RNA–Protein interactions for RNA: ENST00000295896.12

C3orf49-201, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS P5 TSL 2 BASIC

Gene C3orf49, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-201ENST00000295896 EML3Q32P44 896 aa13.34□□□□□ -0.27
C3orf49-201ENST00000295896 LARP1Q6PKG0 1096 aaKnown RBP13.34□□□□□ -0.27
C3orf49-201ENST00000295896 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
C3orf49-201ENST00000295896 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L10C9JJH3 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L21D6R901 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 ERFEQ4G0M1 354 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 ZMIZ1Q9ULJ6 1067 aa13.33□□□□□ -0.28
C3orf49-201ENST00000295896 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
C3orf49-201ENST00000295896 SLC10A4Q96EP9 437 aa13.32□□□□□ -0.28
C3orf49-201ENST00000295896 CARNS1A5YM72 827 aa13.31□□□□□ -0.28
C3orf49-201ENST00000295896 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
C3orf49-201ENST00000295896 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
C3orf49-201ENST00000295896 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
C3orf49-201ENST00000295896 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
C3orf49-201ENST00000295896 FOXJ1Q92949 421 aa13.31□□□□□ -0.28
C3orf49-201ENST00000295896 GZF1Q9H116 711 aaPredicted RBP13.31□□□□□ -0.28
C3orf49-201ENST00000295896 RASA1P20936 1047 aa13.3□□□□□ -0.28
C3orf49-201ENST00000295896 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
C3orf49-201ENST00000295896 TMCO4Q5TGY1 634 aa13.3□□□□□ -0.28
C3orf49-201ENST00000295896 TMEM164Q5U3C3 297 aa13.3□□□□□ -0.28
C3orf49-201ENST00000295896 C1QTNF2Q9BXJ5 285 aa13.3□□□□□ -0.28
C3orf49-201ENST00000295896 CDV3Q9UKY7 258 aaKnown RBP13.3□□□□□ -0.28
C3orf49-201ENST00000295896 CCDC125Q86Z20 511 aa13.29□□□□□ -0.28
C3orf49-201ENST00000295896 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
C3orf49-201ENST00000295896 DOLKQ9UPQ8 538 aa13.29□□□□□ -0.28
C3orf49-201ENST00000295896 ATP1A2P50993 1020 aa13.28□□□□□ -0.28
C3orf49-201ENST00000295896 PTK7Q13308 1070 aa13.28□□□□□ -0.28
C3orf49-201ENST00000295896 CRTC2Q53ET0 693 aaPredicted RBP13.28□□□□□ -0.28
C3orf49-201ENST00000295896 NOD1Q9Y239 953 aa13.28□□□□□ -0.28
C3orf49-201ENST00000295896 KCNC4Q03721 635 aa13.27□□□□□ -0.29
C3orf49-201ENST00000295896 C4orf48Q5BLP8 95 aa13.27□□□□□ -0.29
C3orf49-201ENST00000295896 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.29
C3orf49-201ENST00000295896 ZBTB24O43167 697 aaPredicted RBP13.26□□□□□ -0.29
C3orf49-201ENST00000295896 FAM200AQ8TCP9 573 aa13.26□□□□□ -0.29
C3orf49-201ENST00000295896 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
C3orf49-201ENST00000295896 ITGBL1O95965 494 aaPredicted RBP13.25□□□□□ -0.29
C3orf49-201ENST00000295896 GGCXP38435 758 aa13.25□□□□□ -0.29
C3orf49-201ENST00000295896 ANKMY2Q8IV38 441 aa13.25□□□□□ -0.29
C3orf49-201ENST00000295896 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
C3orf49-201ENST00000295896 OGFOD1Q8N543 542 aa13.25□□□□□ -0.29
C3orf49-201ENST00000295896 CCDC85AQ96PX6 553 aaPredicted RBP13.25□□□□□ -0.29
C3orf49-201ENST00000295896 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
C3orf49-201ENST00000295896 HCSTQ9UBK5 93 aa13.25□□□□□ -0.29
C3orf49-201ENST00000295896 SH3BP2P78314 561 aa13.24□□□□□ -0.29
C3orf49-201ENST00000295896 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
C3orf49-201ENST00000295896 ANKLE1Q8NAG6 615 aa13.23□□□□□ -0.29
C3orf49-201ENST00000295896 SIRT1Q96EB6 747 aa13.23□□□□□ -0.29
C3orf49-201ENST00000295896 DNAAF2Q9NVR5 837 aaKnown RBP13.23□□□□□ -0.29
C3orf49-201ENST00000295896 ESPNB1AK53 854 aa13.22□□□□□ -0.29
C3orf49-201ENST00000295896 OXLD1Q5BKU9 147 aa13.22□□□□□ -0.29
C3orf49-201ENST00000295896 LARGE2Q8N3Y3 721 aa13.22□□□□□ -0.29
C3orf49-201ENST00000295896 TRIM32Q13049 653 aa13.21□□□□□ -0.29
C3orf49-201ENST00000295896 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
C3orf49-201ENST00000295896 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
C3orf49-201ENST00000295896 RNF223E7ERA6 249 aa13.2□□□□□ -0.3
C3orf49-201ENST00000295896 WNT7BP56706 349 aa13.2□□□□□ -0.3
C3orf49-201ENST00000295896 CLDN10P78369 228 aa13.2□□□□□ -0.3
C3orf49-201ENST00000295896 SWI5Q1ZZU3 235 aa13.2□□□□□ -0.3
C3orf49-201ENST00000295896 GNEQ9Y223 722 aaKnown RBP13.2□□□□□ -0.3
C3orf49-201ENST00000295896 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
C3orf49-201ENST00000295896 SIX5Q8N196 739 aa13.19□□□□□ -0.3
C3orf49-201ENST00000295896 CLP1Q92989 425 aaKnown RBP13.19□□□□□ -0.3
C3orf49-201ENST00000295896 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
C3orf49-201ENST00000295896 VARSP26640 1264 aaKnown RBP13.18□□□□□ -0.3
C3orf49-201ENST00000295896 MFAP1P55081 439 aaKnown RBP13.18□□□□□ -0.3
C3orf49-201ENST00000295896 GTF2IP78347 998 aa13.18□□□□□ -0.3
C3orf49-201ENST00000295896 DPYDQ12882 1025 aa13.18□□□□□ -0.3
C3orf49-201ENST00000295896 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
C3orf49-201ENST00000295896 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
C3orf49-201ENST00000295896 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
C3orf49-201ENST00000295896 USP4Q13107 963 aa13.17□□□□□ -0.3
C3orf49-201ENST00000295896 MAP4K5Q9Y4K4 846 aa13.17□□□□□ -0.3
C3orf49-201ENST00000295896 PCDHB11Q9Y5F2 797 aa13.17□□□□□ -0.3
C3orf49-201ENST00000295896 RPIAP49247 311 aa13.16□□□□□ -0.3
C3orf49-201ENST00000295896 CCER1Q8TC90 406 aaPredicted RBP13.16□□□□□ -0.3
C3orf49-201ENST00000295896 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
C3orf49-201ENST00000295896 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
C3orf49-201ENST00000295896 KCTD15Q96SI1 283 aaPredicted RBP13.15□□□□□ -0.3
C3orf49-201ENST00000295896 SSFA2P28290 1259 aa13.14□□□□□ -0.31
C3orf49-201ENST00000295896 SEC13P55735 322 aa13.13□□□□□ -0.31
C3orf49-201ENST00000295896 PLA2G2CQ5R387 149 aa13.13□□□□□ -0.31
C3orf49-201ENST00000295896 SND1Q7KZF4 910 aaKnown RBP eCLIP13.13□□□□□ -0.31
C3orf49-201ENST00000295896 TRIM52Q96A61 297 aa13.13□□□□□ -0.31
C3orf49-201ENST00000295896 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
C3orf49-201ENST00000295896 PSME1Q06323 249 aa13.12□□□□□ -0.31
C3orf49-201ENST00000295896 KIAA1024Q9UPX6 916 aa13.12□□□□□ -0.31
C3orf49-201ENST00000295896 DKK1O94907 266 aa13.11□□□□□ -0.31
C3orf49-201ENST00000295896 MYCP01106 439 aaPredicted RBP13.11□□□□□ -0.31
C3orf49-201ENST00000295896 ATP2B4P23634 1241 aa13.11□□□□□ -0.31
C3orf49-201ENST00000295896 SKOR1P84550 965 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms