RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GNAI3P08754 354 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 AAMPQ13685 434 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 ZSCAN30Q86W11 494 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 PPFIBP1Q86W92 1011 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 SSFA2P28290 1259 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 KRT85P78386 507 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 XBP1P17861 261 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 IKQ13123 557 aaPredicted RBP14.3□□□□□ -0.12
SMG6-201ENST00000263073 ATF7IPQ6VMQ6 1270 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
SMG6-201ENST00000263073 PDCP20941 246 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 NUP62CLQ9H1M0 184 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 TAX1BP1Q86VP1 789 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 MYOM3Q5VTT5 1437 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 TMEM57Q8N5G2 664 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 CCP110O43303 1012 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 CCDC181Q5TID7 509 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 TANGO6Q9C0B7 1094 aa14.29□□□□□ -0.12
SMG6-201ENST00000263073 NLRP6P59044 892 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 TTC39AQ5SRH9 613 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 DEF6Q9H4E7 631 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
SMG6-201ENST00000263073 LRRC9Q6ZRR7 1453 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 PRDM2Q13029 1718 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 KIAA0754O94854 1291 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 CDK5RAP3Q96JB5 506 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 UPF3BQ9BZI7 483 aaKnown RBP14.28□□□□□ -0.12
SMG6-201ENST00000263073 POLR3GO15318 223 aaPredicted RBP14.28□□□□□ -0.12
SMG6-201ENST00000263073 MYL6BP14649 208 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 TAF3Q5VWG9 929 aa14.28□□□□□ -0.12
SMG6-201ENST00000263073 ZBTB9Q96C00 473 aa14.27□□□□□ -0.12
SMG6-201ENST00000263073 CASTP20810 708 aaKnown RBP14.27□□□□□ -0.12
SMG6-201ENST00000263073 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.12
SMG6-201ENST00000263073 CCDC83Q8IWF9 413 aa14.27□□□□□ -0.12
SMG6-201ENST00000263073 RBM33Q96EV2 1170 aaKnown RBP14.27□□□□□ -0.12
SMG6-201ENST00000263073 TRMT1Q9NXH9 659 aaKnown RBP14.27□□□□□ -0.12
SMG6-201ENST00000263073 ANKRD62A6NC57 917 aa14.27□□□□□ -0.13
SMG6-201ENST00000263073 RBM27Q9P2N5 1060 aaKnown RBP14.27□□□□□ -0.13
SMG6-201ENST00000263073 NEFHP12036 1026 aa14.27□□□□□ -0.13
SMG6-201ENST00000263073 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.13
SMG6-201ENST00000263073 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.13
SMG6-201ENST00000263073 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
SMG6-201ENST00000263073 AACSQ86V21 672 aa14.26□□□□□ -0.13
SMG6-201ENST00000263073 EXOC6BQ9Y2D4 811 aa14.26□□□□□ -0.13
SMG6-201ENST00000263073 KRT18P05783 430 aaKnown RBP14.26□□□□□ -0.13
SMG6-201ENST00000263073 MIA2Q96PC5 1412 aa14.26□□□□□ -0.13
SMG6-201ENST00000263073 ENOX2Q16206 610 aaKnown RBP14.26□□□□□ -0.13
SMG6-201ENST00000263073 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
SMG6-201ENST00000263073 USP25Q9UHP3 1055 aa14.26□□□□□ -0.13
SMG6-201ENST00000263073 SART3Q15020 963 aaKnown RBP14.25□□□□□ -0.13
SMG6-201ENST00000263073 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMG6-201ENST00000263073 ANKRD50Q9ULJ7 1429 aa14.25□□□□□ -0.13
SMG6-201ENST00000263073 HDGFL1Q5TGJ6 251 aa14.25□□□□□ -0.13
SMG6-201ENST00000263073 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
SMG6-201ENST00000263073 TBC1D2Q9BYX2 928 aa14.25□□□□□ -0.13
SMG6-201ENST00000263073 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
SMG6-201ENST00000263073 GOLGA6L10A6NI86 522 aa14.25□□□□□ -0.13
SMG6-201ENST00000263073 CCDC85AQ96PX6 553 aaPredicted RBP14.24□□□□□ -0.13
SMG6-201ENST00000263073 ZNHIT6Q9NWK9 470 aaKnown RBP14.24□□□□□ -0.13
SMG6-201ENST00000263073 ATP2B2Q01814 1243 aa14.24□□□□□ -0.13
SMG6-201ENST00000263073 C16orf45Q96MC5 204 aaPredicted RBP14.24□□□□□ -0.13
SMG6-201ENST00000263073 RRS1Q15050 365 aaKnown RBP14.24□□□□□ -0.13
SMG6-201ENST00000263073 CKAP2LQ8IYA6 745 aa14.24□□□□□ -0.13
SMG6-201ENST00000263073 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
SMG6-201ENST00000263073 PRAM1Q96QH2 718 aa14.24□□□□□ -0.13
SMG6-201ENST00000263073 CFTRP13569 1480 aa14.24□□□□□ -0.13
SMG6-201ENST00000263073 GUCY1B3Q02153 619 aa14.24□□□□□ -0.13
SMG6-201ENST00000263073 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
SMG6-201ENST00000263073 NESP48681 1621 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 SEPT11Q9NVA2 429 aaKnown RBP14.23□□□□□ -0.13
SMG6-201ENST00000263073 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 CFAP100Q494V2 611 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 PPP4R3BQ5MIZ7 849 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 NCOA2Q15596 1464 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 ZNF830Q96NB3 372 aaPredicted RBP14.23□□□□□ -0.13
SMG6-201ENST00000263073 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
SMG6-201ENST00000263073 CNNM1Q9NRU3 951 aa14.23□□□□□ -0.13
SMG6-201ENST00000263073 TXLNAP40222 546 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 MAP3K11Q16584 847 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 CCAR1Q8IX12 1150 aaKnown RBP14.22□□□□□ -0.13
SMG6-201ENST00000263073 UBXN4Q92575 508 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 PTPRGP23470 1445 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 DNA2P51530 1060 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 HIP1O00291 1037 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 ERLIN1O75477 346 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 CCDC69A6NI79 296 aa14.22□□□□□ -0.13
SMG6-201ENST00000263073 EIF3JO75822 258 aaKnown RBP14.21□□□□□ -0.13
SMG6-201ENST00000263073 CEP57L1Q8IYX8 460 aa14.21□□□□□ -0.13
SMG6-201ENST00000263073 ZMYND15Q9H091 742 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms