RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
BRAT1-201ENST00000340611 DAXXQ9UER7 740 aaPredicted RBP19.53■□□□□ 0.72
BRAT1-201ENST00000340611 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
BRAT1-201ENST00000340611 MST1RQ04912 1400 aa19.51■□□□□ 0.71
BRAT1-201ENST00000340611 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
BRAT1-201ENST00000340611 MAP3K19Q56UN5 1328 aa19.5■□□□□ 0.71
BRAT1-201ENST00000340611 MSH6P52701 1360 aa19.5■□□□□ 0.71
BRAT1-201ENST00000340611 TCP11L2Q8N4U5 519 aa19.5■□□□□ 0.71
BRAT1-201ENST00000340611 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
BRAT1-201ENST00000340611 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
BRAT1-201ENST00000340611 PNPLA6Q8IY17 1366 aa19.49■□□□□ 0.71
BRAT1-201ENST00000340611 CADPS2Q86UW7 1296 aa19.48■□□□□ 0.71
BRAT1-201ENST00000340611 PEAK1Q9H792 1746 aa19.48■□□□□ 0.71
BRAT1-201ENST00000340611 LTV1Q96GA3 475 aaPredicted RBP19.48■□□□□ 0.71
BRAT1-201ENST00000340611 RRP1P56182 461 aaKnown RBP19.47■□□□□ 0.71
BRAT1-201ENST00000340611 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
BRAT1-201ENST00000340611 IL13P35225 146 aa19.47■□□□□ 0.71
BRAT1-201ENST00000340611 MARF1Q9Y4F3 1742 aaKnown RBP19.47■□□□□ 0.71
BRAT1-201ENST00000340611 AEBP1Q8IUX7 1158 aa19.46■□□□□ 0.71
BRAT1-201ENST00000340611 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
BRAT1-201ENST00000340611 PDE4AP27815 886 aa19.46■□□□□ 0.71
BRAT1-201ENST00000340611 AMPHP49418 695 aa19.45■□□□□ 0.7
BRAT1-201ENST00000340611 EIF4A2Q14240 407 aaKnown RBP19.45■□□□□ 0.7
BRAT1-201ENST00000340611 CABLES1Q8TDN4 633 aa19.45■□□□□ 0.7
BRAT1-201ENST00000340611 USP31Q70CQ4 1352 aa19.45■□□□□ 0.7
BRAT1-201ENST00000340611 PRKAR2BP31323 418 aa19.45■□□□□ 0.7
BRAT1-201ENST00000340611 FAM43AQ8N2R8 423 aa19.45■□□□□ 0.7
BRAT1-201ENST00000340611 SLC4A3P48751 1232 aa19.44■□□□□ 0.7
BRAT1-201ENST00000340611 PHACTR3Q96KR7 559 aa19.44■□□□□ 0.7
BRAT1-201ENST00000340611 HSP90AA2PQ14568 343 aaPredicted RBP19.44■□□□□ 0.7
BRAT1-201ENST00000340611 SKAP1Q86WV1 359 aa19.43■□□□□ 0.7
BRAT1-201ENST00000340611 PLEKHF1Q96S99 279 aa19.43■□□□□ 0.7
BRAT1-201ENST00000340611 NFKBIBQ15653 356 aa19.43■□□□□ 0.7
BRAT1-201ENST00000340611 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
BRAT1-201ENST00000340611 SLAIN2Q9P270 581 aa19.43■□□□□ 0.7
BRAT1-201ENST00000340611 CDK12Q9NYV4 1490 aaPredicted RBP19.42■□□□□ 0.7
BRAT1-201ENST00000340611 RCAN3Q9UKA8 241 aa19.42■□□□□ 0.7
BRAT1-201ENST00000340611 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
BRAT1-201ENST00000340611 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
BRAT1-201ENST00000340611 ZNF521Q96K83 1311 aa19.41■□□□□ 0.7
BRAT1-201ENST00000340611 WWC1Q8IX03 1113 aa19.41■□□□□ 0.7
BRAT1-201ENST00000340611 SULT6B1Q6IMI4 303 aa19.4■□□□□ 0.7
BRAT1-201ENST00000340611 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
BRAT1-201ENST00000340611 INSRP06213 1382 aa19.4■□□□□ 0.7
BRAT1-201ENST00000340611 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
BRAT1-201ENST00000340611 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
BRAT1-201ENST00000340611 BACH2Q9BYV9 841 aa19.39■□□□□ 0.69
BRAT1-201ENST00000340611 USHBP1Q8N6Y0 703 aa19.38■□□□□ 0.69
BRAT1-201ENST00000340611 HOXC9P31274 260 aa19.38■□□□□ 0.69
BRAT1-201ENST00000340611 DCCP43146 1447 aa19.38■□□□□ 0.69
BRAT1-201ENST00000340611 GCP02774 474 aa19.38■□□□□ 0.69
BRAT1-201ENST00000340611 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
BRAT1-201ENST00000340611 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
BRAT1-201ENST00000340611 PLIN1O60240 522 aa19.37■□□□□ 0.69
BRAT1-201ENST00000340611 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
BRAT1-201ENST00000340611 TRPM3Q9HCF6 1732 aaPredicted RBP19.37■□□□□ 0.69
BRAT1-201ENST00000340611 NCOA3Q9Y6Q9 1424 aa19.36■□□□□ 0.69
BRAT1-201ENST00000340611 RIPK4P57078 832 aa19.36■□□□□ 0.69
BRAT1-201ENST00000340611 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
BRAT1-201ENST00000340611 LTN1O94822 1766 aa19.36■□□□□ 0.69
BRAT1-201ENST00000340611 RRAGDQ9NQL2 400 aaPredicted RBP19.35■□□□□ 0.69
BRAT1-201ENST00000340611 SBNO1A3KN83 1393 aa19.35■□□□□ 0.69
BRAT1-201ENST00000340611 FLT4P35916 1363 aa19.35■□□□□ 0.69
BRAT1-201ENST00000340611 FCHSD2O94868 740 aa19.35■□□□□ 0.69
BRAT1-201ENST00000340611 RBM10P98175 930 aaKnown RBP19.35■□□□□ 0.69
BRAT1-201ENST00000340611 EYA1Q99502 592 aa19.35■□□□□ 0.69
BRAT1-201ENST00000340611 NPHP3Q7Z494 1330 aa19.35■□□□□ 0.69
BRAT1-201ENST00000340611 KIF1AQ12756 1690 aa19.34■□□□□ 0.69
BRAT1-201ENST00000340611 SLFN5Q08AF3 891 aa19.34■□□□□ 0.69
BRAT1-201ENST00000340611 TRIM35Q9UPQ4 493 aa19.34■□□□□ 0.69
BRAT1-201ENST00000340611 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
BRAT1-201ENST00000340611 ARXQ96QS3 562 aa19.33■□□□□ 0.69
BRAT1-201ENST00000340611 FAM83GA6ND36 823 aa19.33■□□□□ 0.68
BRAT1-201ENST00000340611 DCTN1Q14203 1278 aa19.33■□□□□ 0.68
BRAT1-201ENST00000340611 LRRC59Q96AG4 307 aaKnown RBP19.33■□□□□ 0.68
BRAT1-201ENST00000340611 AXIN2Q9Y2T1 843 aa19.33■□□□□ 0.68
BRAT1-201ENST00000340611 CHRNA2Q15822 529 aa19.32■□□□□ 0.68
BRAT1-201ENST00000340611 NFAT5O94916 1531 aa19.32■□□□□ 0.68
BRAT1-201ENST00000340611 TSR2Q969E8 191 aaKnown RBP19.31■□□□□ 0.68
BRAT1-201ENST00000340611 HSP90AA1P07900 732 aaKnown RBP19.3■□□□□ 0.68
BRAT1-201ENST00000340611 PXDNQ92626 1479 aa19.3■□□□□ 0.68
BRAT1-201ENST00000340611 MED1Q15648 1581 aaPredicted RBP19.29■□□□□ 0.68
BRAT1-201ENST00000340611 MS4A1P11836 297 aa19.29■□□□□ 0.68
BRAT1-201ENST00000340611 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
BRAT1-201ENST00000340611 ARHGEF25Q86VW2 580 aa19.28■□□□□ 0.68
BRAT1-201ENST00000340611 KCNH5Q8NCM2 988 aa19.28■□□□□ 0.68
BRAT1-201ENST00000340611 SPATA31A3Q5VYP0 1347 aa19.28■□□□□ 0.68
BRAT1-201ENST00000340611 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-201ENST00000340611 RGPD2P0DJD1 1756 aa19.28■□□□□ 0.68
BRAT1-201ENST00000340611 IP6K1Q92551 441 aa19.28■□□□□ 0.68
BRAT1-201ENST00000340611 RGPD5Q99666 1765 aa19.27■□□□□ 0.68
BRAT1-201ENST00000340611 NBPF6Q5VWK0 638 aa19.27■□□□□ 0.68
BRAT1-201ENST00000340611 NBPF4Q96M43 638 aa19.27■□□□□ 0.68
BRAT1-201ENST00000340611 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
BRAT1-201ENST00000340611 USP19O94966 1318 aa19.27■□□□□ 0.67
BRAT1-201ENST00000340611 USP54Q70EL1 1684 aa19.26■□□□□ 0.67
BRAT1-201ENST00000340611 TNS3Q68CZ2 1445 aa19.26■□□□□ 0.67
BRAT1-201ENST00000340611 FRAT2O75474 233 aaPredicted RBP19.26■□□□□ 0.67
BRAT1-201ENST00000340611 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
BRAT1-201ENST00000340611 NFE2L2Q16236 605 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms