RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 L1TD1Q5T7N2 865 aaKnown RBP27.76■■■□□ 2.04
CDR2-201ENST00000268383 C8orf58Q8NAV2 365 aa27.76■■■□□ 2.04
CDR2-201ENST00000268383 RICTORQ6R327 1708 aa27.76■■■□□ 2.04
CDR2-201ENST00000268383 CLTCQ00610 1675 aaKnown RBP27.76■■■□□ 2.03
CDR2-201ENST00000268383 GOLGA6L3A6NEY3 463 aa27.76■■■□□ 2.03
CDR2-201ENST00000268383 RBM25P49756 843 aaKnown RBP27.75■■■□□ 2.03
CDR2-201ENST00000268383 MLECQ14165 292 aa27.74■■■□□ 2.03
CDR2-201ENST00000268383 KIF2CQ99661 725 aa27.74■■■□□ 2.03
CDR2-201ENST00000268383 IL13P35225 146 aa27.73■■■□□ 2.03
CDR2-201ENST00000268383 TWISTNBQ3B726 338 aaPredicted RBP27.72■■■□□ 2.03
CDR2-201ENST00000268383 HSP90AB1P08238 724 aaKnown RBP27.72■■■□□ 2.03
CDR2-201ENST00000268383 BMP2KLQ5H9B9 411 aa27.72■■■□□ 2.03
CDR2-201ENST00000268383 TBC1D9Q6ZT07 1266 aa27.72■■■□□ 2.03
CDR2-201ENST00000268383 FSD2A1L4K1 749 aa27.7■■■□□ 2.03
CDR2-201ENST00000268383 KRT24Q2M2I5 525 aa27.7■■■□□ 2.02
CDR2-201ENST00000268383 GNAI1P63096 354 aa27.69■■■□□ 2.02
CDR2-201ENST00000268383 TNPO1Q92973 898 aaKnown RBP27.69■■■□□ 2.02
CDR2-201ENST00000268383 TXNDC2Q86VQ3 553 aa27.69■■■□□ 2.02
CDR2-201ENST00000268383 DDIT3P35638 169 aa27.68■■■□□ 2.02
CDR2-201ENST00000268383 IFT57Q9NWB7 429 aa27.67■■■□□ 2.02
CDR2-201ENST00000268383 BRPF1P55201 1214 aaPredicted RBP27.67■■■□□ 2.02
CDR2-201ENST00000268383 GCC1Q96CN9 775 aa27.67■■■□□ 2.02
CDR2-201ENST00000268383 ZNF853P0CG23 659 aa27.66■■■□□ 2.02
CDR2-201ENST00000268383 CDC42BPGQ6DT37 1551 aa27.65■■■□□ 2.02
CDR2-201ENST00000268383 HSP90AA1P07900 732 aaKnown RBP27.65■■■□□ 2.02
CDR2-201ENST00000268383 C16orf71Q8IYS4 520 aaPredicted RBP27.65■■■□□ 2.02
CDR2-201ENST00000268383 SNX21Q969T3 373 aa27.65■■■□□ 2.02
CDR2-201ENST00000268383 ABCC4O15439 1325 aa27.64■■■□□ 2.02
CDR2-201ENST00000268383 AEBP1Q8IUX7 1158 aa27.64■■■□□ 2.02
CDR2-201ENST00000268383 PTCH1Q13635 1447 aa27.64■■■□□ 2.02
CDR2-201ENST00000268383 NCOA3Q9Y6Q9 1424 aa27.64■■■□□ 2.02
CDR2-201ENST00000268383 ZNF428Q96B54 188 aa27.63■■■□□ 2.01
CDR2-201ENST00000268383 APBB1O00213 710 aa27.63■■■□□ 2.01
CDR2-201ENST00000268383 ARHGAP45Q92619 1136 aa27.63■■■□□ 2.01
CDR2-201ENST00000268383 DLG5Q8TDM6 1919 aa27.62■■■□□ 2.01
CDR2-201ENST00000268383 WASLO00401 505 aaPredicted RBP27.62■■■□□ 2.01
CDR2-201ENST00000268383 GSPT1P15170 499 aaKnown RBP27.62■■■□□ 2.01
CDR2-201ENST00000268383 CFAP44Q96MT7 982 aa27.62■■■□□ 2.01
CDR2-201ENST00000268383 PIK3R4Q99570 1358 aa27.61■■■□□ 2.01
CDR2-201ENST00000268383 NUTM2FA1L443 756 aa27.6■■■□□ 2.01
CDR2-201ENST00000268383 CALD1Q05682 793 aaKnown RBP27.6■■■□□ 2.01
CDR2-201ENST00000268383 OTUD7AQ8TE49 926 aaPredicted RBP27.6■■■□□ 2.01
CDR2-201ENST00000268383 NUDT16Q96DE0 195 aaKnown RBP27.6■■■□□ 2.01
CDR2-201ENST00000268383 COG3Q96JB2 828 aa27.6■■■□□ 2.01
CDR2-201ENST00000268383 DDX11L8A8MPP1 907 aa27.59■■■□□ 2.01
CDR2-201ENST00000268383 ATP7BP35670 1465 aa27.59■■■□□ 2.01
CDR2-201ENST00000268383 METP08581 1390 aa27.59■■■□□ 2.01
CDR2-201ENST00000268383 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
CDR2-201ENST00000268383 GAS2L2Q8NHY3 880 aa27.59■■■□□ 2.01
CDR2-201ENST00000268383 CPS1P31327 1500 aa27.59■■■□□ 2.01
CDR2-201ENST00000268383 RIMS2Q9UQ26 1411 aa27.58■■■□□ 2.01
CDR2-201ENST00000268383 AK9Q5TCS8 1911 aa27.58■■■□□ 2.01
CDR2-201ENST00000268383 SOX12O15370 315 aa27.57■■■□□ 2
CDR2-201ENST00000268383 GAS2L3Q86XJ1 694 aa27.57■■■□□ 2
CDR2-201ENST00000268383 A2ML1A8K2U0 1454 aa27.57■■■□□ 2
CDR2-201ENST00000268383 MCM10Q7L590 875 aa27.56■■■□□ 2
CDR2-201ENST00000268383 PLEKHM2Q8IWE5 1019 aa27.56■■■□□ 2
CDR2-201ENST00000268383 CPSF1Q10570 1443 aaKnown RBP27.56■■■□□ 2
CDR2-201ENST00000268383 SSFA2P28290 1259 aa27.56■■■□□ 2
CDR2-201ENST00000268383 RAB3GAP1Q15042 981 aa27.56■■■□□ 2
CDR2-201ENST00000268383 EDC4Q6P2E9 1401 aaKnown RBP27.55■■■□□ 2
CDR2-201ENST00000268383 K7ELQ4 463 aaPredicted RBP27.55■■■□□ 2
CDR2-201ENST00000268383 KNDC1Q76NI1 1749 aa27.55■■■□□ 2
CDR2-201ENST00000268383 SMARCA5O60264 1052 aaPredicted RBP27.55■■■□□ 2
CDR2-201ENST00000268383 GRPEL1Q9HAV7 217 aa27.55■■■□□ 2
CDR2-201ENST00000268383 SULT6B1Q6IMI4 303 aa27.54■■■□□ 2
CDR2-201ENST00000268383 API5Q9BZZ5 524 aaKnown RBP27.54■■■□□ 2
CDR2-201ENST00000268383 FAM69CQ0P6D2 419 aa27.54■■■□□ 2
CDR2-201ENST00000268383 CDC45O75419 566 aa27.53■■■□□ 2
CDR2-201ENST00000268383 CHMP4BQ9H444 224 aaKnown RBP27.53■■■□□ 2
CDR2-201ENST00000268383 MIS18AQ9NYP9 233 aa27.52■■■□□ 2
CDR2-201ENST00000268383 MRE11P49959 708 aa27.52■■■□□ 2
CDR2-201ENST00000268383 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
CDR2-201ENST00000268383 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
CDR2-201ENST00000268383 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
CDR2-201ENST00000268383 CDK12Q9NYV4 1490 aaPredicted RBP27.51■■■□□ 2
CDR2-201ENST00000268383 CCDC61Q9Y6R9 512 aa27.5■■□□□ 1.99
CDR2-201ENST00000268383 LMOD3Q0VAK6 560 aa27.49■■□□□ 1.99
CDR2-201ENST00000268383 EIF4A2Q14240 407 aaKnown RBP27.49■■□□□ 1.99
CDR2-201ENST00000268383 GBP4Q96PP9 640 aa27.49■■□□□ 1.99
CDR2-201ENST00000268383 DCTPP1Q9H773 170 aa27.49■■□□□ 1.99
CDR2-201ENST00000268383 PRR36Q9H6K5 1346 aa27.49■■□□□ 1.99
CDR2-201ENST00000268383 TSPOAP1O95153 1857 aa27.48■■□□□ 1.99
CDR2-201ENST00000268383 SETD1AO15047 1707 aaKnown RBP27.48■■□□□ 1.99
CDR2-201ENST00000268383 CIZ1Q9ULV3 898 aaPredicted RBP27.47■■□□□ 1.99
CDR2-201ENST00000268383 DLC1Q96QB1 1528 aa27.47■■□□□ 1.99
CDR2-201ENST00000268383 TTC22Q5TAA0 569 aa27.47■■□□□ 1.99
CDR2-201ENST00000268383 MEIS3Q99687 375 aa27.47■■□□□ 1.99
CDR2-201ENST00000268383 AATKQ6ZMQ8 1374 aa27.45■■□□□ 1.99
CDR2-201ENST00000268383 HSP90AB2PQ58FF8 381 aa27.45■■□□□ 1.99
CDR2-201ENST00000268383 MSH6P52701 1360 aa27.44■■□□□ 1.98
CDR2-201ENST00000268383 PKP1Q13835 747 aa27.43■■□□□ 1.98
CDR2-201ENST00000268383 CEP85Q6P2H3 762 aa27.43■■□□□ 1.98
CDR2-201ENST00000268383 FOXO3O43524 673 aa27.43■■□□□ 1.98
CDR2-201ENST00000268383 INTS3Q68E01 1043 aaKnown RBP27.43■■□□□ 1.98
CDR2-201ENST00000268383 ANKRD44Q8N8A2 993 aa27.42■■□□□ 1.98
CDR2-201ENST00000268383 RGS12O14924 1447 aa27.42■■□□□ 1.98
CDR2-201ENST00000268383 ERBB4Q15303 1308 aa27.42■■□□□ 1.98
CDR2-201ENST00000268383 ATP10DQ9P241 1426 aa27.42■■□□□ 1.98
CDR2-201ENST00000268383 SDSP20132 328 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms