RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRIM23-201ENST00000231524 MINK1Q8N4C8 1332 aaPredicted RBP11.77□□□□□ -0.53
TRIM23-201ENST00000231524 INSRP06213 1382 aa11.77□□□□□ -0.53
TRIM23-201ENST00000231524 LETM1O95202 739 aaPredicted RBP11.77□□□□□ -0.53
TRIM23-201ENST00000231524 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.53
TRIM23-201ENST00000231524 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
TRIM23-201ENST00000231524 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
TRIM23-201ENST00000231524 ZNF445P59923 1031 aa11.76□□□□□ -0.53
TRIM23-201ENST00000231524 STK31Q9BXU1 1019 aa11.76□□□□□ -0.53
TRIM23-201ENST00000231524 WDR33Q9C0J8 1336 aaKnown RBP11.76□□□□□ -0.53
TRIM23-201ENST00000231524 FANCAO15360 1455 aa11.76□□□□□ -0.53
TRIM23-201ENST00000231524 HCLS1P14317 486 aaPredicted RBP11.75□□□□□ -0.53
TRIM23-201ENST00000231524 ASXL2Q76L83 1435 aa11.75□□□□□ -0.53
TRIM23-201ENST00000231524 C17orf53Q8N3J3 647 aaPredicted RBP11.75□□□□□ -0.53
TRIM23-201ENST00000231524 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
TRIM23-201ENST00000231524 ZNF500O60304 480 aaPredicted RBP11.75□□□□□ -0.53
TRIM23-201ENST00000231524 PDE4CQ08493 712 aa11.75□□□□□ -0.53
TRIM23-201ENST00000231524 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
TRIM23-201ENST00000231524 ZBTB40Q9NUA8 1239 aa11.74□□□□□ -0.53
TRIM23-201ENST00000231524 COL17A1Q9UMD9 1497 aaPredicted RBP11.74□□□□□ -0.53
TRIM23-201ENST00000231524 CARD14Q9BXL6 1004 aa11.74□□□□□ -0.53
TRIM23-201ENST00000231524 GTPBP4Q9BZE4 634 aaKnown RBP11.74□□□□□ -0.53
TRIM23-201ENST00000231524 LMBRD1Q9NUN5 540 aa11.74□□□□□ -0.53
TRIM23-201ENST00000231524 CD2BP2O95400 341 aaKnown RBP11.73□□□□□ -0.53
TRIM23-201ENST00000231524 CCDC192P0DO97 292 aa11.73□□□□□ -0.53
TRIM23-201ENST00000231524 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
TRIM23-201ENST00000231524 TRERF1Q96PN7 1200 aa11.73□□□□□ -0.53
TRIM23-201ENST00000231524 PIK3C2GO75747 1445 aa11.73□□□□□ -0.53
TRIM23-201ENST00000231524 TAF3Q5VWG9 929 aa11.73□□□□□ -0.53
TRIM23-201ENST00000231524 C16orf45Q96MC5 204 aaPredicted RBP11.73□□□□□ -0.53
TRIM23-201ENST00000231524 ASXL1Q8IXJ9 1541 aa11.73□□□□□ -0.53
TRIM23-201ENST00000231524 TRAPPC8Q9Y2L5 1435 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 CHAMP1Q96JM3 812 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 PLCH2O75038 1416 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 PKP1Q13835 747 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 HOMER1Q86YM7 354 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
TRIM23-201ENST00000231524 MYRIPQ8NFW9 859 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.72□□□□□ -0.53
TRIM23-201ENST00000231524 BCORL1Q5H9F3 1711 aa11.72□□□□□ -0.53
TRIM23-201ENST00000231524 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
TRIM23-201ENST00000231524 TMX3Q96JJ7 454 aa11.71□□□□□ -0.53
TRIM23-201ENST00000231524 TMEM63CQ9P1W3 806 aa11.71□□□□□ -0.53
TRIM23-201ENST00000231524 KDM5CP41229 1560 aa11.71□□□□□ -0.53
TRIM23-201ENST00000231524 TEX35Q5T0J7 233 aa11.71□□□□□ -0.53
TRIM23-201ENST00000231524 ARHGEF12Q9NZN5 1544 aa11.71□□□□□ -0.53
TRIM23-201ENST00000231524 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.54
TRIM23-201ENST00000231524 CCAR2Q8N163 923 aaKnown RBP11.71□□□□□ -0.54
TRIM23-201ENST00000231524 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.54
TRIM23-201ENST00000231524 EID1Q9Y6B2 187 aa11.71□□□□□ -0.54
TRIM23-201ENST00000231524 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
TRIM23-201ENST00000231524 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
TRIM23-201ENST00000231524 H3BQV1 296 aa11.7□□□□□ -0.54
TRIM23-201ENST00000231524 CAMK4Q16566 473 aa11.7□□□□□ -0.54
TRIM23-201ENST00000231524 IFFO2Q5TF58 517 aa11.7□□□□□ -0.54
TRIM23-201ENST00000231524 ITSN2Q9NZM3 1697 aa11.7□□□□□ -0.54
TRIM23-201ENST00000231524 SDSP20132 328 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.544e-7■■■■■ 30.7
TRIM23-201ENST00000231524 TTC22Q5TAA0 569 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 GIMAP6Q6P9H5 292 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 KIF20AO95235 890 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 TNNT1P13805 278 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 GCC2Q8IWJ2 1684 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 GORABQ5T7V8 394 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
TRIM23-201ENST00000231524 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
TRIM23-201ENST00000231524 UVSSAQ2YD98 709 aa11.68□□□□□ -0.54
TRIM23-201ENST00000231524 USP48Q86UV5 1035 aa11.68□□□□□ -0.54
TRIM23-201ENST00000231524 ZNF428Q96B54 188 aa11.68□□□□□ -0.54
TRIM23-201ENST00000231524 EXOC6BQ9Y2D4 811 aa11.68□□□□□ -0.54
TRIM23-201ENST00000231524 POLR3AO14802 1390 aaPredicted RBP11.68□□□□□ -0.54
TRIM23-201ENST00000231524 SCAF11Q99590 1463 aaKnown RBP11.68□□□□□ -0.54
TRIM23-201ENST00000231524 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
TRIM23-201ENST00000231524 RPAP2Q8IXW5 612 aaPredicted RBP11.68□□□□□ -0.54
TRIM23-201ENST00000231524 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
TRIM23-201ENST00000231524 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
TRIM23-201ENST00000231524 FILIP1Q7Z7B0 1213 aa11.68□□□□□ -0.54
TRIM23-201ENST00000231524 TNMDQ9H2S6 317 aa11.68□□□□□ -0.54
TRIM23-201ENST00000231524 ADGRF5Q8IZF2 1346 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
TRIM23-201ENST00000231524 TSHZ3Q63HK5 1081 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 USP26Q9BXU7 913 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 TPM4P67936 248 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 GPS2Q13227 327 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 PIBF1Q8WXW3 757 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 CHD1O14646 1710 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 MNS1Q8NEH6 495 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 GPT2Q8TD30 523 aa11.67□□□□□ -0.54
TRIM23-201ENST00000231524 DMTNQ08495 405 aa11.66□□□□□ -0.54
TRIM23-201ENST00000231524 ERCC6L2Q5T890 1561 aa11.66□□□□□ -0.54
TRIM23-201ENST00000231524 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
TRIM23-201ENST00000231524 NUP62CLQ9H1M0 184 aa11.66□□□□□ -0.54
TRIM23-201ENST00000231524 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
TRIM23-201ENST00000231524 VGLL3A8MV65 326 aa11.66□□□□□ -0.54
TRIM23-201ENST00000231524 SF3A1Q15459 793 aaKnown RBP11.66□□□□□ -0.54
TRIM23-201ENST00000231524 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
TRIM23-201ENST00000231524 FOSBP53539 338 aa11.65□□□□□ -0.54
TRIM23-201ENST00000231524 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms