RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 HOXC9P31274 260 aa28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 GCP02774 474 aa28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 TMPOP42166 694 aaKnown RBP28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 CCDC27Q2M243 656 aa28.46■■■□□ 2.15
TOP1MT-201ENST00000329245 SLFN5Q08AF3 891 aa28.45■■■□□ 2.14
TOP1MT-201ENST00000329245 ZBTB7CA1YPR0 619 aa28.43■■■□□ 2.14
TOP1MT-201ENST00000329245 SULT6B1Q6IMI4 303 aa28.43■■■□□ 2.14
TOP1MT-201ENST00000329245 PHF23Q9BUL5 403 aaPredicted RBP28.43■■■□□ 2.14
TOP1MT-201ENST00000329245 E9PSI1 815 aa28.42■■■□□ 2.14
TOP1MT-201ENST00000329245 RIPK4P57078 832 aa28.42■■■□□ 2.14
TOP1MT-201ENST00000329245 DUSP27Q5VZP5 1158 aa28.42■■■□□ 2.14
TOP1MT-201ENST00000329245 PHACTR3Q96KR7 559 aa28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 SPINK5Q9NQ38 1064 aaPredicted RBP28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 USP19O94966 1318 aa28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 NFAT5O94916 1531 aa28.41■■■□□ 2.14
TOP1MT-201ENST00000329245 WDR63Q8IWG1 891 aa28.4■■■□□ 2.14
TOP1MT-201ENST00000329245 RTL1A6NKG5 1358 aa28.4■■■□□ 2.14
TOP1MT-201ENST00000329245 IP6K1Q92551 441 aa28.39■■■□□ 2.14
TOP1MT-201ENST00000329245 PXDNQ92626 1479 aa28.39■■■□□ 2.13
TOP1MT-201ENST00000329245 AEBP1Q8IUX7 1158 aa28.39■■■□□ 2.13
TOP1MT-201ENST00000329245 RCAN3Q9UKA8 241 aa28.39■■■□□ 2.13
TOP1MT-201ENST00000329245 SLIT3O75094 1523 aa28.38■■■□□ 2.13
TOP1MT-201ENST00000329245 TRMT2AQ8IZ69 625 aaKnown RBP28.38■■■□□ 2.13
TOP1MT-201ENST00000329245 LTV1Q96GA3 475 aaPredicted RBP28.38■■■□□ 2.13
TOP1MT-201ENST00000329245 ALS2Q96Q42 1657 aa28.37■■■□□ 2.13
TOP1MT-201ENST00000329245 TNS3Q68CZ2 1445 aa28.37■■■□□ 2.13
TOP1MT-201ENST00000329245 SPATA31A3Q5VYP0 1347 aa28.37■■■□□ 2.13
TOP1MT-201ENST00000329245 IRX6P78412 446 aaPredicted RBP28.36■■■□□ 2.13
TOP1MT-201ENST00000329245 EYA1Q99502 592 aa28.36■■■□□ 2.13
TOP1MT-201ENST00000329245 TRIM35Q9UPQ4 493 aa28.36■■■□□ 2.13
TOP1MT-201ENST00000329245 NFE2L2Q16236 605 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 ARHGEF25Q86VW2 580 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 ARHGEF10O15013 1369 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 LTN1O94822 1766 aa28.35■■■□□ 2.13
TOP1MT-201ENST00000329245 SOS2Q07890 1332 aaPredicted RBP28.32■■■□□ 2.12
TOP1MT-201ENST00000329245 IGSF1Q8N6C5 1336 aa28.32■■■□□ 2.12
TOP1MT-201ENST00000329245 ZC3H6P61129 1189 aaKnown RBP28.31■■■□□ 2.12
TOP1MT-201ENST00000329245 RGPD1P0DJD0 1748 aa28.31■■■□□ 2.12
TOP1MT-201ENST00000329245 LTBP4Q8N2S1 1624 aa28.3■■■□□ 2.12
TOP1MT-201ENST00000329245 RNF123Q5XPI4 1314 aa28.3■■■□□ 2.12
TOP1MT-201ENST00000329245 CABLES1Q8TDN4 633 aa28.3■■■□□ 2.12
TOP1MT-201ENST00000329245 MED1Q15648 1581 aaPredicted RBP28.29■■■□□ 2.12
TOP1MT-201ENST00000329245 MYH16Q9H6N6 1097 aa28.28■■■□□ 2.12
TOP1MT-201ENST00000329245 KDRP35968 1356 aa28.26■■■□□ 2.11
TOP1MT-201ENST00000329245 LMOD3Q0VAK6 560 aa28.25■■■□□ 2.11
TOP1MT-201ENST00000329245 PHRF1Q9P1Y6 1649 aaKnown RBP28.25■■■□□ 2.11
TOP1MT-201ENST00000329245 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
TOP1MT-201ENST00000329245 AXIN2Q9Y2T1 843 aa28.23■■■□□ 2.11
TOP1MT-201ENST00000329245 IL16Q14005 1332 aa28.23■■■□□ 2.11
TOP1MT-201ENST00000329245 RRP1P56182 461 aaKnown RBP28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 ERICH6BQ5W0A0 696 aa28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 USHBP1Q8N6Y0 703 aa28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 ANKRD24Q8TF21 1146 aa28.22■■■□□ 2.11
TOP1MT-201ENST00000329245 NBPF6Q5VWK0 638 aa28.21■■■□□ 2.11
TOP1MT-201ENST00000329245 NBPF4Q96M43 638 aa28.21■■■□□ 2.11
TOP1MT-201ENST00000329245 CALD1Q05682 793 aaKnown RBP28.2■■■□□ 2.11
TOP1MT-201ENST00000329245 HAP1P54257 671 aaPredicted RBP28.19■■■□□ 2.1
TOP1MT-201ENST00000329245 LRRC59Q96AG4 307 aaKnown RBP28.19■■■□□ 2.1
TOP1MT-201ENST00000329245 THUMPD2Q9BTF0 503 aaKnown RBP28.19■■■□□ 2.1
TOP1MT-201ENST00000329245 MTHFSDQ2M296 383 aaKnown RBP28.18■■■□□ 2.1
TOP1MT-201ENST00000329245 TSR2Q969E8 191 aaKnown RBP28.18■■■□□ 2.1
TOP1MT-201ENST00000329245 FAM83GA6ND36 823 aa28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 LAS1LQ9Y4W2 734 aaKnown RBP28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 NHSL1Q5SYE7 1610 aa28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 FANCIQ9NVI1 1328 aa28.17■■■□□ 2.1
TOP1MT-201ENST00000329245 CHRNA2Q15822 529 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 GAS2L2Q8NHY3 880 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 KIAA0232Q92628 1395 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 DCTN1Q14203 1278 aa28.15■■■□□ 2.1
TOP1MT-201ENST00000329245 ERBB3P21860 1342 aa28.13■■■□□ 2.09
TOP1MT-201ENST00000329245 ROBO1Q9Y6N7 1651 aa28.13■■■□□ 2.09
TOP1MT-201ENST00000329245 CPDO75976 1380 aa28.12■■■□□ 2.09
TOP1MT-201ENST00000329245 DLG5Q8TDM6 1919 aa28.12■■■□□ 2.09
TOP1MT-201ENST00000329245 PLIN1O60240 522 aa28.12■■■□□ 2.09
TOP1MT-201ENST00000329245 RTF1Q92541 710 aaKnown RBP28.11■■■□□ 2.09
TOP1MT-201ENST00000329245 CRYBG1Q9Y4K1 1723 aa28.11■■■□□ 2.09
TOP1MT-201ENST00000329245 GNAI1P63096 354 aa28.11■■■□□ 2.09
TOP1MT-201ENST00000329245 TOM1O60784 492 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 EXOSC9Q06265 439 aaKnown RBP28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 MCM10Q7L590 875 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 IFT57Q9NWB7 429 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 PRDM11Q9NQV5 511 aa28.1■■■□□ 2.09
TOP1MT-201ENST00000329245 CSB-PGBD3P0DP91 1061 aa28.09■■■□□ 2.09
TOP1MT-201ENST00000329245 BCAR3O75815 825 aa28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 CFAP44Q96MT7 982 aa28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 PPP4R2Q9NY27 417 aa28.08■■■□□ 2.09
TOP1MT-201ENST00000329245 NLRP2Q9NX02 1062 aa28.07■■■□□ 2.08
TOP1MT-201ENST00000329245 RGPD5Q99666 1765 aa28.07■■■□□ 2.08
TOP1MT-201ENST00000329245 RGPD2P0DJD1 1756 aa28.06■■■□□ 2.08
TOP1MT-201ENST00000329245 CT47B1P0C2W7 299 aaPredicted RBP28.06■■■□□ 2.08
TOP1MT-201ENST00000329245 ZNF853P0CG23 659 aa28.06■■■□□ 2.08
TOP1MT-201ENST00000329245 GNAT3A8MTJ3 354 aa28.05■■■□□ 2.08
TOP1MT-201ENST00000329245 PIP4K2BP78356 416 aa28.05■■■□□ 2.08
TOP1MT-201ENST00000329245 COL18A1P39060 1754 aa28.05■■■□□ 2.08
TOP1MT-201ENST00000329245 RARSP54136 660 aaKnown RBP28.04■■■□□ 2.08
TOP1MT-201ENST00000329245 ABCC6O95255 1503 aa28.04■■■□□ 2.08
TOP1MT-201ENST00000329245 HTATSF1O43719 755 aaKnown RBP28.04■■■□□ 2.08
TOP1MT-201ENST00000329245 MBIPQ9NS73 344 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms