.2
CKLF-203ENST00000351137 ACSBG1Q96GR2 724 aa22.5■■□□□ 1.19
CKLF-203ENST00000351137 TUBGCP6Q96RT7 1819 aa22.49■■□□□ 1.19
CKLF-203ENST00000351137 NFAT5O94916 1531 aa22.47■■□□□ 1.19
CKLF-203ENST00000351137 CABP1Q9NZU7 370 aa22.47■■□□□ 1.19
CKLF-203ENST00000351137 ZNF692Q9BU19 519 aaPredicted RBP22.46■■□□□ 1.19
CKLF-203ENST00000351137 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
CKLF-203ENST00000351137 TFCP2L1Q9NZI6 479 aa22.46■■□□□ 1.19
CKLF-203ENST00000351137 IL2RBP14784 551 aa22.45■■□□□ 1.18
CKLF-203ENST00000351137 TTC21AQ8NDW8 1320 aa22.45■■□□□ 1.18
CKLF-203ENST00000351137 CENPJQ9HC77 1338 aaPredicted RBP22.45■■□□□ 1.18
CKLF-203ENST00000351137 ERBB3P21860 1342 aa22.43■■□□□ 1.18
CKLF-203ENST00000351137 APLP1P51693 650 aa22.43■■□□□ 1.18
CKLF-203ENST00000351137 CD2APQ9Y5K6 639 aa22.43■■□□□ 1.18
CKLF-203ENST00000351137 TTC21BQ7Z4L5 1316 aa22.42■■□□□ 1.18
CKLF-203ENST00000351137 LY75O60449 1722 aa22.42■■□□□ 1.18
CKLF-203ENST00000351137 HMGB2P26583 209 aaKnown RBP22.39■■□□□ 1.17
CKLF-203ENST00000351137 DNAJC5GQ8N7S2 189 aa22.38■■□□□ 1.17
CKLF-203ENST00000351137 KIF3CO14782 793 aa22.37■■□□□ 1.17
CKLF-203ENST00000351137 USP54Q70EL1 1684 aa22.36■■□□□ 1.17
CKLF-203ENST00000351137 NLRP2Q9NX02 1062 aa22.36■■□□□ 1.17
CKLF-203ENST00000351137 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
CKLF-203ENST00000351137 ANKRD36BQ8N2N9 1353 aa22.34■■□□□ 1.17
CKLF-203ENST00000351137 RAB3GAP2Q9H2M9 1393 aa22.34■■□□□ 1.17
CKLF-203ENST00000351137 EVC2Q86UK5 1308 aa22.32■■□□□ 1.16
CKLF-203ENST00000351137 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
CKLF-203ENST00000351137 COL23A1Q86Y22 540 aaPredicted RBP22.32■■□□□ 1.16
CKLF-203ENST00000351137 SOX12O15370 315 aa22.31■■□□□ 1.16
CKLF-203ENST00000351137 FLAD1Q8NFF5 587 aa22.31■■□□□ 1.16
CKLF-203ENST00000351137 ZNF526Q8TF50 670 aaPredicted RBP22.31■■□□□ 1.16
CKLF-203ENST00000351137 NSD2O96028 1365 aa22.29■■□□□ 1.16
CKLF-203ENST00000351137 TOMM70O94826 608 aa22.29■■□□□ 1.16
CKLF-203ENST00000351137 LTN1O94822 1766 aa22.29■■□□□ 1.16
CKLF-203ENST00000351137 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
CKLF-203ENST00000351137 FAM208AQ9UK61 1670 aaKnown RBP22.28■■□□□ 1.16
CKLF-203ENST00000351137 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms