RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
CSNK1D-202ENST00000314028 AMPHP49418 695 aa17.48■□□□□ 0.39
CSNK1D-202ENST00000314028 PKP1Q13835 747 aa17.48■□□□□ 0.39
CSNK1D-202ENST00000314028 SYAP1Q96A49 352 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-202ENST00000314028 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
CSNK1D-202ENST00000314028 NPC1L1Q9UHC9 1359 aa17.48■□□□□ 0.39
CSNK1D-202ENST00000314028 PTPRTO14522 1441 aa17.47■□□□□ 0.39
CSNK1D-202ENST00000314028 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
CSNK1D-202ENST00000314028 ADGRL1O94910 1474 aa17.47■□□□□ 0.39
CSNK1D-202ENST00000314028 RRP9O43818 475 aaKnown RBP17.46■□□□□ 0.39
CSNK1D-202ENST00000314028 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.39
CSNK1D-202ENST00000314028 ERVK-7P63135 1459 aa17.46■□□□□ 0.39
CSNK1D-202ENST00000314028 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
CSNK1D-202ENST00000314028 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
CSNK1D-202ENST00000314028 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
CSNK1D-202ENST00000314028 FIBPO43427 364 aa17.45■□□□□ 0.38
CSNK1D-202ENST00000314028 VAMP4O75379 141 aa17.45■□□□□ 0.38
CSNK1D-202ENST00000314028 FGD1P98174 961 aa17.45■□□□□ 0.38
CSNK1D-202ENST00000314028 FANCAO15360 1455 aa17.45■□□□□ 0.38
CSNK1D-202ENST00000314028 MEIS3Q99687 375 aa17.45■□□□□ 0.38
CSNK1D-202ENST00000314028 PRIM1P49642 420 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-202ENST00000314028 UQCRHLA0A096LP55 91 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 VPS37CA5D8V6 355 aaPredicted RBP17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 UQCRHP07919 91 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 SDSP20132 328 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 MAST1Q9Y2H9 1570 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 ERC2O15083 957 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 ZSCAN23Q3MJ62 389 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 ATP10AO60312 1499 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 NGDNQ8NEJ9 315 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-202ENST00000314028 ANKRD36BQ8N2N9 1353 aa17.43■□□□□ 0.38
CSNK1D-202ENST00000314028 FSD2A1L4K1 749 aa17.43■□□□□ 0.38
CSNK1D-202ENST00000314028 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-202ENST00000314028 KLHL40Q2TBA0 621 aa17.43■□□□□ 0.38
CSNK1D-202ENST00000314028 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-202ENST00000314028 SNX21Q969T3 373 aa17.42■□□□□ 0.38
CSNK1D-202ENST00000314028 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
CSNK1D-202ENST00000314028 PRDM10Q9NQV6 1147 aa17.42■□□□□ 0.38
CSNK1D-202ENST00000314028 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
CSNK1D-202ENST00000314028 ADCY10Q96PN6 1610 aa17.42■□□□□ 0.38
CSNK1D-202ENST00000314028 TPM2P07951 284 aa17.42■□□□□ 0.38
CSNK1D-202ENST00000314028 ZNF830Q96NB3 372 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-202ENST00000314028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.41■□□□□ 0.381e-15■□□□□ 9.2
CSNK1D-202ENST00000314028 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-202ENST00000314028 SPC24Q8NBT2 197 aa17.41■□□□□ 0.38
CSNK1D-202ENST00000314028 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
CSNK1D-202ENST00000314028 TTC22Q5TAA0 569 aa17.4■□□□□ 0.38
CSNK1D-202ENST00000314028 PLEKHM2Q8IWE5 1019 aa17.4■□□□□ 0.38
CSNK1D-202ENST00000314028 SURF6O75683 361 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-202ENST00000314028 ABCA8O94911 1581 aa17.4■□□□□ 0.38
CSNK1D-202ENST00000314028 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
CSNK1D-202ENST00000314028 NUTM1Q86Y26 1132 aa17.39■□□□□ 0.37
CSNK1D-202ENST00000314028 ABCC2Q92887 1545 aa17.39■□□□□ 0.37
CSNK1D-202ENST00000314028 FOSBP53539 338 aa17.38■□□□□ 0.37
CSNK1D-202ENST00000314028 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
CSNK1D-202ENST00000314028 IFT57Q9NWB7 429 aa17.38■□□□□ 0.37
CSNK1D-202ENST00000314028 CROCC2H7BZ55 1655 aa17.38■□□□□ 0.37
CSNK1D-202ENST00000314028 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
CSNK1D-202ENST00000314028 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-202ENST00000314028 PHF14O94880 888 aa17.36■□□□□ 0.37
CSNK1D-202ENST00000314028 FBXW7Q969H0 707 aa17.36■□□□□ 0.37
CSNK1D-202ENST00000314028 USP25Q9UHP3 1055 aa17.36■□□□□ 0.37
CSNK1D-202ENST00000314028 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
CSNK1D-202ENST00000314028 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-202ENST00000314028 SMC3Q9UQE7 1217 aa17.36■□□□□ 0.37
CSNK1D-202ENST00000314028 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 GNAI2P04899 355 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 DIAPH3Q9NSV4 1193 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 SYNMO15061 1565 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 RPAP2Q8IXW5 612 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 PLEKHF1Q96S99 279 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 RTEL1-TNFRSF6BF6WH68 1400 aa17.35■□□□□ 0.37
CSNK1D-202ENST00000314028 KDM5AP29375 1690 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-202ENST00000314028 MBD3O95983 291 aa17.34■□□□□ 0.37
CSNK1D-202ENST00000314028 TMX3Q96JJ7 454 aa17.34■□□□□ 0.37
CSNK1D-202ENST00000314028 IL16Q14005 1332 aa17.34■□□□□ 0.37
CSNK1D-202ENST00000314028 UBTFL1P0CB47 393 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-202ENST00000314028 SIRT2Q8IXJ6 389 aa17.33■□□□□ 0.37
CSNK1D-202ENST00000314028 ZNF592Q92610 1267 aa17.33■□□□□ 0.37
CSNK1D-202ENST00000314028 NUDT16Q96DE0 195 aaKnown RBP17.33■□□□□ 0.37
CSNK1D-202ENST00000314028 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-202ENST00000314028 FERMT3Q86UX7 667 aa17.33■□□□□ 0.36
CSNK1D-202ENST00000314028 USP26Q9BXU7 913 aa17.33■□□□□ 0.36
CSNK1D-202ENST00000314028 SLC52A1Q9NWF4 448 aa17.33■□□□□ 0.36
CSNK1D-202ENST00000314028 FOXO3O43524 673 aa17.32■□□□□ 0.36
CSNK1D-202ENST00000314028 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
CSNK1D-202ENST00000314028 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
CSNK1D-202ENST00000314028 DCTPP1Q9H773 170 aa17.31■□□□□ 0.36
CSNK1D-202ENST00000314028 MX1P20591 662 aa17.3■□□□□ 0.36
CSNK1D-202ENST00000314028 NSD2O96028 1365 aa17.3■□□□□ 0.36
CSNK1D-202ENST00000314028 TSC1Q92574 1164 aa17.3■□□□□ 0.36
CSNK1D-202ENST00000314028 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
CSNK1D-202ENST00000314028 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms