RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MRE11P49959 708 aa20.68■□□□□ 0.9
SSH3-201ENST00000308127 PUS7Q96PZ0 661 aaKnown RBP20.68■□□□□ 0.9
SSH3-201ENST00000308127 YTHDC2Q9H6S0 1430 aaKnown RBP20.67■□□□□ 0.9
SSH3-201ENST00000308127 SMARCA5O60264 1052 aaPredicted RBP20.67■□□□□ 0.9
SSH3-201ENST00000308127 GSPT1P15170 499 aaKnown RBP20.67■□□□□ 0.9
SSH3-201ENST00000308127 PTPRMP28827 1452 aa20.66■□□□□ 0.9
SSH3-201ENST00000308127 CHAMP1Q96JM3 812 aa20.66■□□□□ 0.9
SSH3-201ENST00000308127 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
SSH3-201ENST00000308127 MLECQ14165 292 aa20.66■□□□□ 0.9
SSH3-201ENST00000308127 YEATS2Q9ULM3 1422 aa20.65■□□□□ 0.9
SSH3-201ENST00000308127 MYO5BQ9ULV0 1848 aa20.65■□□□□ 0.9
SSH3-201ENST00000308127 AK9Q5TCS8 1911 aa20.65■□□□□ 0.9
SSH3-201ENST00000308127 K7ELQ4 463 aaPredicted RBP20.64■□□□□ 0.9
SSH3-201ENST00000308127 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.9
SSH3-201ENST00000308127 NCBP3Q53F19 620 aaKnown RBP20.64■□□□□ 0.9
SSH3-201ENST00000308127 SNX21Q969T3 373 aa20.64■□□□□ 0.9
SSH3-201ENST00000308127 MLH3Q9UHC1 1453 aa20.64■□□□□ 0.89
SSH3-201ENST00000308127 NCLP19338 710 aaKnown RBP20.64■□□□□ 0.89
SSH3-201ENST00000308127 PIK3C2BO00750 1634 aa20.63■□□□□ 0.89
SSH3-201ENST00000308127 PKP1Q13835 747 aa20.63■□□□□ 0.89
SSH3-201ENST00000308127 AEBP1Q8IUX7 1158 aa20.63■□□□□ 0.89
SSH3-201ENST00000308127 GBP4Q96PP9 640 aa20.63■□□□□ 0.89
SSH3-201ENST00000308127 PNPLA6Q8IY17 1366 aa20.62■□□□□ 0.89
SSH3-201ENST00000308127 FOXD4L5Q5VV16 416 aaPredicted RBP20.62■□□□□ 0.89
SSH3-201ENST00000308127 FOXD4L4Q8WXT5 416 aaPredicted RBP20.62■□□□□ 0.89
SSH3-201ENST00000308127 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
SSH3-201ENST00000308127 NCOA3Q9Y6Q9 1424 aa20.62■□□□□ 0.89
SSH3-201ENST00000308127 SLC52A1Q9NWF4 448 aa20.62■□□□□ 0.89
SSH3-201ENST00000308127 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
SSH3-201ENST00000308127 GNAI1P63096 354 aa20.61■□□□□ 0.89
SSH3-201ENST00000308127 MIS18AQ9NYP9 233 aa20.6■□□□□ 0.89
SSH3-201ENST00000308127 IL13P35225 146 aa20.6■□□□□ 0.89
SSH3-201ENST00000308127 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
SSH3-201ENST00000308127 PLEKHM2Q8IWE5 1019 aa20.6■□□□□ 0.89
SSH3-201ENST00000308127 MCM10Q7L590 875 aa20.59■□□□□ 0.89
SSH3-201ENST00000308127 TRIM44Q96DX7 344 aaPredicted RBP20.59■□□□□ 0.89
SSH3-201ENST00000308127 CDC45O75419 566 aa20.59■□□□□ 0.89
SSH3-201ENST00000308127 DDX49Q9Y6V7 483 aaKnown RBP20.59■□□□□ 0.89
SSH3-201ENST00000308127 ESPNB1AK53 854 aa20.58■□□□□ 0.89
SSH3-201ENST00000308127 CLCN1P35523 988 aa20.58■□□□□ 0.89
SSH3-201ENST00000308127 TSHZ3Q63HK5 1081 aa20.58■□□□□ 0.88
SSH3-201ENST00000308127 MCTP1Q6DN14 999 aa20.58■□□□□ 0.88
SSH3-201ENST00000308127 ABCC4O15439 1325 aa20.57■□□□□ 0.88
SSH3-201ENST00000308127 IFT57Q9NWB7 429 aa20.57■□□□□ 0.88
SSH3-201ENST00000308127 CFAP74Q9C0B2 1584 aa20.56■□□□□ 0.88
SSH3-201ENST00000308127 MED14O60244 1454 aa20.56■□□□□ 0.88
SSH3-201ENST00000308127 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
SSH3-201ENST00000308127 ZGPATQ8N5A5 531 aaKnown RBP20.55■□□□□ 0.88
SSH3-201ENST00000308127 ZNF853P0CG23 659 aa20.54■□□□□ 0.88
SSH3-201ENST00000308127 CFAP44Q96MT7 982 aa20.54■□□□□ 0.88
SSH3-201ENST00000308127 SULT6B1Q6IMI4 303 aa20.54■□□□□ 0.88
SSH3-201ENST00000308127 NOL8Q76FK4 1167 aaKnown RBP20.54■□□□□ 0.88
SSH3-201ENST00000308127 ARHGEF40Q8TER5 1519 aa20.53■□□□□ 0.88
SSH3-201ENST00000308127 MEIS3Q99687 375 aa20.53■□□□□ 0.88
SSH3-201ENST00000308127 CIZ1Q9ULV3 898 aaPredicted RBP20.53■□□□□ 0.88
SSH3-201ENST00000308127 CAVIN1Q6NZI2 390 aaKnown RBP20.53■□□□□ 0.88
SSH3-201ENST00000308127 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
SSH3-201ENST00000308127 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
SSH3-201ENST00000308127 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
SSH3-201ENST00000308127 UBE2Q2Q8WVN8 375 aa20.52■□□□□ 0.88
SSH3-201ENST00000308127 ARHGAP45Q92619 1136 aa20.52■□□□□ 0.88
SSH3-201ENST00000308127 COG3Q96JB2 828 aa20.52■□□□□ 0.88
SSH3-201ENST00000308127 F6X3S4 739 aa20.52■□□□□ 0.87
SSH3-201ENST00000308127 TTC22Q5TAA0 569 aa20.52■□□□□ 0.87
SSH3-201ENST00000308127 API5Q9BZZ5 524 aaKnown RBP20.52■□□□□ 0.87
SSH3-201ENST00000308127 ZFYVE9O95405 1425 aa20.51■□□□□ 0.87
SSH3-201ENST00000308127 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
SSH3-201ENST00000308127 SDSP20132 328 aa20.51■□□□□ 0.87
SSH3-201ENST00000308127 RBM27Q9P2N5 1060 aaKnown RBP20.51■□□□□ 0.87
SSH3-201ENST00000308127 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
SSH3-201ENST00000308127 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
SSH3-201ENST00000308127 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
SSH3-201ENST00000308127 NASPP49321 788 aaPredicted RBP20.5■□□□□ 0.87
SSH3-201ENST00000308127 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
SSH3-201ENST00000308127 CALD1Q05682 793 aaKnown RBP20.5■□□□□ 0.87
SSH3-201ENST00000308127 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
SSH3-201ENST00000308127 NECTIN2Q92692 538 aa20.49■□□□□ 0.87
SSH3-201ENST00000308127 DCTPP1Q9H773 170 aa20.49■□□□□ 0.87
SSH3-201ENST00000308127 RIMS2Q9UQ26 1411 aa20.49■□□□□ 0.87
SSH3-201ENST00000308127 NUDT16Q96DE0 195 aaKnown RBP20.49■□□□□ 0.87
SSH3-201ENST00000308127 GOLGA6L22H0YM25 854 aa20.48■□□□□ 0.87
SSH3-201ENST00000308127 FOXO3O43524 673 aa20.48■□□□□ 0.87
SSH3-201ENST00000308127 ZNF428Q96B54 188 aa20.48■□□□□ 0.87
SSH3-201ENST00000308127 USP26Q9BXU7 913 aa20.48■□□□□ 0.87
SSH3-201ENST00000308127 MSH6P52701 1360 aa20.48■□□□□ 0.87
SSH3-201ENST00000308127 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
SSH3-201ENST00000308127 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
SSH3-201ENST00000308127 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
SSH3-201ENST00000308127 TMEM131LA2VDJ0 1609 aa20.47■□□□□ 0.87
SSH3-201ENST00000308127 PRPF40AO75400 957 aaKnown RBP20.47■□□□□ 0.87
SSH3-201ENST00000308127 G2E3Q7L622 706 aa20.47■□□□□ 0.87
SSH3-201ENST00000308127 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
SSH3-201ENST00000308127 KNDC1Q76NI1 1749 aa20.46■□□□□ 0.87
SSH3-201ENST00000308127 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
SSH3-201ENST00000308127 SKOR2Q2VWA4 1001 aaPredicted RBP20.46■□□□□ 0.87
SSH3-201ENST00000308127 CHMP4BQ9H444 224 aaKnown RBP20.46■□□□□ 0.87
SSH3-201ENST00000308127 KIF20BQ96Q89 1820 aa20.46■□□□□ 0.87
SSH3-201ENST00000308127 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
SSH3-201ENST00000308127 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
SSH3-201ENST00000308127 HSP90AB2PQ58FF8 381 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms