RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 SIRT1Q96EB6 747 aa23.76■■□□□ 1.39
RNF139-201ENST00000303545 ZNF692Q9BU19 519 aaPredicted RBP23.75■■□□□ 1.39
RNF139-201ENST00000303545 PTPRUQ92729 1446 aa23.75■■□□□ 1.39
RNF139-201ENST00000303545 TTC21BQ7Z4L5 1316 aa23.75■■□□□ 1.39
RNF139-201ENST00000303545 CDK12Q9NYV4 1490 aaPredicted RBP23.74■■□□□ 1.39
RNF139-201ENST00000303545 MBIPQ9NS73 344 aa23.74■■□□□ 1.39
RNF139-201ENST00000303545 AAMPQ13685 434 aa23.74■■□□□ 1.39
RNF139-201ENST00000303545 DDX19BQ9UMR2 479 aa23.74■■□□□ 1.39
RNF139-201ENST00000303545 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
RNF139-201ENST00000303545 AKAP12Q02952 1782 aa23.74■■□□□ 1.39
RNF139-201ENST00000303545 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
RNF139-201ENST00000303545 C3P01024 1663 aa23.73■■□□□ 1.39
RNF139-201ENST00000303545 AATKQ6ZMQ8 1374 aa23.73■■□□□ 1.39
RNF139-201ENST00000303545 PLEKHG1Q9ULL1 1385 aa23.72■■□□□ 1.39
RNF139-201ENST00000303545 USP19O94966 1318 aa23.72■■□□□ 1.39
RNF139-201ENST00000303545 SULT6B1Q6IMI4 303 aa23.72■■□□□ 1.39
RNF139-201ENST00000303545 EIF4A2Q14240 407 aaKnown RBP23.71■■□□□ 1.39
RNF139-201ENST00000303545 VAMP4O75379 141 aa23.71■■□□□ 1.39
RNF139-201ENST00000303545 KIF16BQ96L93 1317 aa23.71■■□□□ 1.39
RNF139-201ENST00000303545 HSP90AB2PQ58FF8 381 aa23.7■■□□□ 1.38
RNF139-201ENST00000303545 DLG5Q8TDM6 1919 aa23.7■■□□□ 1.38
RNF139-201ENST00000303545 IPO8O15397 1037 aaKnown RBP23.7■■□□□ 1.38
RNF139-201ENST00000303545 C8orf58Q8NAV2 365 aa23.69■■□□□ 1.38
RNF139-201ENST00000303545 C1orf115Q9H7X2 142 aa23.69■■□□□ 1.38
RNF139-201ENST00000303545 VIRMAQ69YN4 1812 aaKnown RBP23.69■■□□□ 1.38
RNF139-201ENST00000303545 GNAI1P63096 354 aa23.68■■□□□ 1.38
RNF139-201ENST00000303545 ALDH1L2Q3SY69 923 aa23.68■■□□□ 1.38
RNF139-201ENST00000303545 ZBTB40Q9NUA8 1239 aa23.68■■□□□ 1.38
RNF139-201ENST00000303545 IFT57Q9NWB7 429 aa23.67■■□□□ 1.38
RNF139-201ENST00000303545 MRPL50Q8N5N7 158 aaKnown RBP23.66■■□□□ 1.38
RNF139-201ENST00000303545 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
RNF139-201ENST00000303545 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
RNF139-201ENST00000303545 MCM10Q7L590 875 aa23.65■■□□□ 1.38
RNF139-201ENST00000303545 PLEKHG3A1L390 1219 aa23.64■■□□□ 1.38
RNF139-201ENST00000303545 ZNF853P0CG23 659 aa23.64■■□□□ 1.38
RNF139-201ENST00000303545 CALD1Q05682 793 aaKnown RBP23.64■■□□□ 1.38
RNF139-201ENST00000303545 USP6P35125 1406 aa23.64■■□□□ 1.38
RNF139-201ENST00000303545 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
RNF139-201ENST00000303545 NUTM2GQ5VZR2 741 aa23.64■■□□□ 1.37
RNF139-201ENST00000303545 NGDNQ8NEJ9 315 aaKnown RBP23.63■■□□□ 1.37
RNF139-201ENST00000303545 HDAC1Q13547 482 aaPredicted RBP23.63■■□□□ 1.37
RNF139-201ENST00000303545 CFAP44Q96MT7 982 aa23.63■■□□□ 1.37
RNF139-201ENST00000303545 RGPD8O14715 1765 aaPredicted RBP23.61■■□□□ 1.37
RNF139-201ENST00000303545 RBM33Q96EV2 1170 aaKnown RBP23.61■■□□□ 1.37
RNF139-201ENST00000303545 OVOS2A0A0J9YW53 1432 aa23.6■■□□□ 1.37
RNF139-201ENST00000303545 OVOS2Q6IE36 1432 aa23.6■■□□□ 1.37
RNF139-201ENST00000303545 LMOD3Q0VAK6 560 aa23.6■■□□□ 1.37
RNF139-201ENST00000303545 NRKQ7Z2Y5 1582 aa23.6■■□□□ 1.37
RNF139-201ENST00000303545 LNPKQ9C0E8 428 aa23.6■■□□□ 1.37
RNF139-201ENST00000303545 TOPAZ1Q8N9V7 1692 aa23.6■■□□□ 1.37
RNF139-201ENST00000303545 PEAK1Q9H792 1746 aa23.59■■□□□ 1.37
RNF139-201ENST00000303545 MIS18AQ9NYP9 233 aa23.59■■□□□ 1.37
RNF139-201ENST00000303545 FOXO3O43524 673 aa23.58■■□□□ 1.37
RNF139-201ENST00000303545 MAP3K19Q56UN5 1328 aa23.57■■□□□ 1.36
RNF139-201ENST00000303545 ZBTB7BO15156 539 aaPredicted RBP23.57■■□□□ 1.36
RNF139-201ENST00000303545 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
RNF139-201ENST00000303545 FER1L4A9Z1Z3 1794 aa23.57■■□□□ 1.36
RNF139-201ENST00000303545 SMC5Q8IY18 1101 aa23.57■■□□□ 1.36
RNF139-201ENST00000303545 TBX22Q9Y458 520 aa23.57■■□□□ 1.36
RNF139-201ENST00000303545 KCNA6P17658 529 aa23.56■■□□□ 1.36
RNF139-201ENST00000303545 NFKBIBQ15653 356 aa23.56■■□□□ 1.36
RNF139-201ENST00000303545 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
RNF139-201ENST00000303545 ZNF428Q96B54 188 aa23.55■■□□□ 1.36
RNF139-201ENST00000303545 UPF2Q9HAU5 1272 aaKnown RBP23.54■■□□□ 1.36
RNF139-201ENST00000303545 BRPF1P55201 1214 aaPredicted RBP23.53■■□□□ 1.36
RNF139-201ENST00000303545 RIMS1Q86UR5 1692 aaKnown RBP23.53■■□□□ 1.36
RNF139-201ENST00000303545 AMPHP49418 695 aa23.53■■□□□ 1.36
RNF139-201ENST00000303545 SLIT1O75093 1534 aa23.52■■□□□ 1.36
RNF139-201ENST00000303545 NLRP6P59044 892 aa23.52■■□□□ 1.36
RNF139-201ENST00000303545 ANKRD45Q5TZF3 282 aa23.52■■□□□ 1.36
RNF139-201ENST00000303545 SLKQ9H2G2 1235 aaPredicted RBP23.52■■□□□ 1.36
RNF139-201ENST00000303545 DIP2AQ14689 1571 aa23.52■■□□□ 1.36
RNF139-201ENST00000303545 ARHGAP23Q9P227 1491 aa23.52■■□□□ 1.36
RNF139-201ENST00000303545 C14orf37Q86TY3 774 aa23.51■■□□□ 1.35
RNF139-201ENST00000303545 TBC1D32Q96NH3 1257 aa23.51■■□□□ 1.35
RNF139-201ENST00000303545 NUCB1Q02818 461 aa23.51■■□□□ 1.35
RNF139-201ENST00000303545 PTCH1Q13635 1447 aa23.51■■□□□ 1.35
RNF139-201ENST00000303545 SSH2Q76I76 1423 aa23.51■■□□□ 1.35
RNF139-201ENST00000303545 MTHFSDQ2M296 383 aaKnown RBP23.5■■□□□ 1.35
RNF139-201ENST00000303545 SIRT2Q8IXJ6 389 aa23.5■■□□□ 1.35
RNF139-201ENST00000303545 SPRYD3Q8NCJ5 442 aa23.5■■□□□ 1.35
RNF139-201ENST00000303545 ARHGAP45Q92619 1136 aa23.5■■□□□ 1.35
RNF139-201ENST00000303545 USP31Q70CQ4 1352 aa23.5■■□□□ 1.35
RNF139-201ENST00000303545 ABCC4O15439 1325 aa23.5■■□□□ 1.35
RNF139-201ENST00000303545 CHD1LQ86WJ1 897 aa23.49■■□□□ 1.35
RNF139-201ENST00000303545 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
RNF139-201ENST00000303545 PLEKHG5O94827 1062 aa23.49■■□□□ 1.35
RNF139-201ENST00000303545 NALCNQ8IZF0 1738 aa23.48■■□□□ 1.35
RNF139-201ENST00000303545 FRAT2O75474 233 aaPredicted RBP23.47■■□□□ 1.35
RNF139-201ENST00000303545 EYA1Q99502 592 aa23.47■■□□□ 1.35
RNF139-201ENST00000303545 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
RNF139-201ENST00000303545 CHL1O00533 1208 aa23.46■■□□□ 1.35
RNF139-201ENST00000303545 USP35Q9P2H5 1018 aa23.46■■□□□ 1.35
RNF139-201ENST00000303545 BECN1Q14457 450 aa23.45■■□□□ 1.34
RNF139-201ENST00000303545 API5Q9BZZ5 524 aaKnown RBP23.45■■□□□ 1.34
RNF139-201ENST00000303545 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
RNF139-201ENST00000303545 FLT4P35916 1363 aa23.44■■□□□ 1.34
RNF139-201ENST00000303545 ABTB2Q8N961 1025 aa23.44■■□□□ 1.34
RNF139-201ENST00000303545 C22orf23Q9BZE7 217 aa23.44■■□□□ 1.34
RNF139-201ENST00000303545 RTF1Q92541 710 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms