RNA–Protein interactions for RNA: ENST00000334975.13

KTN1-201, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-201ENST00000334975 E2F4Q16254 413 aa10.08□□□□□ -0.8
KTN1-201ENST00000334975 COL16A1Q07092 1604 aaPredicted RBP10.07□□□□□ -0.8
KTN1-201ENST00000334975 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
KTN1-201ENST00000334975 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
KTN1-201ENST00000334975 NUDT16Q96DE0 195 aaKnown RBP10.07□□□□□ -0.8
KTN1-201ENST00000334975 LARP6Q9BRS8 491 aaKnown RBP10.07□□□□□ -0.8
KTN1-201ENST00000334975 NHSL1Q5SYE7 1610 aa10.06□□□□□ -0.8
KTN1-201ENST00000334975 USP32Q8NFA0 1604 aa10.06□□□□□ -0.8
KTN1-201ENST00000334975 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
KTN1-201ENST00000334975 HSP90B1P14625 803 aaKnown RBP10.06□□□□□ -0.8
KTN1-201ENST00000334975 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
KTN1-201ENST00000334975 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
KTN1-201ENST00000334975 ANKARQ7Z5J8 1434 aa10.06□□□□□ -0.8
KTN1-201ENST00000334975 TULP4Q9NRJ4 1543 aa10.06□□□□□ -0.8
KTN1-201ENST00000334975 TIE1P35590 1138 aa10.06□□□□□ -0.8
KTN1-201ENST00000334975 ST20-MTHFSA0A0A6YYL1 179 aa10.05□□□□□ -0.8
KTN1-201ENST00000334975 EVX2Q03828 476 aa10.05□□□□□ -0.8
KTN1-201ENST00000334975 PSME1Q06323 249 aa10.05□□□□□ -0.8
KTN1-201ENST00000334975 CRISPLD2Q9H0B8 497 aa10.05□□□□□ -0.8
KTN1-201ENST00000334975 JCADQ9P266 1359 aa10.05□□□□□ -0.8
KTN1-201ENST00000334975 SOS2Q07890 1332 aaPredicted RBP10.05□□□□□ -0.8
KTN1-201ENST00000334975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
KTN1-201ENST00000334975 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
KTN1-201ENST00000334975 EVC2Q86UK5 1308 aa10.04□□□□□ -0.8
KTN1-201ENST00000334975 KRT28Q7Z3Y7 464 aa10.04□□□□□ -0.8
KTN1-201ENST00000334975 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
KTN1-201ENST00000334975 ATP7BP35670 1465 aa10.04□□□□□ -0.8
KTN1-201ENST00000334975 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
KTN1-201ENST00000334975 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
KTN1-201ENST00000334975 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
KTN1-201ENST00000334975 USP47Q96K76 1375 aa10.03□□□□□ -0.8
KTN1-201ENST00000334975 KIF1AQ12756 1690 aa10.03□□□□□ -0.8
KTN1-201ENST00000334975 LMOD2Q6P5Q4 547 aa10.03□□□□□ -0.8
KTN1-201ENST00000334975 PXDNQ92626 1479 aa10.03□□□□□ -0.8
KTN1-201ENST00000334975 TRIM35Q9UPQ4 493 aa10.02□□□□□ -0.8
KTN1-201ENST00000334975 DISP3Q9P2K9 1392 aa10.02□□□□□ -0.81
KTN1-201ENST00000334975 SEMA3EO15041 775 aa10.02□□□□□ -0.81
KTN1-201ENST00000334975 KCTD17Q8N5Z5 321 aa10.02□□□□□ -0.81
KTN1-201ENST00000334975 MFSD10Q14728 455 aa10.01□□□□□ -0.81
KTN1-201ENST00000334975 CABP1Q9NZU7 370 aa10.01□□□□□ -0.81
KTN1-201ENST00000334975 PPIP5K1Q6PFW1 1433 aa10.01□□□□□ -0.81
KTN1-201ENST00000334975 PDE4AP27815 886 aa10.01□□□□□ -0.81
KTN1-201ENST00000334975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.812e-8■■■■□ 19.7
KTN1-201ENST00000334975 MED1Q15648 1581 aaPredicted RBP10.01□□□□□ -0.81
KTN1-201ENST00000334975 ACEP12821 1306 aa10.01□□□□□ -0.81
KTN1-201ENST00000334975 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
KTN1-201ENST00000334975 TESK2Q96S53 571 aa10□□□□□ -0.81
KTN1-201ENST00000334975 SPATA31A6Q5VVP1 1343 aa10□□□□□ -0.81
KTN1-201ENST00000334975 ITSN1Q15811 1721 aa10□□□□□ -0.81
KTN1-201ENST00000334975 SHPRHQ149N8 1683 aa10□□□□□ -0.81
KTN1-201ENST00000334975 RAD21O60216 631 aa10□□□□□ -0.81
KTN1-201ENST00000334975 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
KTN1-201ENST00000334975 SBNO2Q9Y2G9 1366 aa10□□□□□ -0.81
KTN1-201ENST00000334975 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
KTN1-201ENST00000334975 MEX3CQ5U5Q3 659 aaKnown RBP9.99□□□□□ -0.81
KTN1-201ENST00000334975 SPATA31A3Q5VYP0 1347 aa9.99□□□□□ -0.81
KTN1-201ENST00000334975 HAX1O00165 279 aa9.99□□□□□ -0.81
KTN1-201ENST00000334975 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
KTN1-201ENST00000334975 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
KTN1-201ENST00000334975 TOPAZ1Q8N9V7 1692 aa9.99□□□□□ -0.81
KTN1-201ENST00000334975 LRP6O75581 1613 aa9.98□□□□□ -0.81
KTN1-201ENST00000334975 TMC1Q8TDI8 760 aa9.98□□□□□ -0.81
KTN1-201ENST00000334975 RGS22Q8NE09 1264 aa9.98□□□□□ -0.81
KTN1-201ENST00000334975 CABLES1Q8TDN4 633 aa9.98□□□□□ -0.81
KTN1-201ENST00000334975 TNS3Q68CZ2 1445 aa9.97□□□□□ -0.81
KTN1-201ENST00000334975 POLR3AO14802 1390 aaPredicted RBP9.97□□□□□ -0.81
KTN1-201ENST00000334975 APBB1O00213 710 aa9.97□□□□□ -0.81
KTN1-201ENST00000334975 MTMR7Q9Y216 660 aa9.97□□□□□ -0.81
KTN1-201ENST00000334975 SBNO1A3KN83 1393 aa9.97□□□□□ -0.81
KTN1-201ENST00000334975 ATAD2Q6PL18 1390 aa9.97□□□□□ -0.81
KTN1-201ENST00000334975 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
KTN1-201ENST00000334975 TMF1P82094 1093 aa9.97□□□□□ -0.81
KTN1-201ENST00000334975 NUTM2GQ5VZR2 741 aa9.97□□□□□ -0.81
KTN1-201ENST00000334975 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
KTN1-201ENST00000334975 HSPA5P11021 654 aaKnown RBP9.96□□□□□ -0.81
KTN1-201ENST00000334975 SLC12A5Q9H2X9 1139 aa9.96□□□□□ -0.81
KTN1-201ENST00000334975 FOXD4L5Q5VV16 416 aaPredicted RBP9.96□□□□□ -0.82
KTN1-201ENST00000334975 FOXD4L4Q8WXT5 416 aaPredicted RBP9.96□□□□□ -0.82
KTN1-201ENST00000334975 C8orf37Q96NL8 207 aa9.96□□□□□ -0.82
KTN1-201ENST00000334975 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
KTN1-201ENST00000334975 SLC24A3Q9HC58 644 aa9.95□□□□□ -0.82
KTN1-201ENST00000334975 TRPM3Q9HCF6 1732 aaPredicted RBP9.95□□□□□ -0.82
KTN1-201ENST00000334975 ABTB2Q8N961 1025 aa9.95□□□□□ -0.82
KTN1-201ENST00000334975 POLR3GLQ9BT43 218 aa9.95□□□□□ -0.82
KTN1-201ENST00000334975 ARHGEF10O15013 1369 aa9.95□□□□□ -0.82
KTN1-201ENST00000334975 ATN1P54259 1190 aaPredicted RBP9.94□□□□□ -0.82
KTN1-201ENST00000334975 UBE2Q2Q8WVN8 375 aa9.94□□□□□ -0.82
KTN1-201ENST00000334975 RGS17Q9UGC6 210 aaPredicted RBP9.94□□□□□ -0.82
KTN1-201ENST00000334975 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
KTN1-201ENST00000334975 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
KTN1-201ENST00000334975 CAMK2BQ13554 666 aa9.94□□□□□ -0.82
KTN1-201ENST00000334975 PDCD7Q8N8D1 485 aaKnown RBP9.94□□□□□ -0.82
KTN1-201ENST00000334975 NGLY1Q96IV0 654 aa9.94□□□□□ -0.82
KTN1-201ENST00000334975 USP6P35125 1406 aa9.93□□□□□ -0.82
KTN1-201ENST00000334975 KTN1Q86UP2 1357 aaKnown RBP9.93□□□□□ -0.82
KTN1-201ENST00000334975 ALS2Q96Q42 1657 aa9.92□□□□□ -0.82
KTN1-201ENST00000334975 CDCA8Q53HL2 280 aa9.92□□□□□ -0.82
KTN1-201ENST00000334975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.92□□□□□ -0.82
KTN1-201ENST00000334975 HDGFL2Q7Z4V5 671 aaPredicted RBP9.92□□□□□ -0.82
KTN1-201ENST00000334975 GPHNQ9NQX3 736 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms