RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 NUCB1Q02818 461 aa24.97■■□□□ 1.59
CDCA4-201ENST00000336219 EDC4Q6P2E9 1401 aaKnown RBP24.97■■□□□ 1.59
CDCA4-201ENST00000336219 CDK12Q9NYV4 1490 aaPredicted RBP24.95■■□□□ 1.59
CDCA4-201ENST00000336219 EMILIN1Q9Y6C2 1016 aa24.95■■□□□ 1.58
CDCA4-201ENST00000336219 NRXN3Q9Y4C0 1643 aa24.95■■□□□ 1.58
CDCA4-201ENST00000336219 VAMP4O75379 141 aa24.94■■□□□ 1.58
CDCA4-201ENST00000336219 CALD1Q05682 793 aaKnown RBP24.94■■□□□ 1.58
CDCA4-201ENST00000336219 THUMPD2Q9BTF0 503 aaKnown RBP24.94■■□□□ 1.58
CDCA4-201ENST00000336219 FOXD4L1Q9NU39 408 aa24.94■■□□□ 1.58
CDCA4-201ENST00000336219 PTCH1Q13635 1447 aa24.93■■□□□ 1.58
CDCA4-201ENST00000336219 IL13P35225 146 aa24.93■■□□□ 1.58
CDCA4-201ENST00000336219 DLG5Q8TDM6 1919 aa24.93■■□□□ 1.58
CDCA4-201ENST00000336219 TSPOAP1O95153 1857 aa24.93■■□□□ 1.58
CDCA4-201ENST00000336219 DIP2BQ9P265 1576 aa24.93■■□□□ 1.58
CDCA4-201ENST00000336219 WASLO00401 505 aaPredicted RBP24.92■■□□□ 1.58
CDCA4-201ENST00000336219 MRPL50Q8N5N7 158 aaKnown RBP24.92■■□□□ 1.58
CDCA4-201ENST00000336219 PIK3R4Q99570 1358 aa24.92■■□□□ 1.58
CDCA4-201ENST00000336219 DDIT3P35638 169 aa24.92■■□□□ 1.58
CDCA4-201ENST00000336219 ARHGAP45Q92619 1136 aa24.92■■□□□ 1.58
CDCA4-201ENST00000336219 IFT57Q9NWB7 429 aa24.92■■□□□ 1.58
CDCA4-201ENST00000336219 ZBTB7BO15156 539 aaPredicted RBP24.91■■□□□ 1.58
CDCA4-201ENST00000336219 CHD1LQ86WJ1 897 aa24.91■■□□□ 1.58
CDCA4-201ENST00000336219 NME9Q86XW9 330 aa24.91■■□□□ 1.58
CDCA4-201ENST00000336219 AATKQ6ZMQ8 1374 aa24.91■■□□□ 1.58
CDCA4-201ENST00000336219 GNAI1P63096 354 aa24.91■■□□□ 1.58
CDCA4-201ENST00000336219 FAM69CQ0P6D2 419 aa24.91■■□□□ 1.58
CDCA4-201ENST00000336219 TNPO1Q92973 898 aaKnown RBP24.91■■□□□ 1.58
CDCA4-201ENST00000336219 C1orf115Q9H7X2 142 aa24.91■■□□□ 1.58
CDCA4-201ENST00000336219 MON2Q7Z3U7 1717 aa24.91■■□□□ 1.58
CDCA4-201ENST00000336219 RBM25P49756 843 aaKnown RBP24.9■■□□□ 1.58
CDCA4-201ENST00000336219 TSPYL6Q8N831 410 aa24.9■■□□□ 1.58
CDCA4-201ENST00000336219 GRPEL1Q9HAV7 217 aa24.9■■□□□ 1.58
CDCA4-201ENST00000336219 ZNF853P0CG23 659 aa24.9■■□□□ 1.58
CDCA4-201ENST00000336219 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
CDCA4-201ENST00000336219 NAP1L5Q96NT1 182 aaPredicted RBP24.9■■□□□ 1.58
CDCA4-201ENST00000336219 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
CDCA4-201ENST00000336219 CD2BP2O95400 341 aaKnown RBP24.89■■□□□ 1.58
CDCA4-201ENST00000336219 MRE11P49959 708 aa24.89■■□□□ 1.58
CDCA4-201ENST00000336219 DDX11L8A8MPP1 907 aa24.89■■□□□ 1.57
CDCA4-201ENST00000336219 CHMP4BQ9H444 224 aaKnown RBP24.89■■□□□ 1.57
CDCA4-201ENST00000336219 MBIPQ9NS73 344 aa24.88■■□□□ 1.57
CDCA4-201ENST00000336219 ZRANB1Q9UGI0 708 aa24.88■■□□□ 1.57
CDCA4-201ENST00000336219 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
CDCA4-201ENST00000336219 METP08581 1390 aa24.87■■□□□ 1.57
CDCA4-201ENST00000336219 CPS1P31327 1500 aa24.87■■□□□ 1.57
CDCA4-201ENST00000336219 KNDC1Q76NI1 1749 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 GAS2L3Q86XJ1 694 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 KIF2CQ99661 725 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 CLCN1P35523 988 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 ANKRD45Q5TZF3 282 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 GCC1Q96CN9 775 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 ABCC4O15439 1325 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 AKAP12Q02952 1782 aa24.86■■□□□ 1.57
CDCA4-201ENST00000336219 RBM42Q9BTD8 480 aaKnown RBP24.85■■□□□ 1.57
CDCA4-201ENST00000336219 BMP2KLQ5H9B9 411 aa24.85■■□□□ 1.57
CDCA4-201ENST00000336219 SNX21Q969T3 373 aa24.85■■□□□ 1.57
CDCA4-201ENST00000336219 NUDT16Q96DE0 195 aaKnown RBP24.84■■□□□ 1.57
CDCA4-201ENST00000336219 C3P01024 1663 aa24.84■■□□□ 1.57
CDCA4-201ENST00000336219 ERBB4Q15303 1308 aa24.84■■□□□ 1.57
CDCA4-201ENST00000336219 ELL2O00472 640 aaPredicted RBP24.84■■□□□ 1.57
CDCA4-201ENST00000336219 LMOD3Q0VAK6 560 aa24.84■■□□□ 1.57
CDCA4-201ENST00000336219 COG3Q96JB2 828 aa24.84■■□□□ 1.57
CDCA4-201ENST00000336219 ITSN1Q15811 1721 aa24.83■■□□□ 1.57
CDCA4-201ENST00000336219 TWISTNBQ3B726 338 aaPredicted RBP24.83■■□□□ 1.57
CDCA4-201ENST00000336219 CFAP44Q96MT7 982 aa24.83■■□□□ 1.57
CDCA4-201ENST00000336219 TXNDC2Q86VQ3 553 aa24.83■■□□□ 1.57
CDCA4-201ENST00000336219 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.82■■□□□ 1.56
CDCA4-201ENST00000336219 MLECQ14165 292 aa24.82■■□□□ 1.56
CDCA4-201ENST00000336219 CCDC61Q9Y6R9 512 aa24.82■■□□□ 1.56
CDCA4-201ENST00000336219 NCKAP5LQ9HCH0 1330 aa24.81■■□□□ 1.56
CDCA4-201ENST00000336219 RRS1Q15050 365 aaKnown RBP24.81■■□□□ 1.56
CDCA4-201ENST00000336219 TECPR2O15040 1411 aa24.81■■□□□ 1.56
CDCA4-201ENST00000336219 RAB3GAP1Q15042 981 aa24.8■■□□□ 1.56
CDCA4-201ENST00000336219 SIRT2Q8IXJ6 389 aa24.8■■□□□ 1.56
CDCA4-201ENST00000336219 C8orf58Q8NAV2 365 aa24.8■■□□□ 1.56
CDCA4-201ENST00000336219 HSP90AA1P07900 732 aaKnown RBP24.79■■□□□ 1.56
CDCA4-201ENST00000336219 TBC1D9Q6ZT07 1266 aa24.79■■□□□ 1.56
CDCA4-201ENST00000336219 SIRT1Q96EB6 747 aa24.79■■□□□ 1.56
CDCA4-201ENST00000336219 FAM83GA6ND36 823 aa24.78■■□□□ 1.56
CDCA4-201ENST00000336219 NRKQ7Z2Y5 1582 aa24.78■■□□□ 1.56
CDCA4-201ENST00000336219 API5Q9BZZ5 524 aaKnown RBP24.77■■□□□ 1.56
CDCA4-201ENST00000336219 GBP4Q96PP9 640 aa24.76■■□□□ 1.55
CDCA4-201ENST00000336219 ESPNB1AK53 854 aa24.75■■□□□ 1.55
CDCA4-201ENST00000336219 SSFA2P28290 1259 aa24.75■■□□□ 1.55
CDCA4-201ENST00000336219 DCTN1Q14203 1278 aa24.74■■□□□ 1.55
CDCA4-201ENST00000336219 GAS2L2Q8NHY3 880 aa24.74■■□□□ 1.55
CDCA4-201ENST00000336219 CIZ1Q9ULV3 898 aaPredicted RBP24.74■■□□□ 1.55
CDCA4-201ENST00000336219 PRR36Q9H6K5 1346 aa24.74■■□□□ 1.55
CDCA4-201ENST00000336219 K7ELQ4 463 aaPredicted RBP24.73■■□□□ 1.55
CDCA4-201ENST00000336219 KIF24Q5T7B8 1368 aa24.73■■□□□ 1.55
CDCA4-201ENST00000336219 HDGFP51858 240 aaKnown RBP24.7■■□□□ 1.54
CDCA4-201ENST00000336219 TRIM44Q96DX7 344 aaPredicted RBP24.69■■□□□ 1.54
CDCA4-201ENST00000336219 EIF4A2Q14240 407 aaKnown RBP24.69■■□□□ 1.54
CDCA4-201ENST00000336219 AEBP1Q8IUX7 1158 aa24.69■■□□□ 1.54
CDCA4-201ENST00000336219 GSPT1P15170 499 aaKnown RBP24.68■■□□□ 1.54
CDCA4-201ENST00000336219 SULT6B1Q6IMI4 303 aa24.67■■□□□ 1.54
CDCA4-201ENST00000336219 ISY1Q9ULR0 285 aaKnown RBP24.67■■□□□ 1.54
CDCA4-201ENST00000336219 INTS3Q68E01 1043 aaKnown RBP24.67■■□□□ 1.54
CDCA4-201ENST00000336219 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
CDCA4-201ENST00000336219 TOPAZ1Q8N9V7 1692 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms