RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 HOXC9P31274 260 aa28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 GCP02774 474 aa28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 TMPOP42166 694 aaKnown RBP28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 CCDC27Q2M243 656 aa28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 SLFN5Q08AF3 891 aa28.45■■■□□ 2.14
TOP1MT-201ENST00000329245 ZBTB7CA1YPR0 619 aa28.43■■■□□ 2.14
TOP1MT-201ENST00000329245 SULT6B1Q6IMI4 303 aa28.43■■■□□ 2.14
TOP1MT-201ENST00000329245 PHF23Q9BUL5 403 aaPredicted RBP28.43■■■□□ 2.14
TOP1MT-201ENST00000329245 E9PSI1 815 aa28.42■■■□□ 2.14
TOP1MT-201ENST00000329245 RIPK4P57078 832 aa28.42■■■□□ 2.14
TOP1MT-201ENST00000329245 DUSP27Q5VZP5 1158 aa28.42■■■□□ 2.14
TOP1MT-201ENST00000329245 PHACTR3Q96KR7 559 aa28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 SPINK5Q9NQ38 1064 aaPredicted RBP28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 USP19O94966 1318 aa28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 NFAT5O94916 1531 aa28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 WDR63Q8IWG1 891 aa28.4■■■□□ 2.14
TOP1MT-201ENST00000329245 RTL1A6NKG5 1358 aa28.4■■■□□ 2.14
TOP1MT-201ENST00000329245 IP6K1Q92551 441 aa28.39■■■□□ 2.14
TOP1MT-201ENST00000329245 PXDNQ92626 1479 aa28.39■■■□□ 2.13
TOP1MT-201ENST00000329245 AEBP1Q8IUX7 1158 aa28.39■■■□□ 2.13
TOP1MT-201ENST00000329245 RCAN3Q9UKA8 241 aa28.39■■■□□ 2.13
TOP1MT-201ENST00000329245 SLIT3O75094 1523 aa28.38■■■□□ 2.13
TOP1MT-201ENST00000329245 TRMT2AQ8IZ69 625 aaKnown RBP28.38■■■□□ 2.13
TOP1MT-201ENST00000329245 LTV1Q96GA3 475 aaPredicted RBP28.38■■■□□ 2.13
TOP1MT-201ENST00000329245 ALS2Q96Q42 1657 aa28.37■■■□□ 2.13
TOP1MT-201ENST00000329245 TNS3Q68CZ2 1445 aa28.37■■■□□ 2.13
TOP1MT-201ENST00000329245 SPATA31A3Q5VYP0 1347 aa28.37■■■□□ 2.13
TOP1MT-201ENST00000329245 IRX6P78412 446 aaPredicted RBP28.36■■■□□ 2.13
TOP1MT-201ENST00000329245 EYA1Q99502 592 aa28.36■■■□□ 2.13
TOP1MT-201ENST00000329245 TRIM35Q9UPQ4 493 aa28.36■■■□□ 2.13
TOP1MT-201ENST00000329245 NFE2L2Q16236 605 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 ARHGEF25Q86VW2 580 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 ARHGEF10O15013 1369 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 LTN1O94822 1766 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 SOS2Q07890 1332 aaPredicted RBP28.32■■■□□ 2.12
TOP1MT-201ENST00000329245 IGSF1Q8N6C5 1336 aa28.32■■■□□ 2.12
TOP1MT-201ENST00000329245 ZC3H6P61129 1189 aaKnown RBP28.31■■■□□ 2.12
TOP1MT-201ENST00000329245 RGPD1P0DJD0 1748 aa28.31■■■□□ 2.12
TOP1MT-201ENST00000329245 LTBP4Q8N2S1 1624 aa28.3■■■□□ 2.12
TOP1MT-201ENST00000329245 RNF123Q5XPI4 1314 aa28.3■■■□□ 2.12
TOP1MT-201ENST00000329245 CABLES1Q8TDN4 633 aa28.3■■■□□ 2.12
TOP1MT-201ENST00000329245 MED1Q15648 1581 aaPredicted RBP28.29■■■□□ 2.12
TOP1MT-201ENST00000329245 MYH16Q9H6N6 1097 aa28.28■■■□□ 2.12
TOP1MT-201ENST00000329245 KDRP35968 1356 aa28.26■■■□□ 2.11
TOP1MT-201ENST00000329245 LMOD3Q0VAK6 560 aa28.25■■■□□ 2.11
TOP1MT-201ENST00000329245 PHRF1Q9P1Y6 1649 aaKnown RBP28.25■■■□□ 2.11
TOP1MT-201ENST00000329245 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
TOP1MT-201ENST00000329245 AXIN2Q9Y2T1 843 aa28.23■■■□□ 2.11
TOP1MT-201ENST00000329245 IL16Q14005 1332 aa28.23■■■□□ 2.11
TOP1MT-201ENST00000329245 RRP1P56182 461 aaKnown RBP28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 ERICH6BQ5W0A0 696 aa28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 USHBP1Q8N6Y0 703 aa28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 ANKRD24Q8TF21 1146 aa28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 NBPF6Q5VWK0 638 aa28.21■■■□□ 2.11
TOP1MT-201ENST00000329245 NBPF4Q96M43 638 aa28.21■■■□□ 2.11
TOP1MT-201ENST00000329245 CALD1Q05682 793 aaKnown RBP28.2■■■□□ 2.11
TOP1MT-201ENST00000329245 HAP1P54257 671 aaPredicted RBP28.19■■■□□ 2.1
TOP1MT-201ENST00000329245 LRRC59Q96AG4 307 aaKnown RBP28.19■■■□□ 2.1
TOP1MT-201ENST00000329245 THUMPD2Q9BTF0 503 aaKnown RBP28.19■■■□□ 2.1
TOP1MT-201ENST00000329245 MTHFSDQ2M296 383 aaKnown RBP28.18■■■□□ 2.1
TOP1MT-201ENST00000329245 TSR2Q969E8 191 aaKnown RBP28.18■■■□□ 2.1
TOP1MT-201ENST00000329245 FAM83GA6ND36 823 aa28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 LAS1LQ9Y4W2 734 aaKnown RBP28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 NHSL1Q5SYE7 1610 aa28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 FANCIQ9NVI1 1328 aa28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 CHRNA2Q15822 529 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 GAS2L2Q8NHY3 880 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 KIAA0232Q92628 1395 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 DCTN1Q14203 1278 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 ERBB3P21860 1342 aa28.13■■■□□ 2.09
TOP1MT-201ENST00000329245 ROBO1Q9Y6N7 1651 aa28.13■■■□□ 2.09
TOP1MT-201ENST00000329245 CPDO75976 1380 aa28.12■■■□□ 2.09
TOP1MT-201ENST00000329245 DLG5Q8TDM6 1919 aa28.12■■■□□ 2.09
TOP1MT-201ENST00000329245 PLIN1O60240 522 aa28.12■■■□□ 2.09
TOP1MT-201ENST00000329245 RTF1Q92541 710 aaKnown RBP28.11■■■□□ 2.09
TOP1MT-201ENST00000329245 CRYBG1Q9Y4K1 1723 aa28.11■■■□□ 2.09
TOP1MT-201ENST00000329245 GNAI1P63096 354 aa28.11■■■□□ 2.09
TOP1MT-201ENST00000329245 TOM1O60784 492 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 EXOSC9Q06265 439 aaKnown RBP28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 MCM10Q7L590 875 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 IFT57Q9NWB7 429 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 PRDM11Q9NQV5 511 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 CSB-PGBD3P0DP91 1061 aa28.09■■■□□ 2.09
TOP1MT-201ENST00000329245 BCAR3O75815 825 aa28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 CFAP44Q96MT7 982 aa28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 PPP4R2Q9NY27 417 aa28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 NLRP2Q9NX02 1062 aa28.07■■■□□ 2.08
TOP1MT-201ENST00000329245 RGPD5Q99666 1765 aa28.07■■■□□ 2.08
TOP1MT-201ENST00000329245 RGPD2P0DJD1 1756 aa28.06■■■□□ 2.08
TOP1MT-201ENST00000329245 CT47B1P0C2W7 299 aaPredicted RBP28.06■■■□□ 2.08
TOP1MT-201ENST00000329245 ZNF853P0CG23 659 aa28.06■■■□□ 2.08
TOP1MT-201ENST00000329245 GNAT3A8MTJ3 354 aa28.05■■■□□ 2.08
TOP1MT-201ENST00000329245 PIP4K2BP78356 416 aa28.05■■■□□ 2.08
TOP1MT-201ENST00000329245 COL18A1P39060 1754 aa28.05■■■□□ 2.08
TOP1MT-201ENST00000329245 RARSP54136 660 aaKnown RBP28.04■■■□□ 2.08
TOP1MT-201ENST00000329245 ABCC6O95255 1503 aa28.04■■■□□ 2.08
TOP1MT-201ENST00000329245 HTATSF1O43719 755 aaKnown RBP28.04■■■□□ 2.08
TOP1MT-201ENST00000329245 MBIPQ9NS73 344 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms