RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.73
UBAP1-201ENST00000297661 ALKQ9UM73 1620 aa19.64■□□□□ 0.73
UBAP1-201ENST00000297661 AMOTL2Q9Y2J4 779 aa19.63■□□□□ 0.73
UBAP1-201ENST00000297661 MCM4P33991 863 aa19.63■□□□□ 0.73
UBAP1-201ENST00000297661 SPRYD3Q8NCJ5 442 aa19.63■□□□□ 0.73
UBAP1-201ENST00000297661 DIAPH1O60610 1272 aaKnown RBP19.62■□□□□ 0.73
UBAP1-201ENST00000297661 YTHDC2Q9H6S0 1430 aaKnown RBP19.62■□□□□ 0.73
UBAP1-201ENST00000297661 THUMPD2Q9BTF0 503 aaKnown RBP19.61■□□□□ 0.73
UBAP1-201ENST00000297661 PTPRUQ92729 1446 aa19.61■□□□□ 0.73
UBAP1-201ENST00000297661 MED14O60244 1454 aa19.61■□□□□ 0.73
UBAP1-201ENST00000297661 CD163L1Q9NR16 1453 aa19.61■□□□□ 0.73
UBAP1-201ENST00000297661 UPF2Q9HAU5 1272 aaKnown RBP19.6■□□□□ 0.73
UBAP1-201ENST00000297661 TBX22Q9Y458 520 aa19.6■□□□□ 0.73
UBAP1-201ENST00000297661 HMOX1P09601 288 aa19.6■□□□□ 0.73
UBAP1-201ENST00000297661 HDGFL2Q7Z4V5 671 aaPredicted RBP19.6■□□□□ 0.73
UBAP1-201ENST00000297661 ADGRB2O60241 1585 aa19.6■□□□□ 0.73
UBAP1-201ENST00000297661 MRE11P49959 708 aa19.6■□□□□ 0.73
UBAP1-201ENST00000297661 TMEM57Q8N5G2 664 aa19.6■□□□□ 0.73
UBAP1-201ENST00000297661 COL3A1P02461 1466 aaPredicted RBP19.59■□□□□ 0.73
UBAP1-201ENST00000297661 TBC1D32Q96NH3 1257 aa19.59■□□□□ 0.73
UBAP1-201ENST00000297661 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
UBAP1-201ENST00000297661 ATF7IPQ6VMQ6 1270 aa19.59■□□□□ 0.73
UBAP1-201ENST00000297661 ESPNB1AK53 854 aa19.58■□□□□ 0.72
UBAP1-201ENST00000297661 TRAK2O60296 914 aa19.58■□□□□ 0.72
UBAP1-201ENST00000297661 PRKAR2BP31323 418 aa19.57■□□□□ 0.72
UBAP1-201ENST00000297661 ERBB4Q15303 1308 aa19.56■□□□□ 0.72
UBAP1-201ENST00000297661 MFAP1P55081 439 aaKnown RBP19.56■□□□□ 0.72
UBAP1-201ENST00000297661 ZRANB1Q9UGI0 708 aa19.56■□□□□ 0.72
UBAP1-201ENST00000297661 ELL2O00472 640 aaPredicted RBP19.55■□□□□ 0.72
UBAP1-201ENST00000297661 AAMPQ13685 434 aa19.55■□□□□ 0.72
UBAP1-201ENST00000297661 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
UBAP1-201ENST00000297661 GRPEL1Q9HAV7 217 aa19.54■□□□□ 0.72
UBAP1-201ENST00000297661 STRCP1A6NGW2 1772 aa19.54■□□□□ 0.72
UBAP1-201ENST00000297661 SETD1AO15047 1707 aaKnown RBP19.54■□□□□ 0.72
UBAP1-201ENST00000297661 NUTM2FA1L443 756 aa19.54■□□□□ 0.72
UBAP1-201ENST00000297661 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
UBAP1-201ENST00000297661 PROSER2Q86WR7 435 aaPredicted RBP19.54■□□□□ 0.72
UBAP1-201ENST00000297661 ROBO2Q9HCK4 1378 aa19.54■□□□□ 0.72
UBAP1-201ENST00000297661 POLKQ9UBT6 870 aa19.53■□□□□ 0.72
UBAP1-201ENST00000297661 EMILIN1Q9Y6C2 1016 aa19.53■□□□□ 0.72
UBAP1-201ENST00000297661 DDX19BQ9UMR2 479 aa19.53■□□□□ 0.72
UBAP1-201ENST00000297661 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.71
UBAP1-201ENST00000297661 CT47B1P0C2W7 299 aaPredicted RBP19.51■□□□□ 0.71
UBAP1-201ENST00000297661 CHMP5Q9NZZ3 219 aa19.51■□□□□ 0.71
UBAP1-201ENST00000297661 NME9Q86XW9 330 aa19.51■□□□□ 0.71
UBAP1-201ENST00000297661 LNPKQ9C0E8 428 aa19.5■□□□□ 0.71
UBAP1-201ENST00000297661 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
UBAP1-201ENST00000297661 TSPYL6Q8N831 410 aa19.5■□□□□ 0.71
UBAP1-201ENST00000297661 ZBTB40Q9NUA8 1239 aa19.49■□□□□ 0.71
UBAP1-201ENST00000297661 HDAC1Q13547 482 aaPredicted RBP19.48■□□□□ 0.71
UBAP1-201ENST00000297661 TRIM44Q96DX7 344 aaPredicted RBP19.48■□□□□ 0.71
UBAP1-201ENST00000297661 FCHSD2O94868 740 aa19.48■□□□□ 0.71
UBAP1-201ENST00000297661 TPM2P07951 284 aa19.48■□□□□ 0.71
UBAP1-201ENST00000297661 LRRC7Q96NW7 1537 aa19.48■□□□□ 0.71
UBAP1-201ENST00000297661 PNPLA6Q8IY17 1366 aa19.48■□□□□ 0.71
UBAP1-201ENST00000297661 RRS1Q15050 365 aaKnown RBP19.47■□□□□ 0.71
UBAP1-201ENST00000297661 C22orf23Q9BZE7 217 aa19.47■□□□□ 0.71
UBAP1-201ENST00000297661 IL16Q14005 1332 aa19.47■□□□□ 0.71
UBAP1-201ENST00000297661 CHD2O14647 1828 aaKnown RBP19.47■□□□□ 0.71
UBAP1-201ENST00000297661 TMEM94Q12767 1356 aa19.46■□□□□ 0.71
UBAP1-201ENST00000297661 PDCL3Q9H2J4 239 aa19.46■□□□□ 0.71
UBAP1-201ENST00000297661 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
UBAP1-201ENST00000297661 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
UBAP1-201ENST00000297661 KIF16BQ96L93 1317 aa19.45■□□□□ 0.7
UBAP1-201ENST00000297661 FAM83GA6ND36 823 aa19.45■□□□□ 0.7
UBAP1-201ENST00000297661 DDX11L8A8MPP1 907 aa19.45■□□□□ 0.7
UBAP1-201ENST00000297661 SMC5Q8IY18 1101 aa19.45■□□□□ 0.7
UBAP1-201ENST00000297661 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
UBAP1-201ENST00000297661 DIP2AQ14689 1571 aa19.43■□□□□ 0.7
UBAP1-201ENST00000297661 ANKRD26Q9UPS8 1709 aa19.43■□□□□ 0.7
UBAP1-201ENST00000297661 NFE2L2Q16236 605 aa19.43■□□□□ 0.7
UBAP1-201ENST00000297661 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
UBAP1-201ENST00000297661 VAMP4O75379 141 aa19.41■□□□□ 0.7
UBAP1-201ENST00000297661 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
UBAP1-201ENST00000297661 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
UBAP1-201ENST00000297661 ANKRD45Q5TZF3 282 aa19.4■□□□□ 0.7
UBAP1-201ENST00000297661 IL13P35225 146 aa19.4■□□□□ 0.7
UBAP1-201ENST00000297661 GAS2L3Q86XJ1 694 aa19.4■□□□□ 0.7
UBAP1-201ENST00000297661 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
UBAP1-201ENST00000297661 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
UBAP1-201ENST00000297661 XRN1Q8IZH2 1706 aaKnown RBP19.39■□□□□ 0.7
UBAP1-201ENST00000297661 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.7
UBAP1-201ENST00000297661 NUCB1Q02818 461 aa19.39■□□□□ 0.7
UBAP1-201ENST00000297661 ALDH1L2Q3SY69 923 aa19.39■□□□□ 0.7
UBAP1-201ENST00000297661 KIAA1211Q6ZU35 1233 aa19.39■□□□□ 0.7
UBAP1-201ENST00000297661 MAP2P11137 1827 aaKnown RBP19.39■□□□□ 0.69
UBAP1-201ENST00000297661 CHD1LQ86WJ1 897 aa19.38■□□□□ 0.69
UBAP1-201ENST00000297661 MRPL50Q8N5N7 158 aaKnown RBP19.38■□□□□ 0.69
UBAP1-201ENST00000297661 C8orf58Q8NAV2 365 aa19.38■□□□□ 0.69
UBAP1-201ENST00000297661 ZNF692Q9BU19 519 aaPredicted RBP19.38■□□□□ 0.69
UBAP1-201ENST00000297661 LTBP4Q8N2S1 1624 aa19.38■□□□□ 0.69
UBAP1-201ENST00000297661 ZBTB7BO15156 539 aaPredicted RBP19.38■□□□□ 0.69
UBAP1-201ENST00000297661 NUDT16Q96DE0 195 aaKnown RBP19.38■□□□□ 0.69
UBAP1-201ENST00000297661 SOX12O15370 315 aa19.37■□□□□ 0.69
UBAP1-201ENST00000297661 HSCBQ8IWL3 235 aa19.36■□□□□ 0.69
UBAP1-201ENST00000297661 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
UBAP1-201ENST00000297661 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
UBAP1-201ENST00000297661 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.36■□□□□ 0.69
UBAP1-201ENST00000297661 PIP4K2BP78356 416 aa19.35■□□□□ 0.69
UBAP1-201ENST00000297661 AEBP1Q8IUX7 1158 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms