RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
SRP54-201ENST00000216774 IL13P35225 146 aa16.7■□□□□ 0.26
SRP54-201ENST00000216774 SNX21Q969T3 373 aa16.7■□□□□ 0.26
SRP54-201ENST00000216774 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
SRP54-201ENST00000216774 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
SRP54-201ENST00000216774 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
SRP54-201ENST00000216774 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
SRP54-201ENST00000216774 ABCC4O15439 1325 aa16.69■□□□□ 0.26
SRP54-201ENST00000216774 HMOX1P09601 288 aa16.68■□□□□ 0.26
SRP54-201ENST00000216774 WASLO00401 505 aaPredicted RBP16.67■□□□□ 0.26
SRP54-201ENST00000216774 SPRYD3Q8NCJ5 442 aa16.67■□□□□ 0.26
SRP54-201ENST00000216774 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
SRP54-201ENST00000216774 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
SRP54-201ENST00000216774 FBLN1P23142 703 aa16.66■□□□□ 0.26
SRP54-201ENST00000216774 DDIT3P35638 169 aa16.66■□□□□ 0.26
SRP54-201ENST00000216774 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
SRP54-201ENST00000216774 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
SRP54-201ENST00000216774 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
SRP54-201ENST00000216774 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
SRP54-201ENST00000216774 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
SRP54-201ENST00000216774 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
SRP54-201ENST00000216774 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
SRP54-201ENST00000216774 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
SRP54-201ENST00000216774 API5Q9BZZ5 524 aaKnown RBP16.65■□□□□ 0.26
SRP54-201ENST00000216774 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
SRP54-201ENST00000216774 DDX11L8A8MPP1 907 aa16.64■□□□□ 0.25
SRP54-201ENST00000216774 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
SRP54-201ENST00000216774 NME9Q86XW9 330 aa16.64■□□□□ 0.25
SRP54-201ENST00000216774 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
SRP54-201ENST00000216774 SIRT1Q96EB6 747 aa16.63■□□□□ 0.25
SRP54-201ENST00000216774 COG3Q96JB2 828 aa16.63■□□□□ 0.25
SRP54-201ENST00000216774 CIZ1Q9ULV3 898 aaPredicted RBP16.63■□□□□ 0.25
SRP54-201ENST00000216774 KNDC1Q76NI1 1749 aa16.63■□□□□ 0.25
SRP54-201ENST00000216774 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
SRP54-201ENST00000216774 TECPR2O15040 1411 aa16.62■□□□□ 0.25
SRP54-201ENST00000216774 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
SRP54-201ENST00000216774 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
SRP54-201ENST00000216774 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
SRP54-201ENST00000216774 TRAK2O60296 914 aa16.62■□□□□ 0.25
SRP54-201ENST00000216774 SIRT2Q8IXJ6 389 aa16.62■□□□□ 0.25
SRP54-201ENST00000216774 C3P01024 1663 aa16.61■□□□□ 0.25
SRP54-201ENST00000216774 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
SRP54-201ENST00000216774 AKAP12Q02952 1782 aa16.61■□□□□ 0.25
SRP54-201ENST00000216774 CPS1P31327 1500 aa16.61■□□□□ 0.25
SRP54-201ENST00000216774 NUDT16Q96DE0 195 aaKnown RBP16.61■□□□□ 0.25
SRP54-201ENST00000216774 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
SRP54-201ENST00000216774 NRKQ7Z2Y5 1582 aa16.61■□□□□ 0.25
SRP54-201ENST00000216774 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
SRP54-201ENST00000216774 METP08581 1390 aa16.6■□□□□ 0.25
SRP54-201ENST00000216774 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
SRP54-201ENST00000216774 KIF2CQ99661 725 aa16.6■□□□□ 0.25
SRP54-201ENST00000216774 TBC1D9Q6ZT07 1266 aa16.59■□□□□ 0.25
SRP54-201ENST00000216774 ELL2O00472 640 aaPredicted RBP16.59■□□□□ 0.25
SRP54-201ENST00000216774 HAP1P54257 671 aaPredicted RBP16.59■□□□□ 0.25
SRP54-201ENST00000216774 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
SRP54-201ENST00000216774 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.25
SRP54-201ENST00000216774 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.25
SRP54-201ENST00000216774 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.25
SRP54-201ENST00000216774 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
SRP54-201ENST00000216774 FAM69CQ0P6D2 419 aa16.58■□□□□ 0.24
SRP54-201ENST00000216774 CDC45O75419 566 aa16.57■□□□□ 0.24
SRP54-201ENST00000216774 RRS1Q15050 365 aaKnown RBP16.57■□□□□ 0.24
SRP54-201ENST00000216774 INTS3Q68E01 1043 aaKnown RBP16.57■□□□□ 0.24
SRP54-201ENST00000216774 PTMSP20962 102 aa16.56■□□□□ 0.24
SRP54-201ENST00000216774 TXNDC2Q86VQ3 553 aa16.56■□□□□ 0.24
SRP54-201ENST00000216774 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
SRP54-201ENST00000216774 RAB3GAP1Q15042 981 aa16.56■□□□□ 0.24
SRP54-201ENST00000216774 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
SRP54-201ENST00000216774 GZF1Q9H116 711 aaPredicted RBP16.56■□□□□ 0.24
SRP54-201ENST00000216774 DCTPP1Q9H773 170 aa16.56■□□□□ 0.24
SRP54-201ENST00000216774 MRE11P49959 708 aa16.55■□□□□ 0.24
SRP54-201ENST00000216774 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
SRP54-201ENST00000216774 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
SRP54-201ENST00000216774 TNPO1Q92973 898 aaKnown RBP16.54■□□□□ 0.24
SRP54-201ENST00000216774 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
SRP54-201ENST00000216774 SKOR2Q2VWA4 1001 aaPredicted RBP16.53■□□□□ 0.24
SRP54-201ENST00000216774 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
SRP54-201ENST00000216774 RGS12O14924 1447 aa16.52■□□□□ 0.24
SRP54-201ENST00000216774 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
SRP54-201ENST00000216774 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.23
SRP54-201ENST00000216774 ATP10DQ9P241 1426 aa16.52■□□□□ 0.23
SRP54-201ENST00000216774 CHL1O00533 1208 aa16.52■□□□□ 0.23
SRP54-201ENST00000216774 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.23
SRP54-201ENST00000216774 GSPT1P15170 499 aaKnown RBP16.52■□□□□ 0.23
SRP54-201ENST00000216774 DCTN1Q14203 1278 aa16.52■□□□□ 0.23
SRP54-201ENST00000216774 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.23
SRP54-201ENST00000216774 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.23
SRP54-201ENST00000216774 PTPRCP08575 1304 aa16.51■□□□□ 0.23
SRP54-201ENST00000216774 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
SRP54-201ENST00000216774 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
SRP54-201ENST00000216774 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
SRP54-201ENST00000216774 TTC22Q5TAA0 569 aa16.5■□□□□ 0.23
SRP54-201ENST00000216774 OVOS2A0A0J9YW53 1432 aa16.5■□□□□ 0.23
SRP54-201ENST00000216774 OVOS2Q6IE36 1432 aa16.5■□□□□ 0.23
SRP54-201ENST00000216774 TSPOAP1O95153 1857 aa16.5■□□□□ 0.23
SRP54-201ENST00000216774 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
SRP54-201ENST00000216774 TOPAZ1Q8N9V7 1692 aa16.49■□□□□ 0.23
SRP54-201ENST00000216774 RABEP1Q15276 862 aa16.49■□□□□ 0.23
SRP54-201ENST00000216774 CLEC17AQ6ZS10 378 aa16.49■□□□□ 0.23
SRP54-201ENST00000216774 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms