RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Ankrd50F7BE84 1390 aa19.92■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Hoxc9P09633 260 aa19.92■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Ccar1Q8CH18 1146 aaKnown RBP19.92■□□□□ 0.78
Ldb3-208ENSMUST00000228044 TnikP83510 1323 aa19.91■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Kcnh8P59111 1102 aa19.91■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Ecm2Q5FW85 670 aa19.91■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Cabp2Q9JLK4 216 aa19.91■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Stk31Q99MW1 1018 aa19.9■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Iqcf3Q9D498 203 aa19.9■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Mbd3Q9Z2D8 285 aaKnown RBP19.9■□□□□ 0.78
Ldb3-208ENSMUST00000228044 NeflP08551 543 aa19.89■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Apbb1Q9QXJ1 710 aa19.88■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Gli3Q61602 1583 aa19.88■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Eya1P97767 591 aa19.88■□□□□ 0.77
Ldb3-208ENSMUST00000228044 GnpatP98192 678 aa19.88■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Prkrip1Q9CWV6 186 aaKnown RBP19.88■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Tet3Q8BG87 1668 aa19.87■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Ccne1Q61457 408 aa19.87■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Plin1Q8CGN5 517 aa19.87■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Kcnh5Q920E3 988 aa19.87■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Wdr43Q6ZQL4 677 aaKnown RBP19.86■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Rbm25B2RY56 838 aaKnown RBP19.86■□□□□ 0.77
Ldb3-208ENSMUST00000228044 CastP51125 788 aa19.86■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Tmem132eQ6IEE6 982 aa19.86■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Trpm3Q5F4S9 1721 aa19.85■□□□□ 0.77
Ldb3-208ENSMUST00000228044 CenpbP27790 599 aa19.84■□□□□ 0.77
Ldb3-208ENSMUST00000228044 TatQ8QZR1 454 aa19.84■□□□□ 0.77
Ldb3-208ENSMUST00000228044 NudcO35685 332 aaKnown RBP19.84■□□□□ 0.77
Ldb3-208ENSMUST00000228044 Cdc37l1Q9CZP7 335 aa19.83■□□□□ 0.76
Ldb3-208ENSMUST00000228044 DccP70211 1447 aa19.83■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Polr3glQ8R0C0 218 aa19.82■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Trim26Q99PN3 545 aa19.82■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Fmnl2A2APV2 1086 aa19.81■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Gnai1B2RSH2 354 aa19.81■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Ddx17Q501J6 650 aaKnown RBP19.81■□□□□ 0.76
Ldb3-208ENSMUST00000228044 TmpoQ61033 693 aaKnown RBP19.81■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Dzip1Q8BMD2 852 aa19.81■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Dnajc10Q9DC23 793 aa19.81■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Gnai3Q9DC51 354 aa19.81■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Ppp4r2Q0VGB7 417 aa19.8■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Brinp3Q499E0 766 aa19.8■□□□□ 0.76
Ldb3-208ENSMUST00000228044 TnrQ8BYI9 1358 aa19.8■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Arfgef2A2A5R2 1792 aa19.8■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Trim58Q5NCC9 485 aa19.79■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Dixdc1Q80Y83 711 aa19.79■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Kdm6aO70546 1401 aa19.79■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Ahnak2E9PYB0 1738 aaKnown RBP19.79■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Ccdc171E9Q1U1 1324 aa19.79■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Abca15E9PWH4 1668 aa19.78■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Rab11fip3Q8CHD8 1047 aa19.77■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Pank1Q8K4K6 548 aa19.77■□□□□ 0.76
Ldb3-208ENSMUST00000228044 Znf521Q6KAS7 1311 aa19.76■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Anp32aO35381 247 aa19.76■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Ccdc60Q8C4J0 545 aa19.75■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Sos1Q62245 1319 aa19.75■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Zmym3Q9JLM4 1370 aa19.74■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Cyb5rlB1AS42 316 aa19.74■□□□□ 0.75
Ldb3-208ENSMUST00000228044 HypkQ9CR41 129 aa19.74■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Bcl9lQ67FY2 1494 aa19.74■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Nolc1E9Q5C9 702 aaKnown RBP19.72■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Vamp4O70480 141 aa19.72■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Gsdma3Q5Y4Y6 464 aa19.72■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Tspyl2Q7TQI8 677 aa19.72■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Nid2O88322 1403 aa19.72■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Usp16Q99LG0 825 aa19.71■□□□□ 0.75
Ldb3-208ENSMUST00000228044 G3bp1P97855 465 aaKnown RBP19.71■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Amotl2Q8K371 772 aa19.71■□□□□ 0.75
Ldb3-208ENSMUST00000228044 Kdm2bQ6P1G2 1309 aa19.7■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Adgrb1Q3UHD1 1582 aa19.7■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.7■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Rtf1A2AQ19 715 aaKnown RBP19.7■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Klhdc4Q921I2 584 aa19.7■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Nol11Q8BJW5 723 aaKnown RBP19.69■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Myo5bP21271 1818 aa19.69■□□□□ 0.74
Ldb3-208ENSMUST00000228044 U2surpQ6NV83 1029 aaKnown RBP19.69■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Kif24Q6NWW5 1356 aa19.69■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Nup153E9Q3G8 1462 aaKnown RBP19.68■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Gm6268A2A3U9 297 aa19.68■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Slc4a3P16283 1227 aa19.68■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Atp10bB1AWN4 1474 aa19.67■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Gm21698A0A087WQP8 267 aa19.67■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Gm21671G3UY31 267 aa19.67■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Snap23O09044 210 aa19.67■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Nsd3Q6P2L6 1439 aa19.67■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Plekhm2Q80TQ5 1018 aa19.67■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Amotl1Q9D4H4 968 aa19.67■□□□□ 0.74
Ldb3-208ENSMUST00000228044 AampJ3QN89 436 aa19.66■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Card10P58660 1021 aa19.66■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Ppp1r37Q8BKR5 712 aa19.66■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Supt16hQ920B9 1047 aa19.66■□□□□ 0.74
Ldb3-208ENSMUST00000228044 KarsQ99MN1 595 aaKnown RBP19.66■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Senp3Q9EP97 568 aaKnown RBP19.66■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Col15a1O35206 1367 aa19.65■□□□□ 0.74
Ldb3-208ENSMUST00000228044 FocadA2AKG8 1798 aa19.65■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Ggnbp2Q5SV77 696 aa19.65■□□□□ 0.74
Ldb3-208ENSMUST00000228044 Simc1E9Q6E9 1354 aa19.64■□□□□ 0.73
Ldb3-208ENSMUST00000228044 Prim1P20664 417 aa19.64■□□□□ 0.73
Ldb3-208ENSMUST00000228044 Cavin2Q63918 418 aaKnown RBP19.64■□□□□ 0.73
Ldb3-208ENSMUST00000228044 Ppp1r3fQ9JIG4 799 aa19.64■□□□□ 0.73
Ldb3-208ENSMUST00000228044 Cadps2Q8BYR5 1297 aa19.63■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms