RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
CCNA2-201ENST00000274026 CHGAP10645 457 aaKnown RBP20.43■□□□□ 0.86
CCNA2-201ENST00000274026 PKP1Q13835 747 aa20.43■□□□□ 0.86
CCNA2-201ENST00000274026 SIRT2Q8IXJ6 389 aa20.43■□□□□ 0.86
CCNA2-201ENST00000274026 PRPF40AO75400 957 aaKnown RBP20.42■□□□□ 0.86
CCNA2-201ENST00000274026 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
CCNA2-201ENST00000274026 GPT2Q8TD30 523 aa20.42■□□□□ 0.86
CCNA2-201ENST00000274026 ARHGAP45Q92619 1136 aa20.42■□□□□ 0.86
CCNA2-201ENST00000274026 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
CCNA2-201ENST00000274026 FANCAO15360 1455 aa20.41■□□□□ 0.86
CCNA2-201ENST00000274026 GSPT1P15170 499 aaKnown RBP20.41■□□□□ 0.86
CCNA2-201ENST00000274026 LRSAM1Q6UWE0 723 aa20.41■□□□□ 0.86
CCNA2-201ENST00000274026 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
CCNA2-201ENST00000274026 SASS6Q6UVJ0 657 aa20.4■□□□□ 0.86
CCNA2-201ENST00000274026 USP26Q9BXU7 913 aa20.4■□□□□ 0.86
CCNA2-201ENST00000274026 TULP4Q9NRJ4 1543 aa20.4■□□□□ 0.86
CCNA2-201ENST00000274026 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
CCNA2-201ENST00000274026 SMAP1Q8IYB5 467 aaPredicted RBP20.4■□□□□ 0.86
CCNA2-201ENST00000274026 ARAP3Q8WWN8 1544 aa20.39■□□□□ 0.86
CCNA2-201ENST00000274026 PTCH1Q13635 1447 aa20.39■□□□□ 0.85
CCNA2-201ENST00000274026 PPLO60437 1756 aa20.39■□□□□ 0.85
CCNA2-201ENST00000274026 PLEKHM2Q8IWE5 1019 aa20.39■□□□□ 0.85
CCNA2-201ENST00000274026 MRPL50Q8N5N7 158 aaKnown RBP20.39■□□□□ 0.85
CCNA2-201ENST00000274026 GGNBP2Q9H3C7 697 aa20.39■□□□□ 0.85
CCNA2-201ENST00000274026 CABP2Q9NPB3 220 aa20.38■□□□□ 0.85
CCNA2-201ENST00000274026 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
CCNA2-201ENST00000274026 TMEM63CQ9P1W3 806 aa20.37■□□□□ 0.85
CCNA2-201ENST00000274026 ST18O60284 1047 aa20.36■□□□□ 0.85
CCNA2-201ENST00000274026 SYCE3A1L190 88 aa20.36■□□□□ 0.85
CCNA2-201ENST00000274026 VAMP4O75379 141 aa20.36■□□□□ 0.85
CCNA2-201ENST00000274026 TTC22Q5TAA0 569 aa20.36■□□□□ 0.85
CCNA2-201ENST00000274026 ZGPATQ8N5A5 531 aaKnown RBP20.36■□□□□ 0.85
CCNA2-201ENST00000274026 ZDHHC9Q9Y397 364 aa20.36■□□□□ 0.85
CCNA2-201ENST00000274026 A0A1W2PP64 1363 aa20.36■□□□□ 0.85
CCNA2-201ENST00000274026 INTS3Q68E01 1043 aaKnown RBP20.35■□□□□ 0.85
CCNA2-201ENST00000274026 ABCC4O15439 1325 aa20.35■□□□□ 0.85
CCNA2-201ENST00000274026 ERCC6L2Q5T890 1561 aa20.35■□□□□ 0.85
CCNA2-201ENST00000274026 GLI2P10070 1586 aa20.33■□□□□ 0.85
CCNA2-201ENST00000274026 FCHSD2O94868 740 aa20.33■□□□□ 0.84
CCNA2-201ENST00000274026 MBD3O95983 291 aa20.32■□□□□ 0.84
CCNA2-201ENST00000274026 ARHGEF28Q8N1W1 1705 aaKnown RBP20.32■□□□□ 0.84
CCNA2-201ENST00000274026 DCTPP1Q9H773 170 aa20.32■□□□□ 0.84
CCNA2-201ENST00000274026 RPGRIP1LQ68CZ1 1315 aa20.32■□□□□ 0.84
CCNA2-201ENST00000274026 LMTK2Q8IWU2 1503 aa20.31■□□□□ 0.84
CCNA2-201ENST00000274026 ARID3AQ99856 593 aa20.31■□□□□ 0.84
CCNA2-201ENST00000274026 NSFL1CQ9UNZ2 370 aaKnown RBP20.31■□□□□ 0.84
CCNA2-201ENST00000274026 FYB1O15117 783 aa20.31■□□□□ 0.84
CCNA2-201ENST00000274026 PNPLA6Q8IY17 1366 aa20.31■□□□□ 0.84
CCNA2-201ENST00000274026 TSPYL6Q8N831 410 aa20.3■□□□□ 0.84
CCNA2-201ENST00000274026 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
CCNA2-201ENST00000274026 CHD1O14646 1710 aa20.29■□□□□ 0.84
CCNA2-201ENST00000274026 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
CCNA2-201ENST00000274026 CASC1Q6TDU7 716 aa20.29■□□□□ 0.84
CCNA2-201ENST00000274026 RNF214Q8ND24 703 aa20.29■□□□□ 0.84
CCNA2-201ENST00000274026 PTMAP06454 111 aaKnown RBP20.29■□□□□ 0.84
CCNA2-201ENST00000274026 CCDC94Q9BW85 323 aaPredicted RBP20.29■□□□□ 0.84
CCNA2-201ENST00000274026 LRRC7Q96NW7 1537 aa20.29■□□□□ 0.84
CCNA2-201ENST00000274026 CHAMP1Q96JM3 812 aa20.29■□□□□ 0.84
CCNA2-201ENST00000274026 PRKAR2BP31323 418 aa20.28■□□□□ 0.84
CCNA2-201ENST00000274026 C16orf71Q8IYS4 520 aaPredicted RBP20.28■□□□□ 0.84
CCNA2-201ENST00000274026 API5Q9BZZ5 524 aaKnown RBP20.28■□□□□ 0.84
CCNA2-201ENST00000274026 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.84
CCNA2-201ENST00000274026 UHRF1BP1LA0JNW5 1464 aa20.27■□□□□ 0.84
CCNA2-201ENST00000274026 SDSP20132 328 aa20.27■□□□□ 0.83
CCNA2-201ENST00000274026 GNAI1P63096 354 aa20.27■□□□□ 0.83
CCNA2-201ENST00000274026 MYRIPQ8NFW9 859 aa20.27■□□□□ 0.83
CCNA2-201ENST00000274026 TSPY26PQ9H489 355 aa20.27■□□□□ 0.83
CCNA2-201ENST00000274026 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
CCNA2-201ENST00000274026 REC8O95072 547 aa20.26■□□□□ 0.83
CCNA2-201ENST00000274026 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
CCNA2-201ENST00000274026 TERF2IPQ9NYB0 399 aa20.26■□□□□ 0.83
CCNA2-201ENST00000274026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.26■□□□□ 0.835e-8■□□□□ 11.3
CCNA2-201ENST00000274026 CDC42BPGQ6DT37 1551 aa20.26■□□□□ 0.83
CCNA2-201ENST00000274026 KIF24Q5T7B8 1368 aa20.26■□□□□ 0.83
CCNA2-201ENST00000274026 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
CCNA2-201ENST00000274026 KNDC1Q76NI1 1749 aa20.26■□□□□ 0.83
CCNA2-201ENST00000274026 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
CCNA2-201ENST00000274026 THUMPD2Q9BTF0 503 aaKnown RBP20.25■□□□□ 0.83
CCNA2-201ENST00000274026 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
CCNA2-201ENST00000274026 CFAP65Q6ZU64 1925 aaKnown RBP20.25■□□□□ 0.83
CCNA2-201ENST00000274026 FOXD4L5Q5VV16 416 aaPredicted RBP20.24■□□□□ 0.83
CCNA2-201ENST00000274026 FOXD4L4Q8WXT5 416 aaPredicted RBP20.24■□□□□ 0.83
CCNA2-201ENST00000274026 ABCA9Q8IUA7 1624 aa20.24■□□□□ 0.83
CCNA2-201ENST00000274026 TWISTNBQ3B726 338 aaPredicted RBP20.23■□□□□ 0.83
CCNA2-201ENST00000274026 DNTTIP2Q5QJE6 756 aaKnown RBP20.23■□□□□ 0.83
CCNA2-201ENST00000274026 OTUD7AQ8TE49 926 aaPredicted RBP20.23■□□□□ 0.83
CCNA2-201ENST00000274026 PRDM10Q9NQV6 1147 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 PODXL2Q9NZ53 605 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 ZFYVE9O95405 1425 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 NPATQ14207 1427 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 UTP14CQ5TAP6 766 aaKnown RBP20.23■□□□□ 0.83
CCNA2-201ENST00000274026 SYAP1Q96A49 352 aaPredicted RBP20.23■□□□□ 0.83
CCNA2-201ENST00000274026 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 ATAD2Q6PL18 1390 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 YEATS2Q9ULM3 1422 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 PRIMPOLQ96LW4 560 aa20.23■□□□□ 0.83
CCNA2-201ENST00000274026 ZNF853P0CG23 659 aa20.22■□□□□ 0.83
CCNA2-201ENST00000274026 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
CCNA2-201ENST00000274026 CAMSAP1Q5T5Y3 1602 aa20.22■□□□□ 0.83
CCNA2-201ENST00000274026 BRD1O95696 1058 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms