RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RINLQ6ZS11 566 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 FMNL3Q8IVF7 1028 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 COQ9O75208 318 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 PLCB2Q00722 1185 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 ARMCX6Q7L4S7 300 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 TSPY26PQ9H489 355 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 CTTNBP2Q8WZ74 1663 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 ANKRD33BA6NCL7 494 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 ZRSR1Q15695 479 aaKnown RBP10.29□□□□□ -0.76
TDP1-201ENST00000335725 HSP90AB4PQ58FF6 505 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 KIAA1524Q8TCG1 905 aa10.29□□□□□ -0.76
TDP1-201ENST00000335725 SYAP1Q96A49 352 aaPredicted RBP10.29□□□□□ -0.76
TDP1-201ENST00000335725 TMTC2Q8N394 836 aa10.28□□□□□ -0.76
TDP1-201ENST00000335725 SMC2O95347 1197 aa10.28□□□□□ -0.76
TDP1-201ENST00000335725 MBD3O95983 291 aa10.28□□□□□ -0.76
TDP1-201ENST00000335725 AP1ARQ63HQ0 302 aa10.28□□□□□ -0.76
TDP1-201ENST00000335725 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
TDP1-201ENST00000335725 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
TDP1-201ENST00000335725 KDM5BQ9UGL1 1544 aa10.28□□□□□ -0.76
TDP1-201ENST00000335725 UACAQ9BZF9 1416 aa10.27□□□□□ -0.76
TDP1-201ENST00000335725 CGNL1Q0VF96 1302 aa10.27□□□□□ -0.76
TDP1-201ENST00000335725 EIF3JO75822 258 aaKnown RBP10.27□□□□□ -0.77
TDP1-201ENST00000335725 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 IQUBQ8NA54 791 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 SETSIPP0DME0 302 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 MCTP1Q6DN14 999 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 NEK11Q8NG66 645 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 PMFBP1Q8TBY8 1022 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 SYNJ1O43426 1573 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 BAZ1AQ9NRL2 1556 aaPredicted RBP10.27□□□□□ -0.77
TDP1-201ENST00000335725 GIMAP7Q8NHV1 300 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.77
TDP1-201ENST00000335725 TEX13AQ9BXU3 409 aaPredicted RBP10.27□□□□□ -0.77
TDP1-201ENST00000335725 TTC12Q9H892 705 aaPredicted RBP10.27□□□□□ -0.77
TDP1-201ENST00000335725 ETAA1Q9NY74 926 aa10.26□□□□□ -0.77
TDP1-201ENST00000335725 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
TDP1-201ENST00000335725 KIF15Q9NS87 1388 aa10.26□□□□□ -0.77
TDP1-201ENST00000335725 CCP110O43303 1012 aa10.26□□□□□ -0.77
TDP1-201ENST00000335725 SSFA2P28290 1259 aa10.26□□□□□ -0.77
TDP1-201ENST00000335725 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
TDP1-201ENST00000335725 LMBRD1Q9NUN5 540 aa10.26□□□□□ -0.77
TDP1-201ENST00000335725 NFATC2IPQ8NCF5 419 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 LCMT1Q9UIC8 334 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 KIF2AO00139 706 aaPredicted RBP10.25□□□□□ -0.77
TDP1-201ENST00000335725 RNF214Q8ND24 703 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 MKL1Q969V6 931 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 UNC13AQ9UPW8 1703 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 SYCE3A1L190 88 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 RBM6P78332 1123 aaKnown RBP10.25□□□□□ -0.77
TDP1-201ENST00000335725 CCDC27Q2M243 656 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 LEKR1Q6ZMV7 388 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 RPS6KL1Q9Y6S9 549 aa10.25□□□□□ -0.77
TDP1-201ENST00000335725 CT47B1P0C2W7 299 aaPredicted RBP10.24□□□□□ -0.77
TDP1-201ENST00000335725 KLHL23Q8NBE8 558 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 ANKRD18BA2A2Z9 1011 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 CPP00450 1065 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 TRAF1Q13077 416 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 STAG1Q8WVM7 1258 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 TSPAN18Q96SJ8 248 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 ARAP1Q96P48 1450 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 C21orf2O43822 256 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 ADCY2Q08462 1091 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 C17orf53Q8N3J3 647 aaPredicted RBP10.24□□□□□ -0.77
TDP1-201ENST00000335725 CCDC97Q96F63 343 aaPredicted RBP10.24□□□□□ -0.77
TDP1-201ENST00000335725 PSD3Q9NYI0 1048 aa10.24□□□□□ -0.77
TDP1-201ENST00000335725 CPSF2Q9P2I0 782 aaKnown RBP10.24□□□□□ -0.77
TDP1-201ENST00000335725 RTEL1-TNFRSF6BF6WH68 1400 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 IGHDP01880 384 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 SH3GL3Q99963 347 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 IRAK4Q9NWZ3 460 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 K7ELQ4 463 aaPredicted RBP10.23□□□□□ -0.77
TDP1-201ENST00000335725 PAX7P23759 505 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 MORC1Q86VD1 984 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 ERO1AQ96HE7 468 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 FAM107BQ9H098 131 aa10.23□□□□□ -0.77
TDP1-201ENST00000335725 ZRSR2Q15696 482 aaKnown RBP10.22□□□□□ -0.77
TDP1-201ENST00000335725 NEBLO76041 1014 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 MNAT1P51948 309 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 RWDD2BP57060 319 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 EFCAB13Q8IY85 973 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 MIEF2Q96C03 454 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 TMX4Q9H1E5 349 aaPredicted RBP10.22□□□□□ -0.77
TDP1-201ENST00000335725 ST7Q9NRC1 585 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 ARGLU1Q9NWB6 273 aaPredicted RBP10.22□□□□□ -0.77
TDP1-201ENST00000335725 MIA2Q96PC5 1412 aa10.22□□□□□ -0.77
TDP1-201ENST00000335725 ATP8B1O43520 1251 aa10.21□□□□□ -0.77
TDP1-201ENST00000335725 CAND2O75155 1236 aa10.21□□□□□ -0.77
TDP1-201ENST00000335725 ADCY5O95622 1261 aa10.21□□□□□ -0.77
TDP1-201ENST00000335725 CLUAP1Q96AJ1 413 aa10.21□□□□□ -0.77
TDP1-201ENST00000335725 EIF3CLB5ME19 914 aaKnown RBP10.21□□□□□ -0.78
TDP1-201ENST00000335725 ACTN2P35609 894 aa10.21□□□□□ -0.78
TDP1-201ENST00000335725 RBM5P52756 815 aaKnown RBP eCLIP10.21□□□□□ -0.78
TDP1-201ENST00000335725 C1QTNF12Q5T7M4 302 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms