RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ST18O60284 1047 aa13.88□□□□□ -0.19
NPC1L1-201ENST00000289547 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
NPC1L1-201ENST00000289547 PRAG1Q86YV5 1406 aa13.88□□□□□ -0.19
NPC1L1-201ENST00000289547 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
NPC1L1-201ENST00000289547 PZPP20742 1482 aa13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 LTKP29376 864 aa13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 FOXD4L6Q3SYB3 417 aaPredicted RBP13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 FOXD4L3Q6VB84 417 aaPredicted RBP13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 ZMYND15Q9H091 742 aa13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 C9orf78Q9NZ63 289 aaPredicted RBP13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 ARHGEF12Q9NZN5 1544 aa13.87□□□□□ -0.19
NPC1L1-201ENST00000289547 TMOD3Q9NYL9 352 aa13.86□□□□□ -0.19
NPC1L1-201ENST00000289547 KIAA1211Q6ZU35 1233 aa13.86□□□□□ -0.19
NPC1L1-201ENST00000289547 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
NPC1L1-201ENST00000289547 RIC3Q7Z5B4 369 aa13.86□□□□□ -0.19
NPC1L1-201ENST00000289547 BCL2L13Q9BXK5 485 aa13.85□□□□□ -0.19
NPC1L1-201ENST00000289547 API5Q9BZZ5 524 aaKnown RBP13.85□□□□□ -0.19
NPC1L1-201ENST00000289547 FCHSD2O94868 740 aa13.85□□□□□ -0.19
NPC1L1-201ENST00000289547 RALGAPBQ86X10 1494 aa13.85□□□□□ -0.19
NPC1L1-201ENST00000289547 DIP2BQ9P265 1576 aa13.85□□□□□ -0.19
NPC1L1-201ENST00000289547 GOLGA6L1Q8N7Z2 621 aa13.85□□□□□ -0.19
NPC1L1-201ENST00000289547 ESPNB1AK53 854 aa13.84□□□□□ -0.19
NPC1L1-201ENST00000289547 ZNF592Q92610 1267 aa13.84□□□□□ -0.19
NPC1L1-201ENST00000289547 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
NPC1L1-201ENST00000289547 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
NPC1L1-201ENST00000289547 CCDC30Q5VVM6 783 aa13.84□□□□□ -0.19
NPC1L1-201ENST00000289547 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
NPC1L1-201ENST00000289547 NECTIN2Q92692 538 aa13.83□□□□□ -0.19
NPC1L1-201ENST00000289547 ANKRD24Q8TF21 1146 aa13.83□□□□□ -0.2
NPC1L1-201ENST00000289547 CHRNA2Q15822 529 aa13.83□□□□□ -0.2
NPC1L1-201ENST00000289547 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 ANKRD36BQ8N2N9 1353 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 PLXNC1O60486 1568 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 STARD3NLO95772 234 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 ZKSCAN2Q63HK3 967 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 ARHGAP31Q2M1Z3 1444 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 ABCC3O15438 1527 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 GNAT3A8MTJ3 354 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 A2ML1A8K2U0 1454 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
NPC1L1-201ENST00000289547 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
NPC1L1-201ENST00000289547 AIMP1Q12904 312 aaKnown RBP13.8□□□□□ -0.2
NPC1L1-201ENST00000289547 CDCA7Q9BWT1 371 aaPredicted RBP13.8□□□□□ -0.2
NPC1L1-201ENST00000289547 BTBD11A6QL63 1104 aa13.8□□□□□ -0.2
NPC1L1-201ENST00000289547 MCTP1Q6DN14 999 aa13.8□□□□□ -0.2
NPC1L1-201ENST00000289547 GCC2Q8IWJ2 1684 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 KIF16BQ96L93 1317 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 RNF214Q8ND24 703 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 DDB1Q16531 1140 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 GRPEL1Q9HAV7 217 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
NPC1L1-201ENST00000289547 KDM5CP41229 1560 aa13.78□□□□□ -0.2
NPC1L1-201ENST00000289547 TRIM6-TRIM34B2RNG4 842 aa13.78□□□□□ -0.2
NPC1L1-201ENST00000289547 CCDC39Q9UFE4 941 aa13.78□□□□□ -0.2
NPC1L1-201ENST00000289547 CCDC173Q0VFZ6 552 aa13.78□□□□□ -0.2
NPC1L1-201ENST00000289547 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
NPC1L1-201ENST00000289547 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
NPC1L1-201ENST00000289547 TPM4P67936 248 aa13.77□□□□□ -0.2
NPC1L1-201ENST00000289547 VPS37DQ86XT2 251 aa13.77□□□□□ -0.2
NPC1L1-201ENST00000289547 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.2
NPC1L1-201ENST00000289547 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
NPC1L1-201ENST00000289547 TEX35Q5T0J7 233 aa13.76□□□□□ -0.21
NPC1L1-201ENST00000289547 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
NPC1L1-201ENST00000289547 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
NPC1L1-201ENST00000289547 GCP02774 474 aa13.76□□□□□ -0.21
NPC1L1-201ENST00000289547 NUCB2P80303 420 aa13.76□□□□□ -0.21
NPC1L1-201ENST00000289547 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
NPC1L1-201ENST00000289547 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
NPC1L1-201ENST00000289547 ARHGEF40Q8TER5 1519 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 NFE2L2Q16236 605 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 LRRFIP1Q32MZ4 808 aaKnown RBP13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 HDGFL1Q5TGJ6 251 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 ZPR1O75312 459 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 ZCRB1Q8TBF4 217 aaKnown RBP13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 TEX13AQ9BXU3 409 aaPredicted RBP13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 PIK3C2GO75747 1445 aa13.75□□□□□ -0.21
NPC1L1-201ENST00000289547 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 GOLGA6L19H0YKK7 550 aa13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 IL2RBP14784 551 aa13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 SMARCC1Q92922 1105 aaPredicted RBP13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 UQCRHLA0A096LP55 91 aa13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 UQCRHP07919 91 aa13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 CFAP65Q6ZU64 1925 aaKnown RBP13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 NBPF14Q5TI25 921 aa13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 BTG4Q9NY30 223 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms