RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ORAI2Q96SN7 254 aa25.11■■□□□ 1.61
HOXC13-201ENST00000243056 STRCP1A6NGW2 1772 aa25.1■■□□□ 1.61
HOXC13-201ENST00000243056 SOX12O15370 315 aa25.1■■□□□ 1.61
HOXC13-201ENST00000243056 TRIM44Q96DX7 344 aaPredicted RBP25.1■■□□□ 1.61
HOXC13-201ENST00000243056 PLEKHG3A1L390 1219 aa25.09■■□□□ 1.61
HOXC13-201ENST00000243056 GTF2E1P29083 439 aaPredicted RBP25.09■■□□□ 1.61
HOXC13-201ENST00000243056 ESCO1Q5FWF5 840 aa25.09■■□□□ 1.61
HOXC13-201ENST00000243056 TMEM94Q12767 1356 aa25.09■■□□□ 1.61
HOXC13-201ENST00000243056 XPCQ01831 940 aaPredicted RBP25.08■■□□□ 1.61
HOXC13-201ENST00000243056 NUTM2GQ5VZR2 741 aa25.08■■□□□ 1.61
HOXC13-201ENST00000243056 ADAMTS8Q9UP79 889 aa25.08■■□□□ 1.61
HOXC13-201ENST00000243056 TRAK2O60296 914 aa25.07■■□□□ 1.6
HOXC13-201ENST00000243056 FAM13BQ9NYF5 915 aa25.07■■□□□ 1.6
HOXC13-201ENST00000243056 CDC42BPGQ6DT37 1551 aa25.06■■□□□ 1.6
HOXC13-201ENST00000243056 ADGRL3Q9HAR2 1447 aa25.06■■□□□ 1.6
HOXC13-201ENST00000243056 MAP7D2Q96T17 732 aa25.05■■□□□ 1.6
HOXC13-201ENST00000243056 PRDM10Q9NQV6 1147 aa25.05■■□□□ 1.6
HOXC13-201ENST00000243056 TTC21BQ7Z4L5 1316 aa25.04■■□□□ 1.6
HOXC13-201ENST00000243056 OFD1O75665 1012 aa25.03■■□□□ 1.6
HOXC13-201ENST00000243056 EDC4Q6P2E9 1401 aaKnown RBP25.03■■□□□ 1.6
HOXC13-201ENST00000243056 DDX17Q92841 729 aaKnown RBP25.03■■□□□ 1.6
HOXC13-201ENST00000243056 ZNF692Q9BU19 519 aaPredicted RBP25.03■■□□□ 1.6
HOXC13-201ENST00000243056 FOXO3O43524 673 aa25.02■■□□□ 1.6
HOXC13-201ENST00000243056 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
HOXC13-201ENST00000243056 PHF8Q9UPP1 1060 aa25.02■■□□□ 1.6
HOXC13-201ENST00000243056 RRS1Q15050 365 aaKnown RBP25.01■■□□□ 1.59
HOXC13-201ENST00000243056 ARID3AQ99856 593 aa25.01■■□□□ 1.59
HOXC13-201ENST00000243056 TBC1D2Q9BYX2 928 aa25.01■■□□□ 1.59
HOXC13-201ENST00000243056 C19orf44Q9H6X5 657 aa25.01■■□□□ 1.59
HOXC13-201ENST00000243056 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
HOXC13-201ENST00000243056 USP6P35125 1406 aa25■■□□□ 1.59
HOXC13-201ENST00000243056 TOPAZ1Q8N9V7 1692 aa25■■□□□ 1.59
HOXC13-201ENST00000243056 EMILIN1Q9Y6C2 1016 aa25■■□□□ 1.59
HOXC13-201ENST00000243056 WDR43Q15061 677 aaKnown RBP eCLIP24.99■■□□□ 1.59
HOXC13-201ENST00000243056 NAP1L2Q9ULW6 460 aaPredicted RBP24.99■■□□□ 1.59
HOXC13-201ENST00000243056 FMN2Q9NZ56 1722 aa24.99■■□□□ 1.59
HOXC13-201ENST00000243056 NSD2O96028 1365 aa24.98■■□□□ 1.59
HOXC13-201ENST00000243056 COG3Q96JB2 828 aa24.97■■□□□ 1.59
HOXC13-201ENST00000243056 SPRYD3Q8NCJ5 442 aa24.97■■□□□ 1.59
HOXC13-201ENST00000243056 TERF1P54274 439 aa24.96■■□□□ 1.59
HOXC13-201ENST00000243056 GAS2L3Q86XJ1 694 aa24.96■■□□□ 1.59
HOXC13-201ENST00000243056 ITSN1Q15811 1721 aa24.96■■□□□ 1.59
HOXC13-201ENST00000243056 POLKQ9UBT6 870 aa24.95■■□□□ 1.59
HOXC13-201ENST00000243056 AKAP12Q02952 1782 aa24.95■■□□□ 1.58
HOXC13-201ENST00000243056 ATF3P18847 181 aa24.95■■□□□ 1.58
HOXC13-201ENST00000243056 ISY1Q9ULR0 285 aaKnown RBP24.95■■□□□ 1.58
HOXC13-201ENST00000243056 POLR3AO14802 1390 aaPredicted RBP24.95■■□□□ 1.58
HOXC13-201ENST00000243056 DMTNQ08495 405 aa24.94■■□□□ 1.58
HOXC13-201ENST00000243056 MON2Q7Z3U7 1717 aa24.94■■□□□ 1.58
HOXC13-201ENST00000243056 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.94■■□□□ 1.58
HOXC13-201ENST00000243056 ANKARQ7Z5J8 1434 aa24.94■■□□□ 1.58
HOXC13-201ENST00000243056 CHMP4BQ9H444 224 aaKnown RBP24.94■■□□□ 1.58
HOXC13-201ENST00000243056 PSME1Q06323 249 aa24.93■■□□□ 1.58
HOXC13-201ENST00000243056 UTP14CQ5TAP6 766 aaKnown RBP24.93■■□□□ 1.58
HOXC13-201ENST00000243056 KIF20BQ96Q89 1820 aa24.92■■□□□ 1.58
HOXC13-201ENST00000243056 SSH2Q76I76 1423 aa24.91■■□□□ 1.58
HOXC13-201ENST00000243056 NLRP6P59044 892 aa24.91■■□□□ 1.58
HOXC13-201ENST00000243056 LMOD2Q6P5Q4 547 aa24.91■■□□□ 1.58
HOXC13-201ENST00000243056 ABTB2Q8N961 1025 aa24.91■■□□□ 1.58
HOXC13-201ENST00000243056 CANXP27824 592 aaKnown RBP24.91■■□□□ 1.58
HOXC13-201ENST00000243056 ZSCAN30Q86W11 494 aa24.91■■□□□ 1.58
HOXC13-201ENST00000243056 R3HCC1Q9Y3T6 440 aaKnown RBP24.91■■□□□ 1.58
HOXC13-201ENST00000243056 U2SURPO15042 1029 aaKnown RBP24.9■■□□□ 1.58
HOXC13-201ENST00000243056 C1orf167Q5SNV9 1468 aa24.88■■□□□ 1.57
HOXC13-201ENST00000243056 BLMP54132 1417 aaPredicted RBP24.87■■□□□ 1.57
HOXC13-201ENST00000243056 LRRC7Q96NW7 1537 aa24.87■■□□□ 1.57
HOXC13-201ENST00000243056 NRKQ7Z2Y5 1582 aa24.87■■□□□ 1.57
HOXC13-201ENST00000243056 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
HOXC13-201ENST00000243056 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.57
HOXC13-201ENST00000243056 ZSCAN20P17040 1043 aaPredicted RBP24.86■■□□□ 1.57
HOXC13-201ENST00000243056 CFAP53Q96M91 514 aa24.86■■□□□ 1.57
HOXC13-201ENST00000243056 TBC1D32Q96NH3 1257 aa24.86■■□□□ 1.57
HOXC13-201ENST00000243056 UQCRHLA0A096LP55 91 aa24.85■■□□□ 1.57
HOXC13-201ENST00000243056 UQCRHP07919 91 aa24.85■■□□□ 1.57
HOXC13-201ENST00000243056 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
HOXC13-201ENST00000243056 CHMP5Q9NZZ3 219 aa24.85■■□□□ 1.57
HOXC13-201ENST00000243056 APAF1O14727 1248 aa24.84■■□□□ 1.57
HOXC13-201ENST00000243056 NEUROD2Q15784 382 aa24.84■■□□□ 1.57
HOXC13-201ENST00000243056 ANKRD26Q9UPS8 1709 aa24.84■■□□□ 1.57
HOXC13-201ENST00000243056 MSH6P52701 1360 aa24.84■■□□□ 1.57
HOXC13-201ENST00000243056 MST1RQ04912 1400 aa24.84■■□□□ 1.57
HOXC13-201ENST00000243056 RRP7AQ9Y3A4 280 aaKnown RBP24.84■■□□□ 1.57
HOXC13-201ENST00000243056 IGHDP01880 384 aa24.83■■□□□ 1.57
HOXC13-201ENST00000243056 MAP2P11137 1827 aaKnown RBP24.83■■□□□ 1.56
HOXC13-201ENST00000243056 XIRP1Q702N8 1843 aaKnown RBP24.83■■□□□ 1.56
HOXC13-201ENST00000243056 PPP1R9BQ96SB3 815 aa24.83■■□□□ 1.56
HOXC13-201ENST00000243056 OVOS2A0A0J9YW53 1432 aa24.82■■□□□ 1.56
HOXC13-201ENST00000243056 OVOS2Q6IE36 1432 aa24.82■■□□□ 1.56
HOXC13-201ENST00000243056 CCDC173Q0VFZ6 552 aa24.82■■□□□ 1.56
HOXC13-201ENST00000243056 CADPS2Q86UW7 1296 aa24.82■■□□□ 1.56
HOXC13-201ENST00000243056 DDX11L8A8MPP1 907 aa24.82■■□□□ 1.56
HOXC13-201ENST00000243056 PPP4R3BQ5MIZ7 849 aa24.82■■□□□ 1.56
HOXC13-201ENST00000243056 KRT28Q7Z3Y7 464 aa24.82■■□□□ 1.56
HOXC13-201ENST00000243056 ZBTB7CA1YPR0 619 aa24.81■■□□□ 1.56
HOXC13-201ENST00000243056 TTC21AQ8NDW8 1320 aa24.81■■□□□ 1.56
HOXC13-201ENST00000243056 MSNP26038 577 aaKnown RBP24.81■■□□□ 1.56
HOXC13-201ENST00000243056 MTERF4Q7Z6M4 381 aaKnown RBP24.81■■□□□ 1.56
HOXC13-201ENST00000243056 SHPRHQ149N8 1683 aa24.8■■□□□ 1.56
HOXC13-201ENST00000243056 HSP90AB2PQ58FF8 381 aa24.8■■□□□ 1.56
HOXC13-201ENST00000243056 DIAPH1O60610 1272 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms