RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 TOPAZ1Q8N9V7 1692 aa15.38■□□□□ 0.05
SEC24A-201ENST00000322887 L1TD1Q5T7N2 865 aaKnown RBP15.38■□□□□ 0.05
SEC24A-201ENST00000322887 USP32Q8NFA0 1604 aa15.38■□□□□ 0.05
SEC24A-201ENST00000322887 NSD3Q9BZ95 1437 aa15.38■□□□□ 0.05
SEC24A-201ENST00000322887 FSD2A1L4K1 749 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 ATF3P18847 181 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 GAS2L3Q86XJ1 694 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 PMFBP1Q8TBY8 1022 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
SEC24A-201ENST00000322887 CABP2Q9NPB3 220 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 FTSJ3Q8IY81 847 aaKnown RBP15.37■□□□□ 0.05
SEC24A-201ENST00000322887 RBM33Q96EV2 1170 aaKnown RBP15.37■□□□□ 0.05
SEC24A-201ENST00000322887 MST1RQ04912 1400 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 U2AF1L5P0DN76 240 aaPredicted RBP15.37■□□□□ 0.05
SEC24A-201ENST00000322887 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEC24A-201ENST00000322887 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
SEC24A-201ENST00000322887 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
SEC24A-201ENST00000322887 PRR36Q9H6K5 1346 aa15.36■□□□□ 0.05
SEC24A-201ENST00000322887 CD2BP2O95400 341 aaKnown RBP15.36■□□□□ 0.05
SEC24A-201ENST00000322887 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
SEC24A-201ENST00000322887 PLEKHG3A1L390 1219 aa15.36■□□□□ 0.05
SEC24A-201ENST00000322887 EXOSC9Q06265 439 aaKnown RBP15.35■□□□□ 0.05
SEC24A-201ENST00000322887 MVPQ14764 893 aaKnown RBP15.35■□□□□ 0.05
SEC24A-201ENST00000322887 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
SEC24A-201ENST00000322887 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
SEC24A-201ENST00000322887 C1orf167Q5SNV9 1468 aa15.35■□□□□ 0.05
SEC24A-201ENST00000322887 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
SEC24A-201ENST00000322887 TRIM27P14373 513 aa15.34■□□□□ 0.05
SEC24A-201ENST00000322887 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
SEC24A-201ENST00000322887 C1orf115Q9H7X2 142 aa15.34■□□□□ 0.05
SEC24A-201ENST00000322887 PPIP5K1Q6PFW1 1433 aa15.33■□□□□ 0.05
SEC24A-201ENST00000322887 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.05
SEC24A-201ENST00000322887 POLR3AO14802 1390 aaPredicted RBP15.33■□□□□ 0.04
SEC24A-201ENST00000322887 U2SURPO15042 1029 aaKnown RBP15.33■□□□□ 0.04
SEC24A-201ENST00000322887 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
SEC24A-201ENST00000322887 ANKRD36BQ8N2N9 1353 aa15.32■□□□□ 0.04
SEC24A-201ENST00000322887 DZIP1LQ8IYY4 767 aaKnown RBP15.32■□□□□ 0.04
SEC24A-201ENST00000322887 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
SEC24A-201ENST00000322887 CPSF1Q10570 1443 aaKnown RBP15.32■□□□□ 0.04
SEC24A-201ENST00000322887 FBLN1P23142 703 aa15.32■□□□□ 0.04
SEC24A-201ENST00000322887 KIF1AQ12756 1690 aa15.32■□□□□ 0.04
SEC24A-201ENST00000322887 SHPRHQ149N8 1683 aa15.31■□□□□ 0.04
SEC24A-201ENST00000322887 GRPEL1Q9HAV7 217 aa15.31■□□□□ 0.04
SEC24A-201ENST00000322887 CHMP5Q9NZZ3 219 aa15.31■□□□□ 0.04
SEC24A-201ENST00000322887 TERF2IPQ9NYB0 399 aa15.31■□□□□ 0.04
SEC24A-201ENST00000322887 NOB1Q9ULX3 412 aaKnown RBP15.31■□□□□ 0.04
SEC24A-201ENST00000322887 CD163L1Q9NR16 1453 aa15.31■□□□□ 0.04
SEC24A-201ENST00000322887 TMEM57Q8N5G2 664 aa15.3■□□□□ 0.04
SEC24A-201ENST00000322887 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
SEC24A-201ENST00000322887 TNPO1Q92973 898 aaKnown RBP15.3■□□□□ 0.04
SEC24A-201ENST00000322887 CABP1Q9NZU7 370 aa15.3■□□□□ 0.04
SEC24A-201ENST00000322887 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
SEC24A-201ENST00000322887 ZKSCAN2Q63HK3 967 aa15.3■□□□□ 0.04
SEC24A-201ENST00000322887 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
SEC24A-201ENST00000322887 HSCBQ8IWL3 235 aa15.29■□□□□ 0.04
SEC24A-201ENST00000322887 PHF8Q9UPP1 1060 aa15.29■□□□□ 0.04
SEC24A-201ENST00000322887 CLCN1P35523 988 aa15.28■□□□□ 0.04
SEC24A-201ENST00000322887 HDGFL2Q7Z4V5 671 aaPredicted RBP15.28■□□□□ 0.04
SEC24A-201ENST00000322887 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
SEC24A-201ENST00000322887 A0A1W2PP64 1363 aa15.27■□□□□ 0.04
SEC24A-201ENST00000322887 RGPD8O14715 1765 aaPredicted RBP15.27■□□□□ 0.04
SEC24A-201ENST00000322887 CHAMP1Q96JM3 812 aa15.27■□□□□ 0.04
SEC24A-201ENST00000322887 AKAP12Q02952 1782 aa15.27■□□□□ 0.03
SEC24A-201ENST00000322887 TOM1O60784 492 aa15.27■□□□□ 0.03
SEC24A-201ENST00000322887 ESCO1Q5FWF5 840 aa15.27■□□□□ 0.03
SEC24A-201ENST00000322887 GGNBP2Q9H3C7 697 aa15.27■□□□□ 0.03
SEC24A-201ENST00000322887 MYH16Q9H6N6 1097 aa15.27■□□□□ 0.03
SEC24A-201ENST00000322887 ACEP12821 1306 aa15.26■□□□□ 0.03
SEC24A-201ENST00000322887 MON2Q7Z3U7 1717 aa15.26■□□□□ 0.03
SEC24A-201ENST00000322887 ELL2O00472 640 aaPredicted RBP15.26■□□□□ 0.03
SEC24A-201ENST00000322887 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
SEC24A-201ENST00000322887 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
SEC24A-201ENST00000322887 ESPNB1AK53 854 aa15.25■□□□□ 0.03
SEC24A-201ENST00000322887 USP6P35125 1406 aa15.25■□□□□ 0.03
SEC24A-201ENST00000322887 EDC4Q6P2E9 1401 aaKnown RBP15.25■□□□□ 0.03
SEC24A-201ENST00000322887 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
SEC24A-201ENST00000322887 ORAI2Q96SN7 254 aa15.25■□□□□ 0.03
SEC24A-201ENST00000322887 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
SEC24A-201ENST00000322887 AK9Q5TCS8 1911 aa15.24■□□□□ 0.03
SEC24A-201ENST00000322887 HSP90AA1P07900 732 aaKnown RBP15.24■□□□□ 0.03
SEC24A-201ENST00000322887 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
SEC24A-201ENST00000322887 SSFA2P28290 1259 aa15.24■□□□□ 0.03
SEC24A-201ENST00000322887 BRINP3Q76B58 766 aa15.24■□□□□ 0.03
SEC24A-201ENST00000322887 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
SEC24A-201ENST00000322887 ZMYND15Q9H091 742 aa15.24■□□□□ 0.03
SEC24A-201ENST00000322887 MRE11P49959 708 aa15.24■□□□□ 0.03
SEC24A-201ENST00000322887 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
SEC24A-201ENST00000322887 ARID3AQ99856 593 aa15.23■□□□□ 0.03
SEC24A-201ENST00000322887 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
SEC24A-201ENST00000322887 NGDNQ8NEJ9 315 aaKnown RBP15.23■□□□□ 0.03
SEC24A-201ENST00000322887 PKNOX2Q96KN3 472 aa15.23■□□□□ 0.03
SEC24A-201ENST00000322887 KIF2CQ99661 725 aa15.23■□□□□ 0.03
SEC24A-201ENST00000322887 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
SEC24A-201ENST00000322887 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
SEC24A-201ENST00000322887 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
SEC24A-201ENST00000322887 NSD2O96028 1365 aa15.22■□□□□ 0.03
SEC24A-201ENST00000322887 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
SEC24A-201ENST00000322887 ANKRD45Q5TZF3 282 aa15.21■□□□□ 0.03
SEC24A-201ENST00000322887 DDIT3P35638 169 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms