RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ADGRB2O60241 1585 aa13.19□□□□□ -0.3
APOBEC3F-201ENST00000308521 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
APOBEC3F-201ENST00000308521 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
APOBEC3F-201ENST00000308521 USP6P35125 1406 aa13.18□□□□□ -0.3
APOBEC3F-201ENST00000308521 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
APOBEC3F-201ENST00000308521 XPCQ01831 940 aaPredicted RBP13.18□□□□□ -0.3
APOBEC3F-201ENST00000308521 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
APOBEC3F-201ENST00000308521 RRP9O43818 475 aaKnown RBP13.17□□□□□ -0.3
APOBEC3F-201ENST00000308521 MAP2P11137 1827 aaKnown RBP13.17□□□□□ -0.3
APOBEC3F-201ENST00000308521 ORAI2Q96SN7 254 aa13.17□□□□□ -0.3
APOBEC3F-201ENST00000308521 NLRP6P59044 892 aa13.16□□□□□ -0.3
APOBEC3F-201ENST00000308521 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
APOBEC3F-201ENST00000308521 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
APOBEC3F-201ENST00000308521 ANKRD26Q9UPS8 1709 aa13.15□□□□□ -0.3
APOBEC3F-201ENST00000308521 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
APOBEC3F-201ENST00000308521 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
APOBEC3F-201ENST00000308521 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
APOBEC3F-201ENST00000308521 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
APOBEC3F-201ENST00000308521 PNPLA6Q8IY17 1366 aa13.15□□□□□ -0.3
APOBEC3F-201ENST00000308521 E9PSI1 815 aa13.15□□□□□ -0.31
APOBEC3F-201ENST00000308521 FOXO3O43524 673 aa13.15□□□□□ -0.31
APOBEC3F-201ENST00000308521 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.31
APOBEC3F-201ENST00000308521 ABTB2Q8N961 1025 aa13.15□□□□□ -0.31
APOBEC3F-201ENST00000308521 HSP90AB2PQ58FF8 381 aa13.14□□□□□ -0.31
APOBEC3F-201ENST00000308521 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
APOBEC3F-201ENST00000308521 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 IL13P35225 146 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 PSME1Q06323 249 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 PHACTR3Q96KR7 559 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 RGS3P49796 1198 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
APOBEC3F-201ENST00000308521 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
APOBEC3F-201ENST00000308521 FRAT2O75474 233 aaPredicted RBP13.12□□□□□ -0.31
APOBEC3F-201ENST00000308521 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
APOBEC3F-201ENST00000308521 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
APOBEC3F-201ENST00000308521 ADGRL3Q9HAR2 1447 aa13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 USP19O94966 1318 aa13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 RIPK4P57078 832 aa13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
APOBEC3F-201ENST00000308521 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
APOBEC3F-201ENST00000308521 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
APOBEC3F-201ENST00000308521 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
APOBEC3F-201ENST00000308521 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
APOBEC3F-201ENST00000308521 AAMPQ13685 434 aa13.1□□□□□ -0.31
APOBEC3F-201ENST00000308521 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
APOBEC3F-201ENST00000308521 BCAR3O75815 825 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 FCHSD2O94868 740 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 FMN2Q9NZ56 1722 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 IGHDP01880 384 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 TSR2Q969E8 191 aaKnown RBP13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 NRKQ7Z2Y5 1582 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 TMEM94Q12767 1356 aa13.09□□□□□ -0.31
APOBEC3F-201ENST00000308521 AMPHP49418 695 aa13.08□□□□□ -0.31
APOBEC3F-201ENST00000308521 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.31
APOBEC3F-201ENST00000308521 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.31
APOBEC3F-201ENST00000308521 IQSEC2Q5JU85 1478 aa13.08□□□□□ -0.32
APOBEC3F-201ENST00000308521 BECN1Q14457 450 aa13.08□□□□□ -0.32
APOBEC3F-201ENST00000308521 LTV1Q96GA3 475 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3F-201ENST00000308521 HSP90AA2PQ14568 343 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3F-201ENST00000308521 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
APOBEC3F-201ENST00000308521 ATF3P18847 181 aa13.06□□□□□ -0.32
APOBEC3F-201ENST00000308521 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
APOBEC3F-201ENST00000308521 BCL2L13Q9BXK5 485 aa13.06□□□□□ -0.32
APOBEC3F-201ENST00000308521 CDK12Q9NYV4 1490 aaPredicted RBP13.06□□□□□ -0.32
APOBEC3F-201ENST00000308521 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
APOBEC3F-201ENST00000308521 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
APOBEC3F-201ENST00000308521 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
APOBEC3F-201ENST00000308521 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3F-201ENST00000308521 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
APOBEC3F-201ENST00000308521 LRRC7Q96NW7 1537 aa13.05□□□□□ -0.32
APOBEC3F-201ENST00000308521 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
APOBEC3F-201ENST00000308521 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
APOBEC3F-201ENST00000308521 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
APOBEC3F-201ENST00000308521 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
APOBEC3F-201ENST00000308521 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
APOBEC3F-201ENST00000308521 PEAK1Q9H792 1746 aa13.03□□□□□ -0.32
APOBEC3F-201ENST00000308521 HSP90AA1P07900 732 aaKnown RBP13.02□□□□□ -0.32
APOBEC3F-201ENST00000308521 NFE2L2Q16236 605 aa13.02□□□□□ -0.32
APOBEC3F-201ENST00000308521 HOXC9P31274 260 aa13.02□□□□□ -0.33
APOBEC3F-201ENST00000308521 C1orf167Q5SNV9 1468 aa13.02□□□□□ -0.33
APOBEC3F-201ENST00000308521 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
APOBEC3F-201ENST00000308521 SEC24BO95487 1268 aa13.01□□□□□ -0.33
APOBEC3F-201ENST00000308521 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
APOBEC3F-201ENST00000308521 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
APOBEC3F-201ENST00000308521 EYA1Q99502 592 aa13.01□□□□□ -0.33
APOBEC3F-201ENST00000308521 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
APOBEC3F-201ENST00000308521 ANTXR1Q9H6X2 564 aa13.01□□□□□ -0.33
APOBEC3F-201ENST00000308521 SBNO1A3KN83 1393 aa13□□□□□ -0.33
APOBEC3F-201ENST00000308521 FLT4P35916 1363 aa13□□□□□ -0.33
APOBEC3F-201ENST00000308521 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
APOBEC3F-201ENST00000308521 COG6Q9Y2V7 657 aa13□□□□□ -0.33
APOBEC3F-201ENST00000308521 CANXP27824 592 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms