RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 CCDC57Q2TAC2 916 aa27.7■■■□□ 2.03
TARBP1-201ENST00000040877 TMPOP42166 694 aaKnown RBP27.7■■■□□ 2.03
TARBP1-201ENST00000040877 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
TARBP1-201ENST00000040877 FOSBP53539 338 aa27.69■■■□□ 2.02
TARBP1-201ENST00000040877 KLHL34Q8N239 644 aa27.69■■■□□ 2.02
TARBP1-201ENST00000040877 PRM3Q9NNZ6 103 aa27.68■■■□□ 2.02
TARBP1-201ENST00000040877 HOMER1Q86YM7 354 aa27.68■■■□□ 2.02
TARBP1-201ENST00000040877 CYP46A1Q9Y6A2 500 aa27.67■■■□□ 2.02
TARBP1-201ENST00000040877 ZNF396Q96N95 335 aaPredicted RBP27.67■■■□□ 2.02
TARBP1-201ENST00000040877 MPHOSPH8Q99549 860 aa27.67■■■□□ 2.02
TARBP1-201ENST00000040877 NCOA1Q15788 1441 aa27.66■■■□□ 2.02
TARBP1-201ENST00000040877 FAM135AQ9P2D6 1515 aa27.65■■■□□ 2.02
TARBP1-201ENST00000040877 SLFN5Q08AF3 891 aa27.65■■■□□ 2.02
TARBP1-201ENST00000040877 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
TARBP1-201ENST00000040877 IKQ13123 557 aaPredicted RBP27.65■■■□□ 2.02
TARBP1-201ENST00000040877 CHD1LQ86WJ1 897 aa27.64■■■□□ 2.02
TARBP1-201ENST00000040877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.64■■■□□ 2.01
TARBP1-201ENST00000040877 SRGAP3O43295 1099 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 KINO60870 393 aaKnown RBP27.63■■■□□ 2.01
TARBP1-201ENST00000040877 MYL6BP14649 208 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 NFKBIBQ15653 356 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 AEBP1Q8IUX7 1158 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 CEP126Q9P2H0 1117 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 DENND4BO75064 1496 aaPredicted RBP27.63■■■□□ 2.01
TARBP1-201ENST00000040877 SF3B2Q13435 895 aaKnown RBP27.63■■■□□ 2.01
TARBP1-201ENST00000040877 AMOTQ4VCS5 1084 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 JMYQ8N9B5 988 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 ZNF592Q92610 1267 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 MRE11P49959 708 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 TXLNAP40222 546 aa27.63■■■□□ 2.01
TARBP1-201ENST00000040877 NUTM2BA6NNL0 878 aaPredicted RBP27.62■■■□□ 2.01
TARBP1-201ENST00000040877 NUTM2EB1AL46 878 aaPredicted RBP27.62■■■□□ 2.01
TARBP1-201ENST00000040877 NUTM2AQ8IVF1 878 aaPredicted RBP27.62■■■□□ 2.01
TARBP1-201ENST00000040877 IFT57Q9NWB7 429 aa27.61■■■□□ 2.01
TARBP1-201ENST00000040877 STARD3NLO95772 234 aa27.61■■■□□ 2.01
TARBP1-201ENST00000040877 PHF23Q9BUL5 403 aaPredicted RBP27.61■■■□□ 2.01
TARBP1-201ENST00000040877 SAMD1Q6SPF0 538 aaPredicted RBP27.6■■■□□ 2.01
TARBP1-201ENST00000040877 TRIM22Q8IYM9 498 aa27.6■■■□□ 2.01
TARBP1-201ENST00000040877 CTNNA3Q9UI47 895 aa27.6■■■□□ 2.01
TARBP1-201ENST00000040877 SIL1Q9H173 461 aa27.6■■■□□ 2.01
TARBP1-201ENST00000040877 NSD2O96028 1365 aa27.59■■■□□ 2.01
TARBP1-201ENST00000040877 WAPLQ7Z5K2 1190 aa27.59■■■□□ 2.01
TARBP1-201ENST00000040877 ALDH1L2Q3SY69 923 aa27.59■■■□□ 2.01
TARBP1-201ENST00000040877 RRP12Q5JTH9 1297 aaKnown RBP27.59■■■□□ 2.01
TARBP1-201ENST00000040877 ZC3H6P61129 1189 aaKnown RBP27.59■■■□□ 2.01
TARBP1-201ENST00000040877 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
TARBP1-201ENST00000040877 AACSQ86V21 672 aa27.58■■■□□ 2.01
TARBP1-201ENST00000040877 PDIA4P13667 645 aaKnown RBP27.58■■■□□ 2.01
TARBP1-201ENST00000040877 PIP4K2AP48426 406 aaPredicted RBP27.58■■■□□ 2.01
TARBP1-201ENST00000040877 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.58■■■□□ 2.01
TARBP1-201ENST00000040877 R3HCC1Q9Y3T6 440 aaKnown RBP27.57■■■□□ 2
TARBP1-201ENST00000040877 WASLO00401 505 aaPredicted RBP27.57■■■□□ 2
TARBP1-201ENST00000040877 KRT32Q14532 448 aa27.57■■■□□ 2
TARBP1-201ENST00000040877 FANCAO15360 1455 aa27.57■■■□□ 2
TARBP1-201ENST00000040877 STK38Q15208 465 aa27.56■■■□□ 2
TARBP1-201ENST00000040877 PHF8Q9UPP1 1060 aa27.56■■■□□ 2
TARBP1-201ENST00000040877 SCAF11Q99590 1463 aaKnown RBP27.56■■■□□ 2
TARBP1-201ENST00000040877 EPS15P42566 896 aa27.55■■■□□ 2
TARBP1-201ENST00000040877 FAM13BQ9NYF5 915 aa27.55■■■□□ 2
TARBP1-201ENST00000040877 MTMR7Q9Y216 660 aa27.55■■■□□ 2
TARBP1-201ENST00000040877 CCDC39Q9UFE4 941 aa27.55■■■□□ 2
TARBP1-201ENST00000040877 WDR33Q9C0J8 1336 aaKnown RBP27.55■■■□□ 2
TARBP1-201ENST00000040877 IDI1Q13907 227 aa27.55■■■□□ 2
TARBP1-201ENST00000040877 DHX29Q7Z478 1369 aaKnown RBP27.54■■■□□ 2
TARBP1-201ENST00000040877 TRAK2O60296 914 aa27.54■■■□□ 2
TARBP1-201ENST00000040877 DUSP27Q5VZP5 1158 aa27.54■■■□□ 2
TARBP1-201ENST00000040877 CDK5RAP3Q96JB5 506 aa27.54■■■□□ 2
TARBP1-201ENST00000040877 OFD1O75665 1012 aa27.54■■■□□ 2
TARBP1-201ENST00000040877 NASPP49321 788 aaPredicted RBP27.54■■■□□ 2
TARBP1-201ENST00000040877 ZSCAN31Q96LW9 406 aaPredicted RBP27.54■■■□□ 2
TARBP1-201ENST00000040877 XPCQ01831 940 aaPredicted RBP27.53■■■□□ 2
TARBP1-201ENST00000040877 TAF7Q15545 349 aaPredicted RBP27.53■■■□□ 2
TARBP1-201ENST00000040877 AMOTL2Q9Y2J4 779 aa27.53■■■□□ 2
TARBP1-201ENST00000040877 LARP1Q6PKG0 1096 aaKnown RBP27.53■■■□□ 2
TARBP1-201ENST00000040877 BACH2Q9BYV9 841 aa27.53■■■□□ 2
TARBP1-201ENST00000040877 DCAF8L1A6NGE4 600 aa27.52■■■□□ 2
TARBP1-201ENST00000040877 CDKL5O76039 1030 aa27.52■■■□□ 2
TARBP1-201ENST00000040877 BLOC1S2Q6QNY1 142 aa27.52■■■□□ 2
TARBP1-201ENST00000040877 ADGRF5Q8IZF2 1346 aa27.52■■■□□ 2
TARBP1-201ENST00000040877 K7ELQ4 463 aaPredicted RBP27.52■■■□□ 2
TARBP1-201ENST00000040877 FAM43AQ8N2R8 423 aa27.52■■■□□ 2
TARBP1-201ENST00000040877 RAB11FIP3O75154 756 aa27.52■■■□□ 2
TARBP1-201ENST00000040877 IGHMBP2P38935 993 aaKnown RBP27.51■■□□□ 1.99
TARBP1-201ENST00000040877 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
TARBP1-201ENST00000040877 DHX8Q14562 1220 aaKnown RBP27.51■■□□□ 1.99
TARBP1-201ENST00000040877 ZNF652Q9Y2D9 606 aa27.51■■□□□ 1.99
TARBP1-201ENST00000040877 RPRD2Q5VT52 1461 aaKnown RBP27.51■■□□□ 1.99
TARBP1-201ENST00000040877 FILIP1LQ4L180 1135 aa27.51■■□□□ 1.99
TARBP1-201ENST00000040877 CCDC69A6NI79 296 aa27.5■■□□□ 1.99
TARBP1-201ENST00000040877 KIF1BPQ96EK5 621 aa27.5■■□□□ 1.99
TARBP1-201ENST00000040877 LRPPRCP42704 1394 aaKnown RBP27.5■■□□□ 1.99
TARBP1-201ENST00000040877 CT47A1Q5JQC4 288 aaPredicted RBP27.5■■□□□ 1.99
TARBP1-201ENST00000040877 TTC21BQ7Z4L5 1316 aa27.49■■□□□ 1.99
TARBP1-201ENST00000040877 ATP2B1P20020 1258 aa27.49■■□□□ 1.99
TARBP1-201ENST00000040877 TMEM57Q8N5G2 664 aa27.49■■□□□ 1.99
TARBP1-201ENST00000040877 C14orf93Q9H972 538 aaKnown RBP27.49■■□□□ 1.99
TARBP1-201ENST00000040877 FKBP4Q02790 459 aaKnown RBP eCLIP27.48■■□□□ 1.993e-6■■■■■ 27.3
TARBP1-201ENST00000040877 ARGLU1Q9NWB6 273 aaPredicted RBP27.48■■□□□ 1.99
TARBP1-201ENST00000040877 MNS1Q8NEH6 495 aa27.48■■□□□ 1.99
TARBP1-201ENST00000040877 TMOD3Q9NYL9 352 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms