RNA–Protein interactions for RNA: ENST00000334295.8

TPGS2-201, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPGS2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-201ENST00000334295 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
TPGS2-201ENST00000334295 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
TPGS2-201ENST00000334295 FOXD4L3Q6VB84 417 aaPredicted RBP18.8■□□□□ 0.6
TPGS2-201ENST00000334295 NUDT16Q96DE0 195 aaKnown RBP18.8■□□□□ 0.6
TPGS2-201ENST00000334295 GBP4Q96PP9 640 aa18.8■□□□□ 0.6
TPGS2-201ENST00000334295 MYO3AQ8NEV4 1616 aa18.8■□□□□ 0.6
TPGS2-201ENST00000334295 PRKCSHP14314 528 aaPredicted RBP18.8■□□□□ 0.6
TPGS2-201ENST00000334295 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
TPGS2-201ENST00000334295 TRIM44Q96DX7 344 aaPredicted RBP18.8■□□□□ 0.6
TPGS2-201ENST00000334295 CALD1Q05682 793 aaKnown RBP18.79■□□□□ 0.6
TPGS2-201ENST00000334295 BMP2KLQ5H9B9 411 aa18.79■□□□□ 0.6
TPGS2-201ENST00000334295 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
TPGS2-201ENST00000334295 F6X3S4 739 aa18.78■□□□□ 0.6
TPGS2-201ENST00000334295 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
TPGS2-201ENST00000334295 GRPEL1Q9HAV7 217 aa18.78■□□□□ 0.6
TPGS2-201ENST00000334295 MLH3Q9UHC1 1453 aa18.78■□□□□ 0.6
TPGS2-201ENST00000334295 HECW2Q9P2P5 1572 aa18.78■□□□□ 0.6
TPGS2-201ENST00000334295 LMTK2Q8IWU2 1503 aa18.78■□□□□ 0.6
TPGS2-201ENST00000334295 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
TPGS2-201ENST00000334295 CHAMP1Q96JM3 812 aa18.78■□□□□ 0.6
TPGS2-201ENST00000334295 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.6
TPGS2-201ENST00000334295 K7ELQ4 463 aaPredicted RBP18.77■□□□□ 0.6
TPGS2-201ENST00000334295 CDC45O75419 566 aa18.77■□□□□ 0.6
TPGS2-201ENST00000334295 IL13P35225 146 aa18.77■□□□□ 0.6
TPGS2-201ENST00000334295 NUTM2GQ5VZR2 741 aa18.77■□□□□ 0.6
TPGS2-201ENST00000334295 DDX49Q9Y6V7 483 aaKnown RBP18.77■□□□□ 0.6
TPGS2-201ENST00000334295 SIGLEC1Q9BZZ2 1709 aa18.77■□□□□ 0.6
TPGS2-201ENST00000334295 ARHGEF28Q8N1W1 1705 aaKnown RBP18.77■□□□□ 0.59
TPGS2-201ENST00000334295 ZBTB7CA1YPR0 619 aa18.77■□□□□ 0.59
TPGS2-201ENST00000334295 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
TPGS2-201ENST00000334295 WASLO00401 505 aaPredicted RBP18.76■□□□□ 0.59
TPGS2-201ENST00000334295 MCTP1Q6DN14 999 aa18.76■□□□□ 0.59
TPGS2-201ENST00000334295 API5Q9BZZ5 524 aaKnown RBP18.76■□□□□ 0.59
TPGS2-201ENST00000334295 GSPT1P15170 499 aaKnown RBP18.76■□□□□ 0.59
TPGS2-201ENST00000334295 VIRMAQ69YN4 1812 aaKnown RBP18.76■□□□□ 0.59
TPGS2-201ENST00000334295 FOXO3O43524 673 aa18.75■□□□□ 0.59
TPGS2-201ENST00000334295 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
TPGS2-201ENST00000334295 GAS2L3Q86XJ1 694 aa18.75■□□□□ 0.59
TPGS2-201ENST00000334295 LTV1Q96GA3 475 aaPredicted RBP18.75■□□□□ 0.59
TPGS2-201ENST00000334295 RBM25P49756 843 aaKnown RBP18.75■□□□□ 0.59
TPGS2-201ENST00000334295 HSP90AB2PQ58FF8 381 aa18.75■□□□□ 0.59
TPGS2-201ENST00000334295 CFAP44Q96MT7 982 aa18.75■□□□□ 0.59
TPGS2-201ENST00000334295 MEIS3Q99687 375 aa18.75■□□□□ 0.59
TPGS2-201ENST00000334295 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
TPGS2-201ENST00000334295 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
TPGS2-201ENST00000334295 CD163L1Q9NR16 1453 aa18.74■□□□□ 0.59
TPGS2-201ENST00000334295 PTPRMP28827 1452 aa18.73■□□□□ 0.59
TPGS2-201ENST00000334295 GOLGA6L22H0YM25 854 aa18.73■□□□□ 0.59
TPGS2-201ENST00000334295 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
TPGS2-201ENST00000334295 MRE11P49959 708 aa18.73■□□□□ 0.59
TPGS2-201ENST00000334295 KIF2CQ99661 725 aa18.73■□□□□ 0.59
TPGS2-201ENST00000334295 ZNF692Q9BU19 519 aaPredicted RBP18.73■□□□□ 0.59
TPGS2-201ENST00000334295 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
TPGS2-201ENST00000334295 COL3A1P02461 1466 aaPredicted RBP18.73■□□□□ 0.59
TPGS2-201ENST00000334295 LMOD3Q0VAK6 560 aa18.72■□□□□ 0.59
TPGS2-201ENST00000334295 PLEKHM2Q8IWE5 1019 aa18.72■□□□□ 0.59
TPGS2-201ENST00000334295 PKP1Q13835 747 aa18.72■□□□□ 0.59
TPGS2-201ENST00000334295 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
TPGS2-201ENST00000334295 ZNF428Q96B54 188 aa18.71■□□□□ 0.59
TPGS2-201ENST00000334295 SLC26A8Q96RN1 970 aa18.71■□□□□ 0.59
TPGS2-201ENST00000334295 CCDC61Q9Y6R9 512 aa18.71■□□□□ 0.59
TPGS2-201ENST00000334295 PIK3C2BO00750 1634 aa18.71■□□□□ 0.58
TPGS2-201ENST00000334295 MYO5BQ9ULV0 1848 aa18.7■□□□□ 0.58
TPGS2-201ENST00000334295 NEURL4Q96JN8 1562 aa18.7■□□□□ 0.58
TPGS2-201ENST00000334295 ADGRB2O60241 1585 aa18.7■□□□□ 0.58
TPGS2-201ENST00000334295 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
TPGS2-201ENST00000334295 CAVIN1Q6NZI2 390 aaKnown RBP18.69■□□□□ 0.58
TPGS2-201ENST00000334295 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
TPGS2-201ENST00000334295 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
TPGS2-201ENST00000334295 FAM135BQ49AJ0 1406 aa18.69■□□□□ 0.58
TPGS2-201ENST00000334295 FSD2A1L4K1 749 aa18.69■□□□□ 0.58
TPGS2-201ENST00000334295 G2E3Q7L622 706 aa18.69■□□□□ 0.58
TPGS2-201ENST00000334295 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
TPGS2-201ENST00000334295 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
TPGS2-201ENST00000334295 ZGPATQ8N5A5 531 aaKnown RBP18.68■□□□□ 0.58
TPGS2-201ENST00000334295 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
TPGS2-201ENST00000334295 SDSP20132 328 aa18.68■□□□□ 0.58
TPGS2-201ENST00000334295 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
TPGS2-201ENST00000334295 SNX21Q969T3 373 aa18.67■□□□□ 0.58
TPGS2-201ENST00000334295 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
TPGS2-201ENST00000334295 CASC1Q6TDU7 716 aa18.67■□□□□ 0.58
TPGS2-201ENST00000334295 METP08581 1390 aa18.67■□□□□ 0.58
TPGS2-201ENST00000334295 ABCC4O15439 1325 aa18.67■□□□□ 0.58
TPGS2-201ENST00000334295 DTNBO60941 627 aa18.66■□□□□ 0.58
TPGS2-201ENST00000334295 TTC22Q5TAA0 569 aa18.66■□□□□ 0.58
TPGS2-201ENST00000334295 ANP32BQ92688 251 aaKnown RBP18.66■□□□□ 0.58
TPGS2-201ENST00000334295 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
TPGS2-201ENST00000334295 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
TPGS2-201ENST00000334295 ARHGAP45Q92619 1136 aa18.65■□□□□ 0.58
TPGS2-201ENST00000334295 ZFYVE9O95405 1425 aa18.65■□□□□ 0.58
TPGS2-201ENST00000334295 MSH6P52701 1360 aa18.65■□□□□ 0.58
TPGS2-201ENST00000334295 ZMYM3Q14202 1370 aa18.65■□□□□ 0.58
TPGS2-201ENST00000334295 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
TPGS2-201ENST00000334295 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
TPGS2-201ENST00000334295 INTS3Q68E01 1043 aaKnown RBP18.65■□□□□ 0.58
TPGS2-201ENST00000334295 BAG4O95429 457 aaKnown RBP18.64■□□□□ 0.57
TPGS2-201ENST00000334295 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
TPGS2-201ENST00000334295 MAP4K4O95819 1239 aaPredicted RBP18.64■□□□□ 0.57
TPGS2-201ENST00000334295 AMPHP49418 695 aa18.64■□□□□ 0.57
TPGS2-201ENST00000334295 FKBP5Q13451 457 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms