RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 RBM19Q9Y4C8 960 aaKnown RBP16.9■□□□□ 0.3
CDH1-201ENST00000261769 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
CDH1-201ENST00000261769 SLC3A2P08195 630 aaKnown RBP16.9■□□□□ 0.3
CDH1-201ENST00000261769 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
CDH1-201ENST00000261769 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
CDH1-201ENST00000261769 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
CDH1-201ENST00000261769 FYB1O15117 783 aa16.89■□□□□ 0.29
CDH1-201ENST00000261769 IFNL2Q8IZJ0 200 aa16.89■□□□□ 0.29
CDH1-201ENST00000261769 TEX13AQ9BXU3 409 aaPredicted RBP16.89■□□□□ 0.29
CDH1-201ENST00000261769 NOB1Q9ULX3 412 aaKnown RBP16.89■□□□□ 0.29
CDH1-201ENST00000261769 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
CDH1-201ENST00000261769 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDH1-201ENST00000261769 ABCC11Q96J66 1382 aa16.88■□□□□ 0.29
CDH1-201ENST00000261769 SART3Q15020 963 aaKnown RBP16.87■□□□□ 0.29
CDH1-201ENST00000261769 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 TTC39AQ5SRH9 613 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 USHBP1Q8N6Y0 703 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 BICDL1Q6ZP65 573 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 IGHMBP2P38935 993 aaKnown RBP16.87■□□□□ 0.29
CDH1-201ENST00000261769 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
CDH1-201ENST00000261769 MCTP1Q6DN14 999 aa16.86■□□□□ 0.29
CDH1-201ENST00000261769 PDE4AP27815 886 aa16.86■□□□□ 0.29
CDH1-201ENST00000261769 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
CDH1-201ENST00000261769 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
CDH1-201ENST00000261769 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
CDH1-201ENST00000261769 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
CDH1-201ENST00000261769 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
CDH1-201ENST00000261769 SAFBQ15424 915 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDH1-201ENST00000261769 CDC45O75419 566 aa16.85■□□□□ 0.29
CDH1-201ENST00000261769 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
CDH1-201ENST00000261769 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
CDH1-201ENST00000261769 DUSP27Q5VZP5 1158 aa16.85■□□□□ 0.29
CDH1-201ENST00000261769 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
CDH1-201ENST00000261769 LMTK3Q96Q04 1460 aa16.84■□□□□ 0.29
CDH1-201ENST00000261769 MCM10Q7L590 875 aa16.84■□□□□ 0.29
CDH1-201ENST00000261769 PHF14O94880 888 aa16.84■□□□□ 0.29
CDH1-201ENST00000261769 NEO1Q92859 1461 aa16.84■□□□□ 0.29
CDH1-201ENST00000261769 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
CDH1-201ENST00000261769 PSMA5P28066 241 aa16.84■□□□□ 0.29
CDH1-201ENST00000261769 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
CDH1-201ENST00000261769 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.28
CDH1-201ENST00000261769 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
CDH1-201ENST00000261769 CCDC47Q96A33 483 aaKnown RBP16.82■□□□□ 0.28
CDH1-201ENST00000261769 NACAP1Q9BZK3 213 aa16.82■□□□□ 0.28
CDH1-201ENST00000261769 PBRM1Q86U86 1689 aa16.82■□□□□ 0.28
CDH1-201ENST00000261769 IKQ13123 557 aaPredicted RBP16.82■□□□□ 0.28
CDH1-201ENST00000261769 PUS7Q96PZ0 661 aaKnown RBP16.82■□□□□ 0.28
CDH1-201ENST00000261769 XBP1P17861 261 aa16.81■□□□□ 0.28
CDH1-201ENST00000261769 IPO9Q96P70 1041 aaKnown RBP16.81■□□□□ 0.28
CDH1-201ENST00000261769 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
CDH1-201ENST00000261769 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
CDH1-201ENST00000261769 CCAR1Q8IX12 1150 aaKnown RBP16.81■□□□□ 0.28
CDH1-201ENST00000261769 CCDC43Q96MW1 224 aaKnown RBP16.81■□□□□ 0.28
CDH1-201ENST00000261769 LRRCC1Q9C099 1032 aa16.81■□□□□ 0.28
CDH1-201ENST00000261769 AK7Q96M32 723 aa16.8■□□□□ 0.28
CDH1-201ENST00000261769 SIL1Q9H173 461 aa16.8■□□□□ 0.28
CDH1-201ENST00000261769 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
CDH1-201ENST00000261769 KCNA6P17658 529 aa16.8■□□□□ 0.28
CDH1-201ENST00000261769 C8orf37Q96NL8 207 aa16.8■□□□□ 0.28
CDH1-201ENST00000261769 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
CDH1-201ENST00000261769 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
CDH1-201ENST00000261769 BRMS1Q9HCU9 246 aa16.79■□□□□ 0.28
CDH1-201ENST00000261769 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
CDH1-201ENST00000261769 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
CDH1-201ENST00000261769 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
CDH1-201ENST00000261769 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
CDH1-201ENST00000261769 MIS18AQ9NYP9 233 aa16.78■□□□□ 0.28
CDH1-201ENST00000261769 CREBRFQ8IUR6 639 aa16.78■□□□□ 0.28
CDH1-201ENST00000261769 RBM5P52756 815 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDH1-201ENST00000261769 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
CDH1-201ENST00000261769 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
CDH1-201ENST00000261769 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
CDH1-201ENST00000261769 SMC3Q9UQE7 1217 aa16.78■□□□□ 0.28
CDH1-201ENST00000261769 A0A087WZG4 1122 aa16.78■□□□□ 0.28
CDH1-201ENST00000261769 TMOD2Q9NZR1 351 aa16.78■□□□□ 0.28
CDH1-201ENST00000261769 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.28
CDH1-201ENST00000261769 BCAR3O75815 825 aa16.77■□□□□ 0.28
CDH1-201ENST00000261769 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.28
CDH1-201ENST00000261769 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
CDH1-201ENST00000261769 MSNP26038 577 aaKnown RBP16.77■□□□□ 0.28
CDH1-201ENST00000261769 DCTN1Q14203 1278 aa16.77■□□□□ 0.27
CDH1-201ENST00000261769 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
CDH1-201ENST00000261769 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
CDH1-201ENST00000261769 DDB1Q16531 1140 aa16.76■□□□□ 0.27
CDH1-201ENST00000261769 DDX11L8A8MPP1 907 aa16.75■□□□□ 0.27
CDH1-201ENST00000261769 GZF1Q9H116 711 aaPredicted RBP16.75■□□□□ 0.27
CDH1-201ENST00000261769 AKAP2Q9Y2D5 859 aa16.75■□□□□ 0.27
CDH1-201ENST00000261769 TRMT112Q9UI30 125 aaKnown RBP16.75■□□□□ 0.27
CDH1-201ENST00000261769 HOOK1Q9UJC3 728 aaKnown RBP16.75■□□□□ 0.27
CDH1-201ENST00000261769 SLFN5Q08AF3 891 aa16.75■□□□□ 0.27
CDH1-201ENST00000261769 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
CDH1-201ENST00000261769 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
CDH1-201ENST00000261769 ATP7AQ04656 1500 aa16.74■□□□□ 0.27
CDH1-201ENST00000261769 TPM2P07951 284 aa16.74■□□□□ 0.27
CDH1-201ENST00000261769 TRPM2O94759 1503 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms