RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 EMILIN1Q9Y6C2 1016 aa19.33■□□□□ 0.69
TGFB1-201ENST00000221930 ADAMTS13Q76LX8 1427 aa19.33■□□□□ 0.68
TGFB1-201ENST00000221930 HDAC1Q13547 482 aaPredicted RBP19.32■□□□□ 0.68
TGFB1-201ENST00000221930 ZRANB1Q9UGI0 708 aa19.32■□□□□ 0.68
TGFB1-201ENST00000221930 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
TGFB1-201ENST00000221930 TOPAZ1Q8N9V7 1692 aa19.31■□□□□ 0.68
TGFB1-201ENST00000221930 NCKAP5LQ9HCH0 1330 aa19.31■□□□□ 0.68
TGFB1-201ENST00000221930 SPRYD3Q8NCJ5 442 aa19.31■□□□□ 0.68
TGFB1-201ENST00000221930 TBC1D2Q9BYX2 928 aa19.31■□□□□ 0.68
TGFB1-201ENST00000221930 LRRC7Q96NW7 1537 aa19.31■□□□□ 0.68
TGFB1-201ENST00000221930 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
TGFB1-201ENST00000221930 RIMS1Q86UR5 1692 aaKnown RBP19.31■□□□□ 0.68
TGFB1-201ENST00000221930 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
TGFB1-201ENST00000221930 NME9Q86XW9 330 aa19.31■□□□□ 0.68
TGFB1-201ENST00000221930 KIF16BQ96L93 1317 aa19.3■□□□□ 0.68
TGFB1-201ENST00000221930 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
TGFB1-201ENST00000221930 ELL2O00472 640 aaPredicted RBP19.3■□□□□ 0.68
TGFB1-201ENST00000221930 IPO8O15397 1037 aaKnown RBP19.3■□□□□ 0.68
TGFB1-201ENST00000221930 CPSF1Q10570 1443 aaKnown RBP19.29■□□□□ 0.68
TGFB1-201ENST00000221930 FAM43AQ8N2R8 423 aa19.29■□□□□ 0.68
TGFB1-201ENST00000221930 METP08581 1390 aa19.29■□□□□ 0.68
TGFB1-201ENST00000221930 TXNDC2Q86VQ3 553 aa19.28■□□□□ 0.68
TGFB1-201ENST00000221930 SMC5Q8IY18 1101 aa19.28■□□□□ 0.68
TGFB1-201ENST00000221930 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
TGFB1-201ENST00000221930 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
TGFB1-201ENST00000221930 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
TGFB1-201ENST00000221930 ANTXR1Q9H6X2 564 aa19.27■□□□□ 0.68
TGFB1-201ENST00000221930 NFE2L2Q16236 605 aa19.27■□□□□ 0.67
TGFB1-201ENST00000221930 ALDH1L2Q3SY69 923 aa19.27■□□□□ 0.67
TGFB1-201ENST00000221930 LNPKQ9C0E8 428 aa19.27■□□□□ 0.67
TGFB1-201ENST00000221930 RRS1Q15050 365 aaKnown RBP19.26■□□□□ 0.67
TGFB1-201ENST00000221930 C22orf23Q9BZE7 217 aa19.26■□□□□ 0.67
TGFB1-201ENST00000221930 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
TGFB1-201ENST00000221930 C1orf115Q9H7X2 142 aa19.25■□□□□ 0.67
TGFB1-201ENST00000221930 MAP2P11137 1827 aaKnown RBP19.25■□□□□ 0.67
TGFB1-201ENST00000221930 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
TGFB1-201ENST00000221930 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
TGFB1-201ENST00000221930 VAMP4O75379 141 aa19.24■□□□□ 0.67
TGFB1-201ENST00000221930 IL13P35225 146 aa19.24■□□□□ 0.67
TGFB1-201ENST00000221930 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
TGFB1-201ENST00000221930 ADAMTSL3P82987 1691 aa19.23■□□□□ 0.67
TGFB1-201ENST00000221930 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
TGFB1-201ENST00000221930 NRKQ7Z2Y5 1582 aa19.23■□□□□ 0.67
TGFB1-201ENST00000221930 CEP170BQ9Y4F5 1589 aaPredicted RBP19.23■□□□□ 0.67
TGFB1-201ENST00000221930 FAM83GA6ND36 823 aa19.22■□□□□ 0.67
TGFB1-201ENST00000221930 MBIPQ9NS73 344 aa19.22■□□□□ 0.67
TGFB1-201ENST00000221930 NUDT16Q96DE0 195 aaKnown RBP19.22■□□□□ 0.67
TGFB1-201ENST00000221930 NUCB1Q02818 461 aa19.21■□□□□ 0.67
TGFB1-201ENST00000221930 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.21■□□□□ 0.67
TGFB1-201ENST00000221930 TBX22Q9Y458 520 aa19.21■□□□□ 0.67
TGFB1-201ENST00000221930 DCTN1Q14203 1278 aa19.21■□□□□ 0.67
TGFB1-201ENST00000221930 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
TGFB1-201ENST00000221930 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
TGFB1-201ENST00000221930 CHD1LQ86WJ1 897 aa19.2■□□□□ 0.66
TGFB1-201ENST00000221930 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
TGFB1-201ENST00000221930 AATKQ6ZMQ8 1374 aa19.2■□□□□ 0.66
TGFB1-201ENST00000221930 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
TGFB1-201ENST00000221930 COG3Q96JB2 828 aa19.2■□□□□ 0.66
TGFB1-201ENST00000221930 GNAI1P63096 354 aa19.19■□□□□ 0.66
TGFB1-201ENST00000221930 ANKRD45Q5TZF3 282 aa19.18■□□□□ 0.66
TGFB1-201ENST00000221930 C8orf58Q8NAV2 365 aa19.18■□□□□ 0.66
TGFB1-201ENST00000221930 IFT57Q9NWB7 429 aa19.18■□□□□ 0.66
TGFB1-201ENST00000221930 CCDC61Q9Y6R9 512 aa19.18■□□□□ 0.66
TGFB1-201ENST00000221930 ZNF428Q96B54 188 aa19.18■□□□□ 0.66
TGFB1-201ENST00000221930 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
TGFB1-201ENST00000221930 TWISTNBQ3B726 338 aaPredicted RBP19.17■□□□□ 0.66
TGFB1-201ENST00000221930 BRPF1P55201 1214 aaPredicted RBP19.17■□□□□ 0.66
TGFB1-201ENST00000221930 CALD1Q05682 793 aaKnown RBP19.17■□□□□ 0.66
TGFB1-201ENST00000221930 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
TGFB1-201ENST00000221930 ZNF853P0CG23 659 aa19.16■□□□□ 0.66
TGFB1-201ENST00000221930 CDK12Q9NYV4 1490 aaPredicted RBP19.16■□□□□ 0.66
TGFB1-201ENST00000221930 NALCNQ8IZF0 1738 aa19.16■□□□□ 0.66
TGFB1-201ENST00000221930 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
TGFB1-201ENST00000221930 SIRT2Q8IXJ6 389 aa19.15■□□□□ 0.66
TGFB1-201ENST00000221930 CFAP44Q96MT7 982 aa19.15■□□□□ 0.66
TGFB1-201ENST00000221930 RRP9O43818 475 aaKnown RBP19.14■□□□□ 0.65
TGFB1-201ENST00000221930 FGD1P98174 961 aa19.14■□□□□ 0.65
TGFB1-201ENST00000221930 AEBP1Q8IUX7 1158 aa19.14■□□□□ 0.65
TGFB1-201ENST00000221930 USP54Q70EL1 1684 aa19.14■□□□□ 0.65
TGFB1-201ENST00000221930 SETD1BQ9UPS6 1966 aaKnown RBP19.14■□□□□ 0.65
TGFB1-201ENST00000221930 LTKP29376 864 aa19.14■□□□□ 0.65
TGFB1-201ENST00000221930 ARHGAP45Q92619 1136 aa19.14■□□□□ 0.65
TGFB1-201ENST00000221930 PRR36Q9H6K5 1346 aa19.13■□□□□ 0.65
TGFB1-201ENST00000221930 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
TGFB1-201ENST00000221930 ANKARQ7Z5J8 1434 aa19.12■□□□□ 0.65
TGFB1-201ENST00000221930 PLEKHG3A1L390 1219 aa19.11■□□□□ 0.65
TGFB1-201ENST00000221930 KRT24Q2M2I5 525 aa19.11■□□□□ 0.65
TGFB1-201ENST00000221930 ABCC4O15439 1325 aa19.11■□□□□ 0.65
TGFB1-201ENST00000221930 SOX12O15370 315 aa19.1■□□□□ 0.65
TGFB1-201ENST00000221930 SULT6B1Q6IMI4 303 aa19.1■□□□□ 0.65
TGFB1-201ENST00000221930 GCC1Q96CN9 775 aa19.1■□□□□ 0.65
TGFB1-201ENST00000221930 LMOD3Q0VAK6 560 aa19.1■□□□□ 0.65
TGFB1-201ENST00000221930 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
TGFB1-201ENST00000221930 ARXQ96QS3 562 aa19.1■□□□□ 0.65
TGFB1-201ENST00000221930 CHD2O14647 1828 aaKnown RBP19.1■□□□□ 0.65
TGFB1-201ENST00000221930 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
TGFB1-201ENST00000221930 HSP90AA2PQ14568 343 aaPredicted RBP19.1■□□□□ 0.65
TGFB1-201ENST00000221930 BMP2KLQ5H9B9 411 aa19.1■□□□□ 0.65
TGFB1-201ENST00000221930 DLG5Q8TDM6 1919 aa19.08■□□□□ 0.65
TGFB1-201ENST00000221930 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms