RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 PRIM1P49642 420 aaKnown RBP19.47■□□□□ 0.71
CTDSP1-201ENST00000273062 STAG3Q9UJ98 1225 aa19.47■□□□□ 0.71
CTDSP1-201ENST00000273062 HSP90AB1P08238 724 aaKnown RBP19.47■□□□□ 0.71
CTDSP1-201ENST00000273062 RLBP1P12271 317 aa19.47■□□□□ 0.71
CTDSP1-201ENST00000273062 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
CTDSP1-201ENST00000273062 ZSCAN23Q3MJ62 389 aa19.46■□□□□ 0.71
CTDSP1-201ENST00000273062 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
CTDSP1-201ENST00000273062 EVC2Q86UK5 1308 aa19.46■□□□□ 0.71
CTDSP1-201ENST00000273062 IBTKQ9P2D0 1353 aaPredicted RBP19.46■□□□□ 0.71
CTDSP1-201ENST00000273062 ZFYVE9O95405 1425 aa19.46■□□□□ 0.71
CTDSP1-201ENST00000273062 APAF1O14727 1248 aa19.45■□□□□ 0.7
CTDSP1-201ENST00000273062 MINK1Q8N4C8 1332 aaPredicted RBP19.45■□□□□ 0.7
CTDSP1-201ENST00000273062 ZNF445P59923 1031 aa19.45■□□□□ 0.7
CTDSP1-201ENST00000273062 PRAM1Q96QH2 718 aa19.45■□□□□ 0.7
CTDSP1-201ENST00000273062 CIZ1Q9ULV3 898 aaPredicted RBP19.44■□□□□ 0.7
CTDSP1-201ENST00000273062 MPNDQ8N594 471 aa19.44■□□□□ 0.7
CTDSP1-201ENST00000273062 E9PSI1 815 aa19.43■□□□□ 0.7
CTDSP1-201ENST00000273062 IRX5P78411 483 aaPredicted RBP19.43■□□□□ 0.7
CTDSP1-201ENST00000273062 CHMP4AQ9BY43 222 aa19.43■□□□□ 0.7
CTDSP1-201ENST00000273062 BAG4O95429 457 aaKnown RBP19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 SRPK2P78362 688 aaKnown RBP19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 PMFBP1Q8TBY8 1022 aa19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 KIF13AQ9H1H9 1805 aa19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 PTPRMP28827 1452 aa19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 CDK11BP21127 795 aaKnown RBP19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 DNTTIP2Q5QJE6 756 aaKnown RBP19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 RBM27Q9P2N5 1060 aaKnown RBP19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 AGLP35573 1532 aa19.42■□□□□ 0.7
CTDSP1-201ENST00000273062 FTSJ3Q8IY81 847 aaKnown RBP19.41■□□□□ 0.7
CTDSP1-201ENST00000273062 ZMYM3Q14202 1370 aa19.41■□□□□ 0.7
CTDSP1-201ENST00000273062 U2AF2P26368 475 aaKnown RBP eCLIP19.41■□□□□ 0.7
CTDSP1-201ENST00000273062 YTHDC2Q9H6S0 1430 aaKnown RBP19.41■□□□□ 0.7
CTDSP1-201ENST00000273062 SNX21Q969T3 373 aa19.4■□□□□ 0.7
CTDSP1-201ENST00000273062 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
CTDSP1-201ENST00000273062 MCM5P33992 734 aa19.4■□□□□ 0.7
CTDSP1-201ENST00000273062 C17orf53Q8N3J3 647 aaPredicted RBP19.39■□□□□ 0.7
CTDSP1-201ENST00000273062 ALKQ9UM73 1620 aa19.39■□□□□ 0.69
CTDSP1-201ENST00000273062 MCTP1Q6DN14 999 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 ANKRD36BQ8N2N9 1353 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 A2ML1A8K2U0 1454 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 A0A1W2PP64 1363 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 PTMSP20962 102 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 GAS2L2Q8NHY3 880 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 ZFP91Q96JP5 570 aaPredicted RBP19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 RBM42Q9BTD8 480 aaKnown RBP19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 BCL2L13Q9BXK5 485 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 BCL2L12Q9HB09 334 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.38■□□□□ 0.691e-7■□□□□ 8.2
CTDSP1-201ENST00000273062 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 MTHFSP49914 203 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 ZNF771Q7L3S4 317 aaPredicted RBP19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 CERS3Q8IU89 383 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 CCDC39Q9UFE4 941 aa19.38■□□□□ 0.69
CTDSP1-201ENST00000273062 GOLGA6L22H0YM25 854 aa19.37■□□□□ 0.69
CTDSP1-201ENST00000273062 RNF214Q8ND24 703 aa19.37■□□□□ 0.69
CTDSP1-201ENST00000273062 KIF2CQ99661 725 aa19.37■□□□□ 0.69
CTDSP1-201ENST00000273062 ARHGEF40Q8TER5 1519 aa19.37■□□□□ 0.69
CTDSP1-201ENST00000273062 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
CTDSP1-201ENST00000273062 KIAA2012Q0VF49 1180 aa19.36■□□□□ 0.69
CTDSP1-201ENST00000273062 GTF2F1P35269 517 aaKnown RBP eCLIP19.36■□□□□ 0.691e-8■■■□□ 18.5
CTDSP1-201ENST00000273062 KCNJ4P48050 445 aa19.36■□□□□ 0.69
CTDSP1-201ENST00000273062 RBM25P49756 843 aaKnown RBP19.36■□□□□ 0.69
CTDSP1-201ENST00000273062 WAPLQ7Z5K2 1190 aa19.36■□□□□ 0.69
CTDSP1-201ENST00000273062 RRP7AQ9Y3A4 280 aaKnown RBP19.36■□□□□ 0.69
CTDSP1-201ENST00000273062 SPATA31D1Q6ZQQ2 1576 aa19.35■□□□□ 0.69
CTDSP1-201ENST00000273062 TAF3Q5VWG9 929 aa19.35■□□□□ 0.69
CTDSP1-201ENST00000273062 NEUROD2Q15784 382 aa19.34■□□□□ 0.69
CTDSP1-201ENST00000273062 PDCL2Q8N4E4 241 aa19.34■□□□□ 0.69
CTDSP1-201ENST00000273062 CHAMP1Q96JM3 812 aa19.34■□□□□ 0.69
CTDSP1-201ENST00000273062 GGNBP2Q9H3C7 697 aa19.34■□□□□ 0.69
CTDSP1-201ENST00000273062 RIMS2Q9UQ26 1411 aa19.34■□□□□ 0.69
CTDSP1-201ENST00000273062 USP32Q8NFA0 1604 aa19.34■□□□□ 0.69
CTDSP1-201ENST00000273062 LMBRD1Q9NUN5 540 aa19.34■□□□□ 0.69
CTDSP1-201ENST00000273062 KIF3AQ9Y496 699 aa19.33■□□□□ 0.69
CTDSP1-201ENST00000273062 PKP1Q13835 747 aa19.33■□□□□ 0.68
CTDSP1-201ENST00000273062 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.68
CTDSP1-201ENST00000273062 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
CTDSP1-201ENST00000273062 GPT2Q8TD30 523 aa19.32■□□□□ 0.68
CTDSP1-201ENST00000273062 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
CTDSP1-201ENST00000273062 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
CTDSP1-201ENST00000273062 SYCE3A1L190 88 aa19.31■□□□□ 0.68
CTDSP1-201ENST00000273062 CLEC17AQ6ZS10 378 aa19.31■□□□□ 0.68
CTDSP1-201ENST00000273062 PRIMPOLQ96LW4 560 aa19.31■□□□□ 0.68
CTDSP1-201ENST00000273062 CD163L1Q9NR16 1453 aa19.31■□□□□ 0.68
CTDSP1-201ENST00000273062 PTMAP06454 111 aaKnown RBP19.31■□□□□ 0.68
CTDSP1-201ENST00000273062 HMGN5P82970 282 aaKnown RBP19.31■□□□□ 0.68
CTDSP1-201ENST00000273062 AK9Q5TCS8 1911 aa19.31■□□□□ 0.68
CTDSP1-201ENST00000273062 K7ELQ4 463 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-201ENST00000273062 NSFL1CQ9UNZ2 370 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-201ENST00000273062 ESF1Q9H501 851 aaKnown RBP19.29■□□□□ 0.68
CTDSP1-201ENST00000273062 CABP1Q9NZU7 370 aa19.29■□□□□ 0.68
CTDSP1-201ENST00000273062 TMEM63CQ9P1W3 806 aa19.29■□□□□ 0.68
CTDSP1-201ENST00000273062 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
CTDSP1-201ENST00000273062 WWC1Q8IX03 1113 aa19.28■□□□□ 0.68
CTDSP1-201ENST00000273062 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
CTDSP1-201ENST00000273062 KLHL34Q8N239 644 aa19.28■□□□□ 0.68
CTDSP1-201ENST00000273062 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-201ENST00000273062 PRPF40AO75400 957 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-201ENST00000273062 NOLC1Q14978 699 aaKnown RBP eCLIP19.27■□□□□ 0.68
CTDSP1-201ENST00000273062 METP08581 1390 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms