RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 C1orf167Q5SNV9 1468 aa32.83■■■□□ 2.85
TRADD-201ENST00000345057 NFE2L2Q16236 605 aa32.83■■■□□ 2.85
TRADD-201ENST00000345057 STRCP1A6NGW2 1772 aa32.83■■■□□ 2.85
TRADD-201ENST00000345057 AMPHP49418 695 aa32.82■■■□□ 2.85
TRADD-201ENST00000345057 SOX12O15370 315 aa32.82■■■□□ 2.84
TRADD-201ENST00000345057 CALD1Q05682 793 aaKnown RBP32.81■■■□□ 2.84
TRADD-201ENST00000345057 LMOD3Q0VAK6 560 aa32.8■■■□□ 2.84
TRADD-201ENST00000345057 HSP90AB2PQ58FF8 381 aa32.8■■■□□ 2.84
TRADD-201ENST00000345057 CT47B1P0C2W7 299 aaPredicted RBP32.8■■■□□ 2.84
TRADD-201ENST00000345057 ORAI2Q96SN7 254 aa32.8■■■□□ 2.84
TRADD-201ENST00000345057 RGPD1P0DJD0 1748 aa32.79■■■□□ 2.84
TRADD-201ENST00000345057 RTL1A6NKG5 1358 aa32.79■■■□□ 2.84
TRADD-201ENST00000345057 ARHGEF10O15013 1369 aa32.79■■■□□ 2.84
TRADD-201ENST00000345057 CADPS2Q86UW7 1296 aa32.78■■■□□ 2.84
TRADD-201ENST00000345057 KCNH5Q8NCM2 988 aa32.78■■■□□ 2.84
TRADD-201ENST00000345057 MST1RQ04912 1400 aa32.75■■■□□ 2.83
TRADD-201ENST00000345057 NUTM2GQ5VZR2 741 aa32.75■■■□□ 2.83
TRADD-201ENST00000345057 PHACTR3Q96KR7 559 aa32.75■■■□□ 2.83
TRADD-201ENST00000345057 MSH6P52701 1360 aa32.74■■■□□ 2.83
TRADD-201ENST00000345057 CCDC136Q96JN2 1154 aa32.74■■■□□ 2.83
TRADD-201ENST00000345057 FOXO3O43524 673 aa32.74■■■□□ 2.83
TRADD-201ENST00000345057 SULT6B1Q6IMI4 303 aa32.74■■■□□ 2.83
TRADD-201ENST00000345057 PLIN1O60240 522 aa32.73■■■□□ 2.83
TRADD-201ENST00000345057 B4GALNT3Q6L9W6 998 aa32.73■■■□□ 2.83
TRADD-201ENST00000345057 FANCIQ9NVI1 1328 aa32.71■■■□□ 2.83
TRADD-201ENST00000345057 EXOC6Q8TAG9 804 aa32.71■■■□□ 2.83
TRADD-201ENST00000345057 HOXC9P31274 260 aa32.7■■■□□ 2.83
TRADD-201ENST00000345057 NFAT5O94916 1531 aa32.69■■■□□ 2.82
TRADD-201ENST00000345057 TRPM3Q9HCF6 1732 aaPredicted RBP32.69■■■□□ 2.82
TRADD-201ENST00000345057 KRT28Q7Z3Y7 464 aa32.69■■■□□ 2.82
TRADD-201ENST00000345057 KDRP35968 1356 aa32.67■■■□□ 2.82
TRADD-201ENST00000345057 IGSF1Q8N6C5 1336 aa32.66■■■□□ 2.82
TRADD-201ENST00000345057 PHRF1Q9P1Y6 1649 aaKnown RBP32.66■■■□□ 2.82
TRADD-201ENST00000345057 SLIT3O75094 1523 aa32.66■■■□□ 2.82
TRADD-201ENST00000345057 RARSP54136 660 aaKnown RBP32.65■■■□□ 2.82
TRADD-201ENST00000345057 LTN1O94822 1766 aa32.65■■■□□ 2.82
TRADD-201ENST00000345057 AEBP1Q8IUX7 1158 aa32.65■■■□□ 2.82
TRADD-201ENST00000345057 BCAR3O75815 825 aa32.64■■■□□ 2.82
TRADD-201ENST00000345057 GNAI1P63096 354 aa32.63■■■□□ 2.81
TRADD-201ENST00000345057 IP6K1Q92551 441 aa32.63■■■□□ 2.81
TRADD-201ENST00000345057 CRBNQ96SW2 442 aa32.63■■■□□ 2.81
TRADD-201ENST00000345057 IFT57Q9NWB7 429 aa32.63■■■□□ 2.81
TRADD-201ENST00000345057 PDE3AQ14432 1141 aa32.61■■■□□ 2.81
TRADD-201ENST00000345057 TSR2Q969E8 191 aaKnown RBP32.61■■■□□ 2.81
TRADD-201ENST00000345057 DLG5Q8TDM6 1919 aa32.61■■■□□ 2.81
TRADD-201ENST00000345057 NPHP3Q7Z494 1330 aa32.61■■■□□ 2.81
TRADD-201ENST00000345057 EYA1Q99502 592 aa32.61■■■□□ 2.81
TRADD-201ENST00000345057 USP19O94966 1318 aa32.61■■■□□ 2.81
TRADD-201ENST00000345057 CANXP27824 592 aaKnown RBP32.6■■■□□ 2.81
TRADD-201ENST00000345057 XPCQ01831 940 aaPredicted RBP32.59■■■□□ 2.81
TRADD-201ENST00000345057 EXOSC9Q06265 439 aaKnown RBP32.59■■■□□ 2.81
TRADD-201ENST00000345057 XIRP1Q702N8 1843 aaKnown RBP32.58■■■□□ 2.81
TRADD-201ENST00000345057 ZNF428Q96B54 188 aa32.58■■■□□ 2.81
TRADD-201ENST00000345057 GCP02774 474 aa32.57■■■□□ 2.8
TRADD-201ENST00000345057 ALS2Q96Q42 1657 aa32.57■■■□□ 2.8
TRADD-201ENST00000345057 ZNF335Q9H4Z2 1342 aaPredicted RBP32.57■■■□□ 2.8
TRADD-201ENST00000345057 C20orf194Q5TEA3 1177 aa32.57■■■□□ 2.8
TRADD-201ENST00000345057 LMOD2Q6P5Q4 547 aa32.56■■■□□ 2.8
TRADD-201ENST00000345057 GAS2L2Q8NHY3 880 aa32.54■■■□□ 2.8
TRADD-201ENST00000345057 CFAP44Q96MT7 982 aa32.54■■■□□ 2.8
TRADD-201ENST00000345057 ZNF853P0CG23 659 aa32.53■■■□□ 2.8
TRADD-201ENST00000345057 ARHGEF25Q86VW2 580 aa32.52■■■□□ 2.8
TRADD-201ENST00000345057 MS4A1P11836 297 aa32.51■■■□□ 2.79
TRADD-201ENST00000345057 LAS1LQ9Y4W2 734 aaKnown RBP32.5■■■□□ 2.79
TRADD-201ENST00000345057 ALDH1L2Q3SY69 923 aa32.48■■■□□ 2.79
TRADD-201ENST00000345057 FRAT1Q92837 279 aaPredicted RBP32.48■■■□□ 2.79
TRADD-201ENST00000345057 HTATSF1O43719 755 aaKnown RBP32.48■■■□□ 2.79
TRADD-201ENST00000345057 THUMPD2Q9BTF0 503 aaKnown RBP32.48■■■□□ 2.79
TRADD-201ENST00000345057 TNS3Q68CZ2 1445 aa32.47■■■□□ 2.79
TRADD-201ENST00000345057 AAMPQ13685 434 aa32.47■■■□□ 2.79
TRADD-201ENST00000345057 RTF1Q92541 710 aaKnown RBP32.47■■■□□ 2.79
TRADD-201ENST00000345057 LTV1Q96GA3 475 aaPredicted RBP32.47■■■□□ 2.79
TRADD-201ENST00000345057 SMC4Q9NTJ3 1288 aa32.46■■■□□ 2.79
TRADD-201ENST00000345057 PXDNQ92626 1479 aa32.45■■■□□ 2.79
TRADD-201ENST00000345057 MTHFSDQ2M296 383 aaKnown RBP32.45■■■□□ 2.79
TRADD-201ENST00000345057 FAM83GA6ND36 823 aa32.44■■■□□ 2.78
TRADD-201ENST00000345057 MBIPQ9NS73 344 aa32.44■■■□□ 2.78
TRADD-201ENST00000345057 HAP1P54257 671 aaPredicted RBP32.44■■■□□ 2.78
TRADD-201ENST00000345057 ZKSCAN2Q63HK3 967 aa32.43■■■□□ 2.78
TRADD-201ENST00000345057 KIF16BQ96L93 1317 aa32.43■■■□□ 2.78
TRADD-201ENST00000345057 ZBTB7CA1YPR0 619 aa32.42■■■□□ 2.78
TRADD-201ENST00000345057 BRINP3Q76B58 766 aa32.41■■■□□ 2.78
TRADD-201ENST00000345057 BCL2L13Q9BXK5 485 aa32.41■■■□□ 2.78
TRADD-201ENST00000345057 LTBP4Q8N2S1 1624 aa32.41■■■□□ 2.78
TRADD-201ENST00000345057 MED1Q15648 1581 aaPredicted RBP32.41■■■□□ 2.78
TRADD-201ENST00000345057 SSH1Q8WYL5 1049 aa32.4■■■□□ 2.78
TRADD-201ENST00000345057 SPATA31A3Q5VYP0 1347 aa32.4■■■□□ 2.78
TRADD-201ENST00000345057 BRPF1P55201 1214 aaPredicted RBP32.4■■■□□ 2.78
TRADD-201ENST00000345057 DCTN1Q14203 1278 aa32.4■■■□□ 2.78
TRADD-201ENST00000345057 SLAIN2Q9P270 581 aa32.4■■■□□ 2.78
TRADD-201ENST00000345057 IPO8O15397 1037 aaKnown RBP32.39■■■□□ 2.78
TRADD-201ENST00000345057 TSHZ2Q9NRE2 1034 aa32.37■■■□□ 2.77
TRADD-201ENST00000345057 ABCC6O95255 1503 aa32.37■■■□□ 2.77
TRADD-201ENST00000345057 CHL1O00533 1208 aa32.37■■■□□ 2.77
TRADD-201ENST00000345057 GNAT3A8MTJ3 354 aa32.36■■■□□ 2.77
TRADD-201ENST00000345057 MCM10Q7L590 875 aa32.36■■■□□ 2.77
TRADD-201ENST00000345057 CRB1P82279 1406 aa32.36■■■□□ 2.77
TRADD-201ENST00000345057 NCAPD2Q15021 1401 aa32.36■■■□□ 2.77
TRADD-201ENST00000345057 NBPF6Q5VWK0 638 aa32.35■■■□□ 2.77
TRADD-201ENST00000345057 DDX17Q92841 729 aaKnown RBP32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms